refactor(lib): formart code with cargo fmt

Author: kh3rld

microbiorust-py/src/lib.rs

@@ -23,24 +23,20 @@
 //!  result = amino_percentage("MSNTQKKNVPELRFPGFEGEWEEKKLGDLTTKIGSGKTPKGGSENYTNKGIPFLRSQNIRNGKLNLNDLVYISKDIDDEMKNSRTY")
 //!  print(result)
 
-
-use pyo3::{
-   prelude::*,
-   types::PyModule,
-};
-use microBioRust::genbank;
-use std::collections::HashMap;
-use std::{
-   collections::BTreeMap,
-   io::{self, Write},
-   fs::OpenOptions,
-};
-use microBioRust::gbk::{Record, Reader, RangeValue, gff_write};
 use microBioRust::embl;
 use microBioRust::embl::gff_write as embl_gff_write;
-use microBioRust_seqmetrics::metrics::hydrophobicity as rust_hydrophobicity;
+use microBioRust::gbk::{gff_write, RangeValue, Reader, Record};
+use microBioRust::genbank;
 use microBioRust_seqmetrics::metrics::amino_counts as rust_amino_counts;
 use microBioRust_seqmetrics::metrics::amino_percentage as rust_amino_percentage;
+use microBioRust_seqmetrics::metrics::hydrophobicity as rust_hydrophobicity;
+use pyo3::{prelude::*, types::PyModule};
+use std::collections::HashMap;
+use std::{
+    collections::BTreeMap,
+    fs::OpenOptions,
+    io::{self, Write},
+};
 
 #[pyfunction]
 fn gbk_to_faa(filename: &str) -> PyResult<Vec<String>> {
@@ -62,7 +58,7 @@ fn gbk_to_faa_count(filename: &str) -> PyResult<usize> {
     let mut count = 0;
     for record in records {
         for (k, _) in &record.cds.attributes {
-                count += 1;
+            count += 1;
         }
     }
     Ok(count)
@@ -185,7 +181,7 @@ fn hydrophobicity(seq: &str, window_size: usize) -> Vec<f64> {
 #[allow(unused_imports)]
 #[allow(unused_variables)]
 #[pyfunction]
-fn amino_percentage(seq: &str) -> HashMap<char,f64> {
+fn amino_percentage(seq: &str) -> HashMap<char, f64> {
     rust_amino_percentage(seq)
 }
 
@@ -196,7 +192,6 @@ fn amino_counts(seq: &str) -> HashMap<char, u64> {
     rust_amino_counts(seq)
 }
 
-
 #[pymodule]
 fn microbiorust(py: Python, m: &Bound<'_, PyModule>) -> PyResult<()> {
     m.add_function(wrap_pyfunction!(gbk_to_faa, m)?)?;
@@ -210,7 +205,6 @@ fn microbiorust(py: Python, m: &Bound<'_, PyModule>) -> PyResult<()> {
     Ok(())
 }
 
-
 #[cfg(test)]
 mod tests {
     use crate::microbiorust;
@@ -222,10 +216,18 @@ mod tests {
         Python::with_gil(|py| {
             let m = PyModule::new(py, "microbiorust").unwrap();
             microbiorust(py, &m).unwrap();
-            for func in &["gbk_to_faa", "gbk_to_faa_count", "embl_to_faa", "gbk_to_gff", "embl_to_gff", "hydrophobicity", "amino_counts", "amino_percentage"] {
+            for func in &[
+                "gbk_to_faa",
+                "gbk_to_faa_count",
+                "embl_to_faa",
+                "gbk_to_gff",
+                "embl_to_gff",
+                "hydrophobicity",
+                "amino_counts",
+                "amino_percentage",
+            ] {
                 assert!(m.getattr(func).is_ok(), "Function {} not found", func);
             }
         });
     }
-    
 }