DHIS2HEAT/Dockerfile.shiny at main · MERQ-Systems/DHIS2HEAT · GitHub

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FROM rocker/shiny:latest

# Install necessary system dependencies
RUN apt-get update && apt-get install -y --no-install-recommends \
    systemctl \
    nano \
    htop \
    lsof \
    inotify-tools \
    libssl-dev \
    libxml2-dev \
    libsodium23 \
    && apt-get clean && rm -rf /var/lib/apt/lists/*

# Install CRAN packages and GitHub packages in a single step to reduce layers
#RUN R -e "install.packages(c('remotes', 'shiny', 'shinyjs', 'shinyWidgets', 'shinycssloaders', 'DT', 'httr', 'jsonlite', 'openxlsx', 'plotly', 'bslib', 'arrow', 'colourpicker', 'shinydashboard', 'shinyalert', 'dplyr', 'scales', 'pastecs', 'car', 'ggfortify', 'psych', 'sqldf', 'lubridate', 'kableExtra', 'gridExtra', 'fastDummies', 'DataExplorer', 'tidyverse', 'colorspace'), dependencies = TRUE, repos = 'https://cran.r-project.org/'); \
#    remotes::install_github(c('rstudio/gridlayout', 'tidyverse/ggplot2', 'thomasp85/patchwork'))"

# Basic Install for Testing
RUN R -e "install.packages(c('remotes', 'httr'), dependencies = TRUE, repos = 'https://cran.r-project.org/')"

# Install Remote GitHub packages
RUN R -e "remotes::install_github(c('rstudio/gridlayout', 'tidyverse/ggplot2', 'thomasp85/patchwork'))"

# Copy Shiny app files to the container
COPY . /srv/shiny-server/
COPY shiny-server.conf /etc/shiny-server/shiny-server.conf

#COPY /etc/letsencrypt/live/heat.merqconsultancy.org/privkey.pem /etc/shiny-server/privkey.pem
#COPY /etc/letsencrypt/live/heat.merqconsultancy.org/fullchain.pem /etc/shiny-server/fullchain.pem


# Ensure correct permissions
RUN chown -R shiny:shiny /srv/shiny-server && chmod +x /srv/shiny-server/start_shiny_app.sh
RUN chown -R shiny:shiny /srv/shiny-server && chmod +x /srv/shiny-server/deploy_shiny_app.sh
RUN chown -R shiny:shiny /srv/shiny-server && chmod +x /srv/shiny-server/monitor_shiny_app.sh
RUN chown -R shiny:shiny /srv/shiny-server && chmod +x /srv/shiny-server/install_shiny_packages.sh


# Ensure start_shiny_app.sh and other scripts are executable
RUN chmod +x /srv/shiny-server/start_shiny_app.sh
#RUN chmod +x start_shiny_app.sh
RUN chmod +x /srv/shiny-server/deploy_shiny_app.sh
#RUN chmod +x deploy_shiny_app.sh
RUN chmod +x /srv/shiny-server/init.deploy.sh
#RUN chmod +x init.deploy.sh
RUN chmod +x /srv/shiny-server/install_shiny_packages.sh
#RUN chmod +x install_shiny_packages.sh


# Set working directory for the Shiny app
WORKDIR /srv/shiny-server

# Expose ports (3838 for the Shiny app, 3939 for the Shiny Server admin)
#EXPOSE 3838 3939 80
#EXPOSE 3939 80 443
EXPOSE 3939 80 443

# Start Shiny Server
#CMD ["./start_shiny_app.sh"]
#CMD ["./deploy_shiny_app.sh"]
#CMD ["./init.deploy.sh"]

# Start Shiny Server with chained commands
#CMD ["sh", "-c", "./deploy_shiny_app.sh && ./init.deploy.sh && ./install_shiny_packages.sh && ./start_shiny_app.sh"]

# Fast Deploy and Start with chained commands
#CMD ["sh", "-c", "./init.deploy.sh && ./install_shiny_packages.sh && ./start_shiny_app.sh"]
#CMD ["sh", "-c", "./install_shiny_packages.sh && ./init.deploy.sh && ./start_shiny_app.sh"]

# Start the Shiny app
#CMD ["R", "-e", "shiny::runApp('/srv/shiny-server/app')"]

#CMD ["sh", "-c", "init.deploy.sh"]
#CMD ["sh", "-c", "./install_shiny_packages.sh"]
#CMD ["sh", "-c", "./srv/shiny-server/install_shiny_packages.sh"]