[FEATURE] - `lola sync` Opt out of changes to AGENTS.md

[mikemorency]

Feature Description

I would like the option for lola to not update the AGENTS.md with transient text (installed skill descriptions for example)

Problem or Use Case

As a project maintainer, I use lola sync and .lola-req to recommend AI skill modules to other developers. I also use an AGENTS.md file in the repo to provide project specific context and rules to any agent developers are using.
When I run lola sync, it injects the installed skills and some other information into the AGENTS.md. This creates some issues:

1. Since I have the file checked in, it now reports changes when skills change, or when I use a different version of a skill than someone else.
2. If a user does not use lola, the AGENTS.md file will be wrong and could cause issues.

Category

None

Proposed Solution

I like that and understand why lola injects the information into the agent context. However, I think it would be better if lola wrote that information to a different file, maybe skills/lola.md or something, and then updated the AGENTS.md with a simple redirect "Check for lola.md and read it if its present"
This option could be implemented as a cli arg. I also think it would be nice to have it in a config file (or .lola-req although im not sure it fits.) because that type of setting would be best applied project wide and not at the user level

Alternatives Considered

No response

Complexity Estimate

I don't know

Additional Context

I really only use lola sync, so I am unsure if this problem extends to other cli operations

[SecKatie]

I want to remove the AGENTS.md editing anyway. I was thinking that it would be better (if a module has an AGENTS.md) for us to ask if they want to overwrite their AGENTS.md, CLAUDE.md, GEMINI.md, etc. instead. This would probably come with a --no-instructions flag.

[mikemorency]

I think that is a good option, better than the one I suggested actually :)