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Installation with mamba/conda not working #47

@zoccoler

Description

@zoccoler

When installing with conda like this (on Windows 10 using Miniforge Prompt):

conda create -n napari-crop-env python=3.9
conda activate napari-crop-env
conda install -c conda-forge napari napari-crop

the environment never solves itself.

When creating with mamba:

mamba create -n napari-crop-env python=3.9
mamba activate napari-crop-env
mamba install napari-crop

The packages are installed, but when one calls napari from the prompt, this error shows up:

C:\Users\mazo260d\mambaforge\envs\napari-crop-env\lib\site-packages\scipy\__init__.py:155: UserWarning: A NumPy version >=1.18.5 and <1.25.0 is required for this version of SciPy (detected version 1.25.0
  warnings.warn(f"A NumPy version >={np_minversion} and <{np_maxversion}"
Traceback (most recent call last):
  File "C:\Users\mazo260d\mambaforge\envs\napari-crop-env\Scripts\napari-script.py", line 5, in <module>
    from napari.__main__ import main
  File "C:\Users\mazo260d\mambaforge\envs\napari-crop-env\lib\site-packages\napari\__main__.py", line 16, in <module>
    from .utils.translations import trans
  File "C:\Users\mazo260d\mambaforge\envs\napari-crop-env\lib\site-packages\napari\utils\__init__.py", line 2, in <module>
    from .colormaps import Colormap
  File "C:\Users\mazo260d\mambaforge\envs\napari-crop-env\lib\site-packages\napari\utils\colormaps\__init__.py", line 2, in <module>
    from .colormap import Colormap
  File "C:\Users\mazo260d\mambaforge\envs\napari-crop-env\lib\site-packages\napari\utils\colormaps\colormap.py", line 9, in <module>
    from ..events import EventedModel
  File "C:\Users\mazo260d\mambaforge\envs\napari-crop-env\lib\site-packages\napari\utils\events\__init__.py", line 15, in <module>
    from .evented_model import EventedModel
  File "C:\Users\mazo260d\mambaforge\envs\napari-crop-env\lib\site-packages\napari\utils\events\evented_model.py", line 66, in <module>
    class EventedMetaclass(main.ModelMetaclass):
  File "C:\Users\mazo260d\mambaforge\envs\napari-crop-env\lib\site-packages\pydantic\_migration.py", line 289, in wrapper
    raise AttributeError(f'module {__name__!r} has no attribute {name!r}')
AttributeError: module 'pydantic._migration' has no attribute 'ModelMetaclass'

Here are the packages installed in the environment created with mamba:

Click me
# packages in environment at C:\Users\mazo260d\mambaforge\envs\napari-crop-env:
#
# Name                    Version                   Build  Channel
alabaster                 0.7.13             pyhd8ed1ab_0    conda-forge
annotated-types           0.5.0              pyhd8ed1ab_0    conda-forge
aom                       3.5.0                h63175ca_0    conda-forge
app-model                 0.1.4              pyhd8ed1ab_0    conda-forge
appdirs                   1.4.4              pyh9f0ad1d_0    conda-forge
asciitree                 0.3.3                      py_2    conda-forge
asttokens                 2.2.1              pyhd8ed1ab_0    conda-forge
attrs                     23.1.0             pyh71513ae_1    conda-forge
autopep8                  2.0.2              pyhd8ed1ab_0    conda-forge
aws-c-auth                0.6.28               habb20d3_5    conda-forge
aws-c-cal                 0.5.27               hc655790_0    conda-forge
aws-c-common              0.8.20               hcfcfb64_0    conda-forge
aws-c-compression         0.2.17               h0a579c1_0    conda-forge
aws-c-event-stream        0.3.0                h92d84d2_6    conda-forge
aws-c-http                0.7.8                haeac8d2_4    conda-forge
aws-c-io                  0.13.26              hf956cbd_0    conda-forge
aws-c-mqtt                0.8.13               h73587ab_2    conda-forge
aws-c-s3                  0.3.4                h26b4012_5    conda-forge
aws-c-sdkutils            0.1.10               h0a579c1_0    conda-forge
aws-checksums             0.1.16               h0a579c1_0    conda-forge
aws-crt-cpp               0.20.2               h0db1998_9    conda-forge
aws-sdk-cpp               1.10.57             ha442f66_14    conda-forge
babel                     2.12.1             pyhd8ed1ab_1    conda-forge
backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
backports                 1.0                pyhd8ed1ab_3    conda-forge
backports.functools_lru_cache 1.6.5              pyhd8ed1ab_0    conda-forge
blosc                     1.21.4               hdccc3a2_0    conda-forge
bokeh                     3.2.0              pyhd8ed1ab_0    conda-forge
brotli-python             1.0.9            py39h99910a6_9    conda-forge
bzip2                     1.0.8                h8ffe710_4    conda-forge
c-ares                    1.19.1               hcfcfb64_0    conda-forge
c-blosc2                  2.9.3                h183a6f4_0    conda-forge
ca-certificates           2023.5.7             h56e8100_0    conda-forge
cachey                    0.2.1              pyh9f0ad1d_0    conda-forge
certifi                   2023.5.7           pyhd8ed1ab_0    conda-forge
cfitsio                   4.2.0                h9ebe7e4_0    conda-forge
charls                    2.4.2                h1537add_0    conda-forge
charset-normalizer        3.1.0              pyhd8ed1ab_0    conda-forge
click                     8.1.3           win_pyhd8ed1ab_2    conda-forge
cloudpickle               2.2.1              pyhd8ed1ab_0    conda-forge
colorama                  0.4.6              pyhd8ed1ab_0    conda-forge
comm                      0.1.3              pyhd8ed1ab_0    conda-forge
contourpy                 1.1.0            py39h1f6ef14_0    conda-forge
cytoolz                   0.12.0           py39ha55989b_1    conda-forge
dask                      2023.6.1           pyhd8ed1ab_0    conda-forge
dask-core                 2023.6.1           pyhd8ed1ab_0    conda-forge
dav1d                     1.2.1                hcfcfb64_0    conda-forge
debugpy                   1.6.7            py39h99910a6_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
distributed               2023.6.1           pyhd8ed1ab_0    conda-forge
docstring_parser          0.15               pyhd8ed1ab_0    conda-forge
docutils                  0.17.1           py39hcbf5309_3    conda-forge
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
executing                 1.2.0              pyhd8ed1ab_0    conda-forge
fasteners                 0.17.3             pyhd8ed1ab_0    conda-forge
freetype                  2.12.1               h546665d_1    conda-forge
freetype-py               2.4.0              pyhd8ed1ab_0    conda-forge
fsspec                    2023.6.0           pyh1a96a4e_0    conda-forge
gettext                   0.21.1               h5728263_0    conda-forge
giflib                    5.2.1                h64bf75a_3    conda-forge
glib                      2.76.3               h12be248_0    conda-forge
glib-tools                2.76.3               h12be248_0    conda-forge
gst-plugins-base          1.22.4               h001b923_0    conda-forge
gstreamer                 1.22.4               hb4038d2_0    conda-forge
heapdict                  1.0.1                      py_0    conda-forge
hsluv                     5.0.2              pyh44b312d_0    conda-forge
icu                       72.1                 h63175ca_0    conda-forge
idna                      3.4                pyhd8ed1ab_0    conda-forge
imagecodecs               2023.1.23        py39hd475b99_2    conda-forge
imageio                   2.31.1             pyh24c5eb1_0    conda-forge
imagesize                 1.4.1              pyhd8ed1ab_0    conda-forge
importlib-metadata        6.7.0              pyha770c72_0    conda-forge
importlib_metadata        6.7.0                hd8ed1ab_0    conda-forge
importlib_resources       5.12.0             pyhd8ed1ab_0    conda-forge
in-n-out                  0.1.7              pyhd8ed1ab_0    conda-forge
intel-openmp              2023.1.0         h57928b3_46319    conda-forge
ipykernel                 6.23.3             pyh6817e22_0    conda-forge
ipython                   8.14.0             pyh08f2357_0    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
jedi                      0.18.2             pyhd8ed1ab_0    conda-forge
jinja2                    3.1.2              pyhd8ed1ab_1    conda-forge
jsonschema                4.17.3             pyhd8ed1ab_0    conda-forge
jupyter_client            8.3.0              pyhd8ed1ab_0    conda-forge
jupyter_core              5.3.1            py39hcbf5309_0    conda-forge
jxrlib                    1.1                  h8ffe710_2    conda-forge
kiwisolver                1.4.4            py39h1f6ef14_1    conda-forge
krb5                      1.20.1               heb0366b_0    conda-forge
lazy_loader               0.2                pyhd8ed1ab_0    conda-forge
lcms2                     2.15                 h3e3b177_1    conda-forge
lerc                      4.0.0                h63175ca_0    conda-forge
libabseil                 20230125.3      cxx17_h63175ca_0    conda-forge
libaec                    1.0.6                h63175ca_1    conda-forge
libarrow                  12.0.1           hbf49b3f_2_cpu    conda-forge
libavif                   0.11.1               ha7b97ba_2    conda-forge
libblas                   3.9.0              17_win64_mkl    conda-forge
libbrotlicommon           1.0.9                hcfcfb64_9    conda-forge
libbrotlidec              1.0.9                hcfcfb64_9    conda-forge
libbrotlienc              1.0.9                hcfcfb64_9    conda-forge
libcblas                  3.9.0              17_win64_mkl    conda-forge
libclang                  15.0.7          default_h77d9078_2    conda-forge
libclang13                15.0.7          default_h77d9078_2    conda-forge
libcrc32c                 1.1.2                h0e60522_0    conda-forge
libcurl                   8.1.2                h68f0423_0    conda-forge
libdeflate                1.18                 hcfcfb64_0    conda-forge
libevent                  2.1.12               h3671451_1    conda-forge
libffi                    3.4.2                h8ffe710_5    conda-forge
libglib                   2.76.3               he8f3873_0    conda-forge
libgoogle-cloud           2.12.0               hbc1b25b_1    conda-forge
libgrpc                   1.56.0               hea2d5f7_2    conda-forge
libhwloc                  2.9.1           nocuda_h15da153_6    conda-forge
libiconv                  1.17                 h8ffe710_0    conda-forge
libjpeg-turbo             2.1.5.1              hcfcfb64_0    conda-forge
liblapack                 3.9.0              17_win64_mkl    conda-forge
libogg                    1.3.4                h8ffe710_1    conda-forge
libpng                    1.6.39               h19919ed_0    conda-forge
libprotobuf               4.23.3               h1975477_0    conda-forge
libsodium                 1.0.18               h8d14728_1    conda-forge
libsqlite                 3.42.0               hcfcfb64_0    conda-forge
libssh2                   1.11.0               h7dfc565_0    conda-forge
libthrift                 0.18.1               h06f6336_2    conda-forge
libtiff                   4.5.1                h6c8260b_0    conda-forge
libutf8proc               2.8.0                h82a8f57_0    conda-forge
libvorbis                 1.3.7                h0e60522_0    conda-forge
libwebp-base              1.3.1                hcfcfb64_0    conda-forge
libxcb                    1.15                 hcd874cb_0    conda-forge
libxml2                   2.11.4               hc3477c8_0    conda-forge
libzlib                   1.2.13               hcfcfb64_5    conda-forge
libzopfli                 1.0.3                h0e60522_0    conda-forge
locket                    1.0.0              pyhd8ed1ab_0    conda-forge
lz4                       4.3.2            py39hf617134_0    conda-forge
lz4-c                     1.9.4                hcfcfb64_0    conda-forge
m2w64-gcc-libgfortran     5.3.0                         6    conda-forge
m2w64-gcc-libs            5.3.0                         7    conda-forge
m2w64-gcc-libs-core       5.3.0                         7    conda-forge
m2w64-gmp                 6.1.0                         2    conda-forge
m2w64-libwinpthread-git   5.0.0.4634.697f757               2    conda-forge
magicgui                  0.7.2              pyhd8ed1ab_0    conda-forge
markdown-it-py            3.0.0              pyhd8ed1ab_0    conda-forge
markupsafe                2.1.3            py39ha55989b_0    conda-forge
matplotlib-inline         0.1.6              pyhd8ed1ab_0    conda-forge
mdurl                     0.1.0              pyhd8ed1ab_0    conda-forge
mkl                       2022.1.0           h6a75c08_874    conda-forge
msgpack-python            1.0.5            py39h1f6ef14_0    conda-forge
msys2-conda-epoch         20160418                      1    conda-forge
mypy_extensions           1.0.0              pyha770c72_0    conda-forge
napari                    0.4.17          pyh275ddea_0_pyqt    conda-forge
napari-console            0.0.8              pyhd8ed1ab_0    conda-forge
napari-crop               0.1.9              pyhd8ed1ab_0    conda-forge
napari-plugin-engine      0.2.0              pyhd8ed1ab_2    conda-forge
napari-svg                0.1.10             pyhd8ed1ab_0    conda-forge
napari-tools-menu         0.1.19             pyhd8ed1ab_0    conda-forge
napari-workflows          0.2.9              pyhd8ed1ab_0    conda-forge
nest-asyncio              1.5.6              pyhd8ed1ab_0    conda-forge
networkx                  3.1                pyhd8ed1ab_0    conda-forge
npe2                      0.6.2              pyhd8ed1ab_0    conda-forge
numcodecs                 0.11.0           py39h99910a6_1    conda-forge
numpy                     1.25.0           py39h816b6a6_0    conda-forge
numpydoc                  1.5.0              pyhd8ed1ab_0    conda-forge
openjpeg                  2.5.0                ha2aaf27_2    conda-forge
openssl                   3.1.1                hcfcfb64_1    conda-forge
orc                       1.9.0                hf2b8f0d_1    conda-forge
packaging                 23.1               pyhd8ed1ab_0    conda-forge
pandas                    2.0.3            py39h1679cfb_0    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
partd                     1.4.0              pyhd8ed1ab_0    conda-forge
pcre2                     10.40                h17e33f8_0    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    10.0.0           py39ha9166d5_0    conda-forge
pint                      0.22               pyhd8ed1ab_1    conda-forge
pip                       23.1.2             pyhd8ed1ab_0    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_0    conda-forge
platformdirs              3.8.0              pyhd8ed1ab_0    conda-forge
ply                       3.11                       py_1    conda-forge
pooch                     1.7.0              pyha770c72_3    conda-forge
prompt-toolkit            3.0.38             pyha770c72_0    conda-forge
prompt_toolkit            3.0.38               hd8ed1ab_0    conda-forge
psutil                    5.9.5            py39ha55989b_0    conda-forge
psygnal                   0.9.0              pyhd8ed1ab_0    conda-forge
pthread-stubs             0.4               hcd874cb_1001    conda-forge
pthreads-win32            2.9.1                hfa6e2cd_3    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
pyarrow                   12.0.1          py39hca4e8af_2_cpu    conda-forge
pycodestyle               2.10.0             pyhd8ed1ab_0    conda-forge
pydantic                  2.0              py39ha55989b_0    conda-forge
pydantic-core             2.0.1            py39hf21820d_0    conda-forge
pygments                  2.15.1             pyhd8ed1ab_0    conda-forge
pyopengl                  3.1.6              pyhd8ed1ab_1    conda-forge
pyproject_hooks           1.0.0              pyhd8ed1ab_0    conda-forge
pyqt                      5.15.7           py39hb77abff_3    conda-forge
pyqt5-sip                 12.11.0          py39h99910a6_3    conda-forge
pyrsistent                0.19.3           py39ha55989b_0    conda-forge
pysocks                   1.7.1              pyh0701188_6    conda-forge
python                    3.9.16          h4de0772_0_cpython    conda-forge
python-build              0.10.0             pyhd8ed1ab_1    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-tzdata             2023.3             pyhd8ed1ab_0    conda-forge
python_abi                3.9                      3_cp39    conda-forge
pytomlpp                  1.0.13           py39h1f6ef14_0    conda-forge
pytz                      2023.3             pyhd8ed1ab_0    conda-forge
pywavelets                1.4.1            py39hc266a54_0    conda-forge
pywin32                   304              py39h99910a6_2    conda-forge
pyyaml                    6.0              py39ha55989b_5    conda-forge
pyzmq                     25.1.0           py39hea35a22_0    conda-forge
qt-main                   5.15.8              h2c8576c_14    conda-forge
qtconsole-base            5.4.3              pyha770c72_0    conda-forge
qtpy                      2.3.1              pyhd8ed1ab_0    conda-forge
re2                       2023.03.02           hd4eee63_0    conda-forge
requests                  2.31.0             pyhd8ed1ab_0    conda-forge
rich                      13.4.2             pyhd8ed1ab_0    conda-forge
scikit-image              0.20.0           py39h1679cfb_1    conda-forge
scipy                     1.9.1            py39h316f440_0    conda-forge
setuptools                68.0.0             pyhd8ed1ab_0    conda-forge
shellingham               1.5.1              pyhd8ed1ab_0    conda-forge
sip                       6.7.9            py39h99910a6_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
snappy                    1.1.10               hfb803bf_0    conda-forge
snowballstemmer           2.2.0              pyhd8ed1ab_0    conda-forge
sortedcontainers          2.4.0              pyhd8ed1ab_0    conda-forge
sphinx                    4.5.0              pyh6c4a22f_0    conda-forge
sphinxcontrib-applehelp   1.0.4              pyhd8ed1ab_0    conda-forge
sphinxcontrib-devhelp     1.0.2                      py_0    conda-forge
sphinxcontrib-htmlhelp    2.0.1              pyhd8ed1ab_0    conda-forge
sphinxcontrib-jsmath      1.0.1                      py_0    conda-forge
sphinxcontrib-qthelp      1.0.3                      py_0    conda-forge
sphinxcontrib-serializinghtml 1.1.5              pyhd8ed1ab_2    conda-forge
stack_data                0.6.2              pyhd8ed1ab_0    conda-forge
superqt                   0.4.1              pyhd8ed1ab_0    conda-forge
tbb                       2021.9.0             h91493d7_0    conda-forge
tblib                     1.7.0              pyhd8ed1ab_0    conda-forge
tifffile                  2023.4.12          pyhd8ed1ab_0    conda-forge
tk                        8.6.12               h8ffe710_0    conda-forge
toml                      0.10.2             pyhd8ed1ab_0    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
toolz                     0.12.0             pyhd8ed1ab_0    conda-forge
tornado                   6.3.2            py39ha55989b_0    conda-forge
tqdm                      4.65.0             pyhd8ed1ab_1    conda-forge
traitlets                 5.9.0              pyhd8ed1ab_0    conda-forge
typer                     0.9.0              pyhd8ed1ab_0    conda-forge
typing-extensions         4.7.1                hd8ed1ab_0    conda-forge
typing_extensions         4.7.1              pyha770c72_0    conda-forge
tzdata                    2023c                h71feb2d_0    conda-forge
ucrt                      10.0.22621.0         h57928b3_0    conda-forge
urllib3                   2.0.3              pyhd8ed1ab_1    conda-forge
vc                        14.3                h64f974e_17    conda-forge
vc14_runtime              14.36.32532         hfdfe4a8_17    conda-forge
vispy                     0.11.0           py39hc266a54_1    conda-forge
vs2015_runtime            14.36.32532         h05e6639_17    conda-forge
wcwidth                   0.2.6              pyhd8ed1ab_0    conda-forge
wheel                     0.40.0             pyhd8ed1ab_0    conda-forge
win_inet_pton             1.1.0              pyhd8ed1ab_6    conda-forge
wrapt                     1.15.0           py39ha55989b_0    conda-forge
xorg-libxau               1.0.11               hcd874cb_0    conda-forge
xorg-libxdmcp             1.1.3                hcd874cb_0    conda-forge
xyzservices               2023.5.0           pyhd8ed1ab_1    conda-forge
xz                        5.2.6                h8d14728_0    conda-forge
yaml                      0.2.5                h8ffe710_2    conda-forge
zarr                      2.15.0             pyhd8ed1ab_0    conda-forge
zeromq                    4.3.4                h0e60522_1    conda-forge
zfp                       1.0.0                h63175ca_3    conda-forge
zict                      3.0.0              pyhd8ed1ab_0    conda-forge
zipp                      3.15.0             pyhd8ed1ab_0    conda-forge
zlib-ng                   2.0.7                hcfcfb64_0    conda-forge
zstd                      1.5.2                h12be248_6    conda-forge

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