Error GLIBC_2.33' not found

[StickyDoughnut]

Hi!

I want to execute run_custom.py with a custom dataset and get the following error:

(py38) root@dwi-isaac-sim-instance-rdp5:/home/***/BundleSDF# python run_custom.py --mode run_video --video-dir /home/***/dwi_custom_data --out_folder /home/***/dwi_custom_data --use_segmenter 1 --use_gui 1 --debug_level 2
Traceback (most recent call last):
  File "run_custom.py", line 10, in <module>
    from bundlesdf import *
  File "/home/***/BundleSDF/bundlesdf.py", line 16, in <module>
    from gui import *
  File "/home/***/BundleSDF/gui.py", line 11, in <module>
    import dearpygui.dearpygui as dpg
  File "/opt/conda/envs/py38/lib/python3.8/site-packages/dearpygui/dearpygui.py", line 22, in <module>
    import dearpygui._dearpygui as internal_dpg
ImportError: /lib/x86_64-linux-gnu/libc.so.6: version `GLIBC_2.33' not found (required by /opt/conda/envs/py38/lib/python3.8/site-packages/dearpygui/_dearpygui.so)
(py38) root@dwi-isaac-sim-instance-rdp5:/home/***/BundleSDF# 

Running

strings /usr/lib/x86_64-linux-gnu/libc.so.6 | grep GLIBC
Returns:

GLIBC_2.2.5
GLIBC_2.2.6
GLIBC_2.3
GLIBC_2.3.2
GLIBC_2.3.3
GLIBC_2.3.4
GLIBC_2.4
GLIBC_2.5
GLIBC_2.6
GLIBC_2.7
GLIBC_2.8
GLIBC_2.9
GLIBC_2.10
GLIBC_2.11
GLIBC_2.12
GLIBC_2.13
GLIBC_2.14
GLIBC_2.15
GLIBC_2.16
GLIBC_2.17
GLIBC_2.18
GLIBC_2.22
GLIBC_2.23
GLIBC_2.24
GLIBC_2.25
GLIBC_2.26
GLIBC_2.27
GLIBC_2.28
GLIBC_2.29
GLIBC_2.30
GLIBC_PRIVATE
GNU C Library (Ubuntu GLIBC 2.31-0ubuntu9.18) stable release version 2.31.

I had to update the dockerfile (described here) and i had to update GLIBCXX (described here)

Now I'm stuck as I don't know how to update glibc and I couldn't find a description online.

Running apt install libc6 did not help. Also --use_gui 0 does not help.

Any ideas?

[Axiomerator]

I ran into the exact same issue as you. My solution was a bit risky: I updated glibc by adding a source of a newer version of Ubuntu. This could potentially lead to unpredictable system problems, but somehow, after doing this, I managed to get the HO3D example code running. My computer is currently in the middle of the training process, so I can't confirm if this method is fully workable yet.

Risk warning: Upgrading glibc may lead to system instability or break other dependencies. It is recommended to perform this operation only in the isolated container to avoid affecting the host system.

Run the following commands inside the docker:

echo "deb http://archive.ubuntu.com/ubuntu jammy main" >> /etc/apt/sources.list
apt update
apt install libc6 -y

[StickyDoughnut]

Thanks for the input! I tried to use a previous version of dearpygui.

So i set in the dockerfile
dearpygui==1.11.1

I also had to
pip install yacs

I used a more recent docker image (though not sure if that is related to that issue)
FROM nvidia/cuda:11.6.1-devel-ubuntu20.04

The milk example is now running on my machine.