When colleagues were running a desk review for Uganda, they noticed issues with guids at the province level in the lab data. Several guids were missing, and upon further investigation, also found that some provinces had multiple guids. Further investigation is needed and correction to lab function or upstream function.
Run the following to replicate an example of the issue:
sirfunctions_io("read", NULL, "GID/PEB/SIR/Data/lab/cleaned_lab_data.rda") lab_data_cleaned <- clean_lab_data(lab_data, "2023-01-01", "2026-04-07", raw_data$afp) lab_data_cleaned |> dplyr::filter(prov == "KARAMOJA") |> dplyr::distinct(adm1guid)
When colleagues were running a desk review for Uganda, they noticed issues with guids at the province level in the lab data. Several guids were missing, and upon further investigation, also found that some provinces had multiple guids. Further investigation is needed and correction to lab function or upstream function.
Run the following to replicate an example of the issue:
sirfunctions_io("read", NULL, "GID/PEB/SIR/Data/lab/cleaned_lab_data.rda") lab_data_cleaned <- clean_lab_data(lab_data, "2023-01-01", "2026-04-07", raw_data$afp) lab_data_cleaned |> dplyr::filter(prov == "KARAMOJA") |> dplyr::distinct(adm1guid)