Can improve the code in run_primer_blastn() to deal with if the binary is in the PATH or a user supplied path. Currently the code is copied for each instance, but one has an extra "-num_alignments", "10000000",.
Goal is to have 1 system2() call, where the command is build given what we know about the PATH or a user supplied path
Can improve the code in
run_primer_blastn()to deal with if the binary is in the PATH or a user supplied path. Currently the code is copied for each instance, but one has an extra"-num_alignments", "10000000",.Goal is to have 1
system2()call, where the command is build given what we know about the PATH or a user supplied path