Release Release v0.5.0

[straussmaximilian]

Summary:

Major

File reading changed to AlphaRaw

• This allows SciEx support. FF is not yet optimized for SciEX yet
• Adjusted memory limits for raw conversion, raw conversion for Bruker is now faster
• Bruker legacy files are supported with the one-click installer but not for the Python version anymore. Install python-lzf or install with the legacy requirements,
• Working docker files

Minor

• Option to change the top_n peptides
• Option to select the initial score for ML scoring
• Fixed a bug in peptide generation that would not consider the last AA
• Added a new protease protease_dict["trypsin/p"] = "[KR]"
• Small UI improvements

Performance:

• Overall, Bruker runs should be 25% faster. We will expect further speed increases once the FF is exchanged
• IDs dropped ~5%, but FDR estimates are well below 1% now

Full Changelog: v0.4.9...v0.5.0

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This discussion was created from the release Release Release v0.5.0.