deploy: e9b2204

Author: LCrossman

graphs/branch-main/machine-github-runner/python-3.12/bench_pipeline.PipelineSuite.peakmem_process_all.json

@@ -1 +1 @@
-[[211, 56750080.0]]
+[[213, 57008128.0]]

graphs/branch-main/machine-github-runner/python-3.12/bench_pipeline.PipelineSuite.time_process_all.json

@@ -1 +1 @@
-[[211, 0.6694303490000095]]
+[[213, 0.6859838829999916]]

graphs/branch-main/machine-github-runner/python-3.12/summary.json

@@ -1 +1 @@
-[{"name": "bench_pipeline.PipelineSuite.peakmem_process_all", "idx": null, "pretty_name": "bench_pipeline.PipelineSuite.peakmem_process_all", "last_rev": 211, "last_value": 56750080.0, "last_err": 0.0, "prev_value": null, "change_rev": null}, {"name": "bench_pipeline.PipelineSuite.time_process_all", "idx": null, "pretty_name": "bench_pipeline.PipelineSuite.time_process_all", "last_rev": 211, "last_value": 0.6694303490000095, "last_err": 0.0, "prev_value": null, "change_rev": null}]
+[{"name": "bench_pipeline.PipelineSuite.peakmem_process_all", "idx": null, "pretty_name": "bench_pipeline.PipelineSuite.peakmem_process_all", "last_rev": 213, "last_value": 57008128.0, "last_err": 0.0, "prev_value": null, "change_rev": null}, {"name": "bench_pipeline.PipelineSuite.time_process_all", "idx": null, "pretty_name": "bench_pipeline.PipelineSuite.time_process_all", "last_rev": 213, "last_value": 0.6859838829999916, "last_err": 0.0, "prev_value": null, "change_rev": null}]

graphs/summary/bench_pipeline.PipelineSuite.peakmem_process_all.json

@@ -1 +1 @@
-[[211, 56750080.0]]
+[[213, 57008128.0]]

graphs/summary/bench_pipeline.PipelineSuite.time_process_all.json

@@ -1 +1 @@
-[[211, 0.6694303490000095]]
+[[213, 0.6859838829999916]]

index.json

@@ -1 +1 @@
-{"project": "microbiorust", "project_url": "https://github.com/LCrossman/microBioRust/microbiorust-py", "show_commit_url": "https://github.com/LCrossman/microBioRust/microbiorust-py/commit/", "hash_length": 8, "revision_to_hash": {"211": "dd98d7cc39aeb8de5799526d8065236d3107ca39"}, "revision_to_date": {"211": 1763479884000}, "params": {"machine": ["github-runner"], "python": ["3.12"], "branch": ["main"]}, "graph_param_list": [{"machine": "github-runner", "python": "3.12", "branch": "main"}], "benchmarks": {"bench_pipeline.PipelineSuite.peakmem_process_all": {"code": "class PipelineSuite:\n    def peakmem_process_all(self):\n    \n        _ = microbiorust.gbk_to_faa_count(self.filepath)\n\n    def setup(self):\n        bench_dir = os.path.dirname(__file__)\n    \n        # 2. Join it with the test filename\n        self.filepath = os.path.join(bench_dir, \"Rhiz3841.gbk.gb\")\n    \n        # Check if it exists just to be safe (helps debugging)\n        if not os.path.exists(self.filepath):\n            raise FileNotFoundError(f\"Could not find benchmark file at: {self.filepath}\")", "name": "bench_pipeline.PipelineSuite.peakmem_process_all", "param_names": [], "params": [], "type": "peakmemory", "unit": "bytes", "version": "2bc01aab81b57636e9d1a496a4d4c8c5679c276c8df8399d6607f93caccc652c"}, "bench_pipeline.PipelineSuite.time_process_all": {"code": "class PipelineSuite:\n    def time_process_all(self):\n        # This calls the microBioRust function that returns a count of protein fasta per file\n    \n        _ = microbiorust.gbk_to_faa_count(self.filepath)\n\n    def setup(self):\n        bench_dir = os.path.dirname(__file__)\n    \n        # 2. Join it with the test filename\n        self.filepath = os.path.join(bench_dir, \"Rhiz3841.gbk.gb\")\n    \n        # Check if it exists just to be safe (helps debugging)\n        if not os.path.exists(self.filepath):\n            raise FileNotFoundError(f\"Could not find benchmark file at: {self.filepath}\")", "min_run_count": 2, "name": "bench_pipeline.PipelineSuite.time_process_all", "number": 0, "param_names": [], "params": [], "repeat": 0, "rounds": 2, "sample_time": 0.01, "type": "time", "unit": "seconds", "version": "e39df251e3db676723d001ec967e5ab9d047c3112f8cf870155877d0f9df3f0a", "warmup_time": -1}}, "machines": {"github-runner": {"machine": "github-runner", "version": 1}}, "tags": {}, "pages": [["", "Grid view", "Display as a agrid"], ["summarylist", "List view", "Display as a list"], ["regressions", "Show regressions", "Display information about recent regressions"]]}
+{"project": "microbiorust", "project_url": "https://github.com/LCrossman/microBioRust/microbiorust-py", "show_commit_url": "https://github.com/LCrossman/microBioRust/microbiorust-py/commit/", "hash_length": 8, "revision_to_hash": {"213": "e9b22049fba0ef913a7ca50ec36563a07eb67e1f"}, "revision_to_date": {"213": 1763480494000}, "params": {"machine": ["github-runner"], "python": ["3.12"], "branch": ["main"]}, "graph_param_list": [{"machine": "github-runner", "python": "3.12", "branch": "main"}], "benchmarks": {"bench_pipeline.PipelineSuite.peakmem_process_all": {"code": "class PipelineSuite:\n    def peakmem_process_all(self):\n    \n        _ = microbiorust.gbk_to_faa_count(self.filepath)\n\n    def setup(self):\n        bench_dir = os.path.dirname(__file__)\n    \n        # 2. Join it with the test filename\n        self.filepath = os.path.join(bench_dir, \"Rhiz3841.gbk.gb\")\n    \n        # Check if it exists just to be safe (helps debugging)\n        if not os.path.exists(self.filepath):\n            raise FileNotFoundError(f\"Could not find benchmark file at: {self.filepath}\")", "name": "bench_pipeline.PipelineSuite.peakmem_process_all", "param_names": [], "params": [], "type": "peakmemory", "unit": "bytes", "version": "2bc01aab81b57636e9d1a496a4d4c8c5679c276c8df8399d6607f93caccc652c"}, "bench_pipeline.PipelineSuite.time_process_all": {"code": "class PipelineSuite:\n    def time_process_all(self):\n        # This calls the microBioRust function that returns a count of protein fasta per file\n    \n        _ = microbiorust.gbk_to_faa_count(self.filepath)\n\n    def setup(self):\n        bench_dir = os.path.dirname(__file__)\n    \n        # 2. Join it with the test filename\n        self.filepath = os.path.join(bench_dir, \"Rhiz3841.gbk.gb\")\n    \n        # Check if it exists just to be safe (helps debugging)\n        if not os.path.exists(self.filepath):\n            raise FileNotFoundError(f\"Could not find benchmark file at: {self.filepath}\")", "min_run_count": 2, "name": "bench_pipeline.PipelineSuite.time_process_all", "number": 0, "param_names": [], "params": [], "repeat": 0, "rounds": 2, "sample_time": 0.01, "type": "time", "unit": "seconds", "version": "e39df251e3db676723d001ec967e5ab9d047c3112f8cf870155877d0f9df3f0a", "warmup_time": -1}}, "machines": {"github-runner": {"machine": "github-runner", "version": 1}}, "tags": {}, "pages": [["", "Grid view", "Display as a agrid"], ["summarylist", "List view", "Display as a list"], ["regressions", "Show regressions", "Display information about recent regressions"]]}

info.json

@@ -1,4 +1,4 @@
 {
     "asv-version": "0.6.5",
-    "timestamp": 1763480036491
+    "timestamp": 1763480656651
 }

regressions.xml

@@ -1,2 +1,2 @@
 <?xml version='1.0' encoding='utf-8'?>
-<feed xmlns="http://www.w3.org/2005/Atom"><id>tag:microbiorust.asv,1970-01-01:/6a4627b220006ed990bff7f89d38a9b8b28d835aa1bdb166987b4449068ba2fd</id><author><name>Airspeed Velocity</name></author><title xml:lang="en">microbiorust performance regressions</title><updated>2025-11-18T15:33:56Z</updated></feed>
+<feed xmlns="http://www.w3.org/2005/Atom"><id>tag:microbiorust.asv,1970-01-01:/6a4627b220006ed990bff7f89d38a9b8b28d835aa1bdb166987b4449068ba2fd</id><author><name>Airspeed Velocity</name></author><title xml:lang="en">microbiorust performance regressions</title><updated>2025-11-18T15:44:16Z</updated></feed>

…b-runner/dd98d7cc-virtualenv-py3.12.json …b-runner/e9b22049-virtualenv-py3.12.jsonresults/github-runner/dd98d7cc-virtualenv-py3.12.json renamed to results/github-runner/e9b22049-virtualenv-py3.12.json results/github-runner/dd98d7cc-virtualenv-py3.12.json renamed to results/github-runner/e9b22049-virtualenv-py3.12.json

@@ -1 +1 @@
-{"commit_hash": "dd98d7cc39aeb8de5799526d8065236d3107ca39", "env_name": "virtualenv-py3.12", "date": 1763479884000, "params": {"machine": "github-runner", "python": "3.12"}, "python": "3.12", "requirements": {}, "env_vars": {}, "result_columns": ["result", "params", "version", "started_at", "duration", "stats_ci_99_a", "stats_ci_99_b", "stats_q_25", "stats_q_75", "stats_number", "stats_repeat", "samples", "profile"], "results": {"bench_pipeline.PipelineSuite.time_process_all": [[0.6694303490000095], [], "e39df251e3db676723d001ec967e5ab9d047c3112f8cf870155877d0f9df3f0a", 1763480032044, 8.065, [0.66186], [0.68004], [0.66404], [0.67117], [1], [10]], "bench_pipeline.PipelineSuite.peakmem_process_all": [[56750080], [], "2bc01aab81b57636e9d1a496a4d4c8c5679c276c8df8399d6607f93caccc652c", 1763480031361, 0.68331]}, "durations": {}, "version": 2}
+{"commit_hash": "e9b22049fba0ef913a7ca50ec36563a07eb67e1f", "env_name": "virtualenv-py3.12", "date": 1763480494000, "params": {"machine": "github-runner", "python": "3.12"}, "python": "3.12", "requirements": {}, "env_vars": {}, "result_columns": ["result", "params", "version", "started_at", "duration", "stats_ci_99_a", "stats_ci_99_b", "stats_q_25", "stats_q_75", "stats_number", "stats_repeat", "samples", "profile"], "results": {"bench_pipeline.PipelineSuite.time_process_all": [[0.6859838829999916], [], "e39df251e3db676723d001ec967e5ab9d047c3112f8cf870155877d0f9df3f0a", 1763480652001, 8.3247, [0.67814], [0.71197], [0.68363], [0.6953], [1], [10]], "bench_pipeline.PipelineSuite.peakmem_process_all": [[57008128], [], "2bc01aab81b57636e9d1a496a4d4c8c5679c276c8df8399d6607f93caccc652c", 1763480651286, 0.71487]}, "durations": {}, "version": 2}