ReporterScore/DESCRIPTION at main · Asa12138/ReporterScore · GitHub

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Package: ReporterScore
Type: Package
Title: Generalized Reporter Score-Based Enrichment Analysis for Omics Data
Version: 0.2.6
Authors@R:
    person("Chen", "Peng", email ="bfzede@gmail.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-9449-7606"))
Description: Inspired by the classic 'RSA', we developed the improved 'Generalized Reporter
    Score-based Analysis (GRSA)' method, implemented in the R package 'ReporterScore', along
    with comprehensive visualization methods and pathway databases. 'GRSA' is a threshold-free
    method that works well with all types of biomedical features, such as genes, chemical compounds,
    and microbial species. Importantly, the 'GRSA' supports multi-group and longitudinal experimental
    designs, because of the included multi-group-compatible statistical methods.
License: GPL-3
Encoding: UTF-8
RoxygenNote: 7.3.3
Imports:
    magrittr,
    dplyr,
    stats,
    ggplot2 (>= 3.2.0),
    pcutils (>= 0.2.5),
    utils,
    scales,
    ggnewscale,
    ggrepel,
    reshape2,
    stringr,
    foreach
Suggests:
    knitr,
    rmarkdown,
    plyr,
    e1071,
    factoextra,
    snow,
    doSNOW,
    pheatmap,
    readr,
    R.utils,
    KEGGREST,
    ggkegg,
    clusterProfiler,
    enrichplot,
    pathview,
    GSA,
    vegan,
    MetaNet,
    igraph,
    ggraph,
    PADOG,
    safe,
    rSEA,
    GSVA
Depends:
    R (>= 4.2.0)
VignetteBuilder: knitr
BugReports: https://github.com/Asa12138/ReporterScore/issues
URL: https://github.com/Asa12138/ReporterScore