mirBottleneck

[MarkBarsoumMarkarian]

Package: mirBottleneck
Version: 0.99.0
Repository: https://github.com/MarkBarsoumMarkarian/mirBottleneck

[bioc-issue-bot]

Dear @MarkBarsoumMarkarian,

The package DESCRIPTION must contain valid biocViews.

The following are not valid biocViews terms and should be removed
Pancreas
If you would like to request a term be added please email the
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why and where in the hierarchy you think it should be added.

Please fix your DESCRIPTION. See current biocViews
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[bioc-issue-bot]

Hi @MarkBarsoumMarkarian

Thanks for submitting your package. We are taking a quick
look at it and you will hear back from us soon.

The DESCRIPTION file for this package is:

Package: mirBottleneck
Title: miRNA Bottleneck Scoring for Cancer Survival Prediction
Version: 0.99.0
Authors@R: person("Mark Barsoum", "Markarian",
    email = "mb.markarian@aub.edu.lb",
    role = c("aut", "cre"))
Description: Identifies miRNAs acting as transcriptome stabilizers in cancer
    using two complementary scores: variance suppression (how much a miRNA
    reduces target gene variance) and coherence induction (how much a miRNA
    coordinates target gene programs). Classifies miRNAs into silencer,
    conductor, dual, and weak categories. Computes a composite patient-level
    bottleneck index and evaluates its association with overall survival.
License: MIT + file LICENSE
URL: https://github.com/MarkBarsoumMarkarian/mirBottleneck
BugReports: https://github.com/MarkBarsoumMarkarian/mirBottleneck/issues
Depends: R (>= 4.1.0)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
Imports:
    dplyr (>= 1.0.0),
    survival (>= 3.0.0),
    multiMiR (>= 1.12.0),
    stats,
    methods
Suggests:
    maftools,
    survminer,
    testthat (>= 3.0.0),
    BiocStyle,
    knitr,
    rmarkdown
biocViews: GeneExpression, Survival, miRNA, RNASeq, Transcriptomics, BiomedicalInformatics, ImmunoOncology, Pancreas
Config/testthat/edition: 3
VignetteBuilder: knitr

[lshep]

Please resubmit keeping the new submission template that include a checklist of Bioconductor policies. You must agree to Bioconductor policies to proceed.