CIPS_Net/zero_shot_analysis_summary.json at main · Nikhil-Rao20/CIPS_Net · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
{
  "pannuke_classes": {
    "0": "Neoplastic",
    "1": "Inflammatory",
    "2": "Connective_Soft_tissue",
    "3": "Dead",
    "4": "Epithelial"
  },
  "suitable_datasets": [
    "CoNIC",
    "CoNSeP",
    "MoNuSAC",
    "Lizard"
  ],
  "unsuitable_datasets": [
    "BreakHis",
    "LC25000"
  ],
  "limited_datasets": [
    "MoNuSeg"
  ],
  "class_mappings": {
    "CoNSeP": {
      "2": "Inflammatory",
      "3": "Epithelial",
      "4": "Neoplastic",
      "5": "Connective_Soft_tissue"
    },
    "CoNIC": {
      "1": "Inflammatory",
      "2": "Epithelial",
      "3": "Inflammatory",
      "4": "Inflammatory",
      "5": "Inflammatory",
      "6": "Connective_Soft_tissue"
    },
    "Lizard": {
      "1": "Inflammatory",
      "2": "Epithelial",
      "3": "Inflammatory",
      "4": "Inflammatory",
      "5": "Inflammatory",
      "6": "Connective_Soft_tissue"
    },
    "MoNuSAC": {
      "Epithelial": "Epithelial",
      "Lymphocyte": "Inflammatory",
      "Macrophage": "Inflammatory",
      "Neutrophil": "Inflammatory"
    }
  },
  "evaluation_priority": [
    {
      "dataset": "CoNIC",
      "priority": 1,
      "reason": "Easy NumPy format, 4981 patches"
    },
    {
      "dataset": "CoNSeP",
      "priority": 2,
      "reason": "HoVer-Net benchmark, has Neoplastic class"
    },
    {
      "dataset": "MoNuSAC",
      "priority": 3,
      "reason": "Multi-organ, tests generalization"
    },
    {
      "dataset": "Lizard",
      "priority": 4,
      "reason": "Large scale, requires preprocessing"
    }
  ]
}