diff --git a/analysis/12_plot_samples.R b/analysis/12_plot_samples.R index d335210..cd10b75 100644 --- a/analysis/12_plot_samples.R +++ b/analysis/12_plot_samples.R @@ -18,7 +18,7 @@ library(here) library(STAVE) # read in combined STAVE object -s <- readRDS(here("analysis", "data-out", "stave_data_2026.03.08.rds")) +s <- readRDS(here("analysis", "data-out", "stave_data_2026.03.13.rds")) # get WHO positions k13_dictionary <- read.csv(here("analysis", "data-raw", "k13_ref_protein_codon_dictionary.csv")) |> diff --git a/analysis/data-derived/geoff_STAVE.rds b/analysis/data-derived/geoff_STAVE.rds index 58ef0dc..b9a49b1 100644 Binary files a/analysis/data-derived/geoff_STAVE.rds and b/analysis/data-derived/geoff_STAVE.rds differ diff --git a/analysis/data-out/stave_data_2026.03.13.rds b/analysis/data-out/stave_data_2026.03.13.rds index b43fe7b..7444b41 100644 Binary files a/analysis/data-out/stave_data_2026.03.13.rds and b/analysis/data-out/stave_data_2026.03.13.rds differ