ProteinStructure-OOD/form.yml.erb at main · EpiGenomicsCode/ProteinStructure-OOD · GitHub

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---
title: "Protein Prediction"
cluster:
  - rc
  - 2e

form:
  - session_type
  - auto_accounts
  - auto_queues
  - working_directory
  - protein_sequence
  - agree_terms
  - bc_email_on_started

attributes:
  session_type:
    label: "Protein Prediction Engine"
    help: "Note: ESMFold and RFDiffusion will be coming soon"
    widget: select
    options:
      - ["AlphaFold 2", "AlphaFold 2", data-hide-agree-terms: true, data-set-agree-terms: true]
      - ["AlphaFold 3", "AlphaFold 3", data-hide-agree-terms: false, data-set-agree-terms: false]

  auto_accounts:
    label: "GPU Account"
    help: "Note: Account with access to GPU resources required"

  protein_sequence:
    widget: text_area
    label: "Input Sequence"
    help: "Enter the input sequence"

  agree_terms:
    label: "I agree to Google's Terms of Service"
    widget: check_box
    help: "<a href=\"https://github.com/google-deepmind/alphafold3/blob/main/WEIGHTS_TERMS_OF_USE.md\" target=\"_blank\">Read the terms</a>"
    required: true

  working_directory:
    label: "Working Directory"
    help: "Output files will be saved here (scratch space recommended)"
    widget: "path_selector"
    show_files: false
    value: "/scratch/<%= ENV['USER'] %>"

  bc_email_on_started:
    label: "I would like to receive an email when the session starts and completes"