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Package: TwoSampleMR
Title: Two Sample MR Functions and Interface to MRC Integrative
Epidemiology Unit OpenGWAS Database
Version: 0.7.4
Authors@R: c(
person("Gibran", "Hemani", , "g.hemani@bristol.ac.uk", role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-0920-1055")),
person("Philip", "Haycock", , "philip.haycock@bristol.ac.uk", role = "aut",
comment = c(ORCID = "0000-0001-5001-3350")),
person("Jie", "Zheng", , "Jie.Zheng@bristol.ac.uk", role = "aut",
comment = c(ORCID = "0000-0002-6623-6839")),
person("Tom", "Gaunt", , "Tom.Gaunt@bristol.ac.uk", role = "aut",
comment = c(ORCID = "0000-0003-0924-3247")),
person("Ben", "Elsworth", , "Ben.Elsworth@bristol.ac.uk", role = "aut",
comment = c(ORCID = "0000-0001-7328-4233")),
person("Tom", "Palmer", , "remlapmot@hotmail.com", role = "aut",
comment = c(ORCID = "0000-0003-4655-4511")),
person("Marina", "Vabistsevits", role = "ctb",
comment = c(ORCID = "0000-0003-1121-6790"))
)
Description: A package for performing Mendelian randomization using GWAS
summary data. It uses the IEU OpenGWAS database
<https://gwas.mrcieu.ac.uk/> to automatically obtain data, and a wide
range of methods to run the analysis.
License: MIT + file LICENSE
URL: https://github.com/MRCIEU/TwoSampleMR,
https://mrcieu.github.io/TwoSampleMR/
BugReports: https://github.com/MRCIEU/TwoSampleMR/issues/
Depends:
R (>= 4.1.0)
Imports:
cowplot,
data.table,
dplyr,
ggplot2 (>= 3.4.0),
glmnet,
gridExtra,
gtable,
ieugwasr (>= 1.1.0),
jsonlite,
knitr,
lattice,
magrittr,
MASS,
MRMix,
MRPRESSO,
pbapply,
psych,
RadialMR,
reshape2,
rmarkdown
Suggests:
Cairo,
car,
markdown,
MendelianRandomization,
meta,
mr.raps,
MRInstruments,
randomForest,
testthat,
tidyr
VignetteBuilder:
knitr
Remotes:
gqi/MRMix,
mrcieu/MRInstruments,
MRPRESSO=rondolab/MR-PRESSO,
qingyuanzhao/mr.raps,
WSpiller/RadialMR
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3