Welcome to the guidelines for submission, updates and retrieval for the Collaborative OPen Omics project. Please use the links to find instructions specific to your needs.
.. toctree:: :caption: Getting Started :name: getting-started-section about/overview about/project-affiliations about/sample-managers-guidelines
.. toctree:: :caption: Profiles :name: profiles-section profile/profile-types profile/sharing-profiles profile/sorting-profiles
.. toctree:: :caption: Data Submissions :name: submissions-section submissions/data-files submissions/samples submissions/reads submissions/assemblies submissions/biodata/single-cell-submissions submissions/sequence-annotations submissions/tol/barcoding-submissions submissions/images/overview submissions/permits submissions/data-download submissions/publishing-data
.. toctree:: :caption: Data Updates :name: data-updates-section updates/profiles updates/data-updates updates/adding-child-projects
.. toctree:: :caption: Data Discovery & Retrieval :name: data-discovery-retrieval-section retrieval/manifest_templates discovery/manifest-wizard retrieval/accessions discovery/tol-dashboard discovery/data-statistics retrieval/copo-api
.. toctree:: :caption: Advanced :name: advanced-section advanced/project-setup/project-local-setup-index advanced/project-setup/project-application-structure.rst advanced/admin-interface
.. toctree:: :caption: Policies :name: policies-section policies/citation policies/fair-data-principles policies/licence policies/terms-of-use policies/privacy-notice policies/code-of-conduct
.. toctree:: :caption: Help :name: help-section :maxdepth: 2 help/contact help/faq help/glossary
.. toctree:: :caption: Research Outputs & Presentations :name: research-outputs-and-presentations-section :maxdepth: 2 presentations/presentation-materials contributions/publications