Hi,
The code reported this error:
File "/datahome/datasets/xxx/software/CAT_pack/CAT_pack/./CAT_pack", line 101, in <module> main() ~~~~^^ File "/datahome/datasets/xxx/software/CAT_pack/CAT_pack/./CAT_pack", line 83, in main bins.run() ~~~~~~~~^^ File "/datahome/datasets/xxx/software/CAT_pack/CAT_pack/bins.py", line 405, in run check.check_whether_ORFs_are_based_on_contigs( ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ contig_names, contig2ORFs, args.log_file, args.quiet) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/datahome/datasets/xxx/software/CAT_pack/CAT_pack/check.py", line 369, in check_whether_ORFs_are_based_on_contigs "contig_name_#.".format(contig2ORFs[contig][0]) ^^^^^^ NameError: name 'contig' is not defined [2025-04-30 17:21:13] ERROR: BAT finished abnormally.
Could you please help to solve it? Thank you very much!
Hi,
The code reported this error:
File "/datahome/datasets/xxx/software/CAT_pack/CAT_pack/./CAT_pack", line 101, in <module> main() ~~~~^^ File "/datahome/datasets/xxx/software/CAT_pack/CAT_pack/./CAT_pack", line 83, in main bins.run() ~~~~~~~~^^ File "/datahome/datasets/xxx/software/CAT_pack/CAT_pack/bins.py", line 405, in run check.check_whether_ORFs_are_based_on_contigs( ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ contig_names, contig2ORFs, args.log_file, args.quiet) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/datahome/datasets/xxx/software/CAT_pack/CAT_pack/check.py", line 369, in check_whether_ORFs_are_based_on_contigs "contig_name_#.".format(contig2ORFs[contig][0]) ^^^^^^ NameError: name 'contig' is not defined [2025-04-30 17:21:13] ERROR: BAT finished abnormally.Could you please help to solve it? Thank you very much!