- added
RSA_by_mgfunction <2026-03-24, Tue> plot_reportfunction for multi-groups result <2026-03-24, Tue>
- move
calculate_NS,update_all_pathway_NS,calculate_ZN_scorefunction to a new package TWICE <2026-02-20, Fri>
- added
calculate_NS,update_all_pathway_NS,calculate_ZN_scorefunction <2025-06-20, Fri>
- added
plot_pathway_net,pathway_net_indexfunction <2025-05-27, Tue> - added
update_pathway_xml_ls,c_net_from_pathway_xmlfunction <2025-05-27, Tue> - added
load_CARDinfo,load_CAZy_info, andload_Enzyme_infofunctinos. <2025-03-24, Mon>
- fixed
load_org_pathwayfunction <2024-11-28, Thu> - fixed issue #8 <2024-09-27, Fri>
- fixed the filepath problem ':' in Windows, issue #6. <2024-09-14, Sat>
- add README_zh_CN.md <2024-08-20, Tue>
- add
export_report_tablefunction <2024-08-20, Tue>
- fixed the
ko.testfor one sample group <2024-06-25, Tue>
- added
kos_descriptionargument forplot_features_network()<2024-06-25, Tue>
- added citation information <2024-06-03, Mon>
- fixed
up_level_KOas level3_name would be duplicated <2024-04-10, Wed> - fixed
load_CPDlist()as no return <2024-04-08, Mon> - fixed
get_modulelist()as the third argument isgene<2024-04-07, Sun>
- added
combine_rs_res()for combining the results of 'step by step GRSA' toreporterscoreobject <2024-04-08, Mon> - method can be 'none' in
ko.test(), and return a NA pvalue <2024-04-08, Mon>
- add the
KO_gsva(),KO_sea(),KO_safe()andKO_padog(). <2024-01-19, Fri>
- add the
plot_KOs_network()asMetaNetis available on CRAN <2024-01-15>
- revise and re-submit to CRAN <2024-01-12>
- available on CRAN https://CRAN.R-project.org/package=ReporterScore <2024-01-12>
- fixed R CMD check and Bioc check <2023-12-29>
- submit to CRAN <2024-01-10, Wed>