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Package: SpatialViewer
Title: Interactive Spatial Transcriptomics Viewer for Seurat Objects
Version: 0.1.0
Authors@R: person("Frederik", "Stihler", email = "frederik.stihler@berkeley.edu",
role = c("aut", "cre"))
Description: Launches an interactive Shiny application for exploring spatial
transcriptomics data stored in Seurat objects. Supports cell-level
visualization of spatial coordinates, dimensionality reduction embeddings,
metadata, and gene expression with optional polygon overlays.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends:
R (>= 4.4.0)
Imports:
shiny,
plotly,
RColorBrewer,
viridis,
colourpicker,
ggplot2,
Seurat (>= 5.0.0),
data.table,
R.utils,
shinyFiles,
Matrix,
scales