bids-cat12-wrapper/.gitignore at main · MRI-Lab-Graz/bids-cat12-wrapper · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
# Byte-compiled / optimized / DLL files
__pycache__/
*.py[codz]
*$py.class
archive/
nohup*
/stats/
test_output/
demo/
.pip-cache/
# C extensions
*.so
.tools/
spm*.ps
participants.tsv
docs/_build/

# Distribution / packaging
.Python
build/
dist/
*.egg-info/
*.egg

# Virtual environment
.venv/
venv/
env/
.uv-cache/

# Visual Studio Code
.vscode/
.history/

# CAT12 BIDS Processing Pipeline Specific
# CAT12 Installation (contained in external/)
external/
*.zip
.env
*.dmg
*.pkg
*.iso


# Processing outputs
derivatives/
output/
results/
temp/

# Pipeline outputs under scripts/
scripts/stats/results/
scripts/stats/.tmp_*

# MATLAB temporary files
*.m~
*.asv

# Data files (add your own patterns)
data/
*.nii
*.nii.gz
*.dcm
*.DICOM

# Configuration overrides (keep template, ignore local configs)
config/local_config.yaml
config/*_local.yaml

# Test data
test_data/
sample_data/

# Processing logs and results
processing_*.json
processing_*.mat
cat12_*.log
cat12_stats_*.log
node_modules
.DS_Store