Construct metacell with existing graph

[ChenWeiyan]

Hi,

Thanks for the nice method!

I have a fairly large multiome data which cannot fit in Seurat + Signac R framework. I have previously done the WNN integration and annotation etc in python. So I am wondering if it is possible to work around the preprocessing steps and only input my post-WNN graph for SuperCell? Say something like SCimplify_from_embedding but for a igraph object?

Otherwise it is also fine for me to modify your code to proceed, but I would really appreciate it if you already have something for this :)

Thanks,
Weiyan