diff --git a/.github/workflows/native-backend-ci.yml b/.github/workflows/native-backend-ci.yml index 7cf16abd..c7414763 100644 --- a/.github/workflows/native-backend-ci.yml +++ b/.github/workflows/native-backend-ci.yml @@ -40,6 +40,9 @@ jobs: - name: Run parity from committed R cache run: NNS_R_CACHE_ONLY=1 python -m pytest -q tests/parity + - name: Run plotting color-fidelity tests + run: python -m pytest -q tests/plotting + - name: Run vignette examples run: | if [ -f tests/docs/test_vignette_examples.py ]; then diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 29fd7cd3..ebbebc88 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -80,8 +80,26 @@ jobs: name: sdist path: dist/*.tar.gz - publish_testpypi: + check_metadata: needs: [build_wheels, build_sdist] + runs-on: ubuntu-latest + steps: + - uses: actions/download-artifact@v4 + with: + path: dist + merge-multiple: true + - uses: actions/setup-python@v5 + with: + python-version: "3.11" + - name: Validate metadata and README rendering (twine check) + run: | + # Pin modern tooling so PEP 639 License-Expression / Metadata 2.4 is + # recognized regardless of any preinstalled system 'packaging'. + python -m pip install -U pip "twine>=6.1" "packaging>=24.2" + python -m twine check --strict dist/* + + publish_testpypi: + needs: [build_wheels, build_sdist, check_metadata] if: github.event_name == 'workflow_dispatch' && inputs.publish == 'testpypi' runs-on: ubuntu-latest environment: testpypi @@ -97,7 +115,7 @@ jobs: repository-url: https://test.pypi.org/legacy/ publish_pypi: - needs: [build_wheels, build_sdist] + needs: [build_wheels, build_sdist, check_metadata] if: github.event_name == 'push' || (github.event_name == 'workflow_dispatch' && inputs.publish == 'pypi') runs-on: ubuntu-latest environment: pypi diff --git a/README.md b/README.md index 23a76c1c..71cde3dd 100644 --- a/README.md +++ b/README.md @@ -39,6 +39,10 @@ The public package is Python-native and does not call R at runtime. Some core ke pip install ovvo-nns ``` +This includes the matplotlib plotting API (`nns.plotting`); matplotlib is a +regular dependency and is imported lazily, so `import nns` stays light. See +[`docs/plot_parity_policy.md`](docs/plot_parity_policy.md). + Use the package as `nns`: ```python @@ -138,7 +142,7 @@ Important boundaries: - Stochastic exact stream parity is not expected because Python paths use NumPy random generation. - Factor and class ordering should be passed explicitly when ordering matters. - Direct raw-factor `nns_m_reg(..., factor_2_dummy=True)` is intentionally guarded. Use `prepare_factor_predictors(...)` before `nns_m_reg(...)`. -- Plotting arguments are generally ignored and data is returned instead. +- Compute functions' `plot` arguments are ignored and data is returned instead; visual plotting is a separate API in `nns.plotting`, color/element-faithful to R but not pixel-diffed. See [behavior conventions](docs/conventions.md) for detailed compatibility notes. diff --git a/docs/plot_parity_policy.md b/docs/plot_parity_policy.md index ee37d2f3..4ac91129 100644 --- a/docs/plot_parity_policy.md +++ b/docs/plot_parity_policy.md @@ -2,15 +2,36 @@ ## Summary -Graphics-device artifacts are **intentionally not compared** in CI parity. The -parity suite validates the **returned values** of NNS functions, never the -generated plots, PDFs, or other graphics-device output. +Graphics-device artifacts are **intentionally not pixel-compared** in CI +parity. The parity suite validates the **returned values** of NNS functions, +never byte-/pixel-identical plot, PDF, or other graphics-device output. This is a deliberate, permanent policy decision — not an unresolved migration blocker. R plotting and Python plotting use different graphics stacks, and a faithful value-level port does not require byte-identical (or pixel-identical) plot artifacts. +## A visual plotting API now exists (`nns.plotting`) + +The Python port now ships a plotting API in the `nns.plotting` subpackage. It is +**color/element-faithful to R but not pixel-diffed**: tests assert *artist +colors and which element they sit on*, never rendered images. + +- matplotlib is a regular dependency of the package (no optional extra). It is + still imported lazily inside each plot function — never at package top level — + so `import nns` stays light and does not pull matplotlib in. +- Each `plot_*` function takes an already-computed NNS result (or the same raw + inputs) plus a keyword `ax=None`, returns the `Axes`/`Figure`, and **never** + calls `plt.show()`. The compute functions' `plot=False` default behavior is + untouched; plotting is a separate opt-in call. +- Colors are pinned in `nns.plotting.palette` to the exact R `grDevices` hex + used by `tools/NNS/R/*.R`. R and matplotlib agree on `steelblue`/`red` but + **disagree** on `green` (R `#00FF00` vs mpl `#008000`) and `grey` (R `#BEBEBE` + vs mpl `#808080`); the palette pins those so the port stays faithful. +- Plotting tests live in `tests/plotting/`, run on the headless `Agg` backend, + and assert `mcolors.to_hex(...)` of line/scatter/patch artists — **no** + pixel/PDF comparison. + ## What is compared - Numeric return values (scalars, vectors, matrices, nested result dicts) from @@ -46,9 +67,9 @@ any `*.pdf`, `plot3d`, or `rgl`; the CI workflow (`.github/workflows/native-backend-ci.yml`) runs only the invariant suite, the cache-only parity suite, `ruff`, `mypy`, and `python -m build`. -## When (and only when) image comparison would be in scope +## Image comparison remains out of scope -Image or PDF comparison would only be considered if and when the Python package -grows a real, first-class plotting API that needs validation. There is no such -API today. Until one exists, no PDF/image comparison is attempted, and adding -one is explicitly out of scope. +Even though a first-class plotting API (`nns.plotting`) now exists, image or PDF +comparison is still **out of scope**. The API is validated by asserting artist +colors and the element each color sits on (faithful to R's `col=` usage), which +is sufficient for a value-level port. No PDF/image diffing is attempted. diff --git a/pyproject.toml b/pyproject.toml index 5e8c93b1..41eb3cc9 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -33,6 +33,7 @@ keywords = [ ] urls = { "Homepage" = "https://github.com/OVVO-Financial/NNS-python", "Repository" = "https://github.com/OVVO-Financial/NNS-python", "Issues" = "https://github.com/OVVO-Financial/NNS-python/issues", "Source" = "https://github.com/OVVO-Financial/NNS-python", "Project" = "https://github.com/OVVO-Financial/NNS-python" } dependencies = [ + "matplotlib>=3.7", "numpy", "scipy", ] diff --git a/src/nns/plotting/__init__.py b/src/nns/plotting/__init__.py new file mode 100644 index 00000000..9bf9f266 --- /dev/null +++ b/src/nns/plotting/__init__.py @@ -0,0 +1,69 @@ +"""matplotlib plotting API for NNS, faithful to R NNS ``plot = TRUE``. + +matplotlib ships as a regular dependency of the package, but it is imported +lazily inside each plot function so ``import nns`` stays light. + +Design contract for every ``plot_*`` function: + +* Accept an already-computed NNS result (or the same raw inputs) plus a keyword + ``ax=None`` and return the matplotlib ``Axes`` (or ``Figure`` for 3-D). +* Never call ``plt.show()`` -- the caller controls display and saving. +* Be **color/element-faithful** to R (see :mod:`nns.plotting.palette`), not + pixel-diffed. + +Colors are pinned in :mod:`nns.plotting.palette`; the only same-named colors +that must *not* be trusted from matplotlib are ``green`` (-> ``#00FF00``) and +``grey`` (-> ``#BEBEBE``). +""" + +from __future__ import annotations + +from typing import TYPE_CHECKING, Any + +from nns.plotting import palette as palette + +if TYPE_CHECKING: # pragma: no cover - typing only + from nns.plotting.anova import plot_nns_anova as plot_nns_anova + from nns.plotting.arma import plot_nns_arma as plot_nns_arma + from nns.plotting.arma import plot_nns_arma_optim as plot_nns_arma_optim + from nns.plotting.causation import plot_nns_causation as plot_nns_causation + from nns.plotting.copula import plot_nns_copula as plot_nns_copula + from nns.plotting.differentiation import plot_nns_diff as plot_nns_diff + from nns.plotting.dominance import plot_fsd as plot_fsd + from nns.plotting.dominance import plot_ssd as plot_ssd + from nns.plotting.dominance import plot_tsd as plot_tsd + from nns.plotting.normalization import plot_nns_norm as plot_nns_norm + from nns.plotting.partial_moments import plot_nns_cdf as plot_nns_cdf + from nns.plotting.regression import plot_nns_part as plot_nns_part + from nns.plotting.regression import plot_nns_reg as plot_nns_reg + from nns.plotting.seasonality import plot_nns_seas as plot_nns_seas + +_EXPORTS = { + "plot_nns_anova": ("nns.plotting.anova", "plot_nns_anova"), + "plot_nns_arma": ("nns.plotting.arma", "plot_nns_arma"), + "plot_nns_arma_optim": ("nns.plotting.arma", "plot_nns_arma_optim"), + "plot_nns_causation": ("nns.plotting.causation", "plot_nns_causation"), + "plot_nns_copula": ("nns.plotting.copula", "plot_nns_copula"), + "plot_nns_diff": ("nns.plotting.differentiation", "plot_nns_diff"), + "plot_fsd": ("nns.plotting.dominance", "plot_fsd"), + "plot_ssd": ("nns.plotting.dominance", "plot_ssd"), + "plot_tsd": ("nns.plotting.dominance", "plot_tsd"), + "plot_nns_norm": ("nns.plotting.normalization", "plot_nns_norm"), + "plot_nns_cdf": ("nns.plotting.partial_moments", "plot_nns_cdf"), + "plot_nns_part": ("nns.plotting.regression", "plot_nns_part"), + "plot_nns_reg": ("nns.plotting.regression", "plot_nns_reg"), + "plot_nns_seas": ("nns.plotting.seasonality", "plot_nns_seas"), +} + +__all__ = sorted((*_EXPORTS, "palette")) + + +def __getattr__(name: str) -> Any: + if name not in _EXPORTS: + raise AttributeError(f"module 'nns.plotting' has no attribute {name!r}") + from importlib import import_module + + module_name, attr_name = _EXPORTS[name] + value = getattr(import_module(module_name), attr_name) + globals()[name] = value + return value diff --git a/src/nns/plotting/_mpl.py b/src/nns/plotting/_mpl.py new file mode 100644 index 00000000..78bdb339 --- /dev/null +++ b/src/nns/plotting/_mpl.py @@ -0,0 +1,57 @@ +"""Lazy matplotlib loading for the plotting API. + +matplotlib is a regular dependency of this package, but it is still imported +lazily (never at package import time) so ``import nns`` stays light. Every plot +function calls :func:`require_mpl` to import it on demand. +""" + +from __future__ import annotations + +from typing import TYPE_CHECKING, Any, cast + +if TYPE_CHECKING: # pragma: no cover - typing only + from matplotlib.axes import Axes + +_INSTALL_HINT = ( + "matplotlib is required for nns.plotting but could not be imported; " + "reinstall ovvo-nns to restore it (`pip install --force-reinstall ovvo-nns`)." +) + + +def require_mpl() -> Any: + """Import and return the ``matplotlib.pyplot`` module, or raise ImportError.""" + try: + import matplotlib.pyplot as plt + except ImportError as exc: # pragma: no cover - exercised via test monkeypatch + raise ImportError(_INSTALL_HINT) from exc + return plt + + +def horizontal_boxplot(ax: Axes, data: Any, **kwargs: Any) -> Any: + """``ax.boxplot`` rendered horizontally, compatible across matplotlib versions. + + ``vert=`` was deprecated for ``orientation=`` in matplotlib 3.11; prefer the + new keyword when present and fall back to the old one for >= 3.7. + """ + import matplotlib + + version = tuple(int(p) for p in matplotlib.__version__.split(".")[:2]) + if version >= (3, 11): + return ax.boxplot(data, orientation="horizontal", **kwargs) + return ax.boxplot(data, vert=False, **kwargs) + + +def resolve_ax(ax: Axes | None) -> Axes: + """Return ``ax`` if given, otherwise create a fresh Axes. + + Plot functions never call ``plt.show()``; they return the Axes/Figure so the + caller controls display and saving. + """ + if ax is not None: + return ax + plt = require_mpl() + _, new_ax = plt.subplots() + return cast("Axes", new_ax) + + +__all__ = ["require_mpl", "resolve_ax"] diff --git a/src/nns/plotting/anova.py b/src/nns/plotting/anova.py new file mode 100644 index 00000000..9eda0f38 --- /dev/null +++ b/src/nns/plotting/anova.py @@ -0,0 +1,46 @@ +"""Plot for ``nns_anova`` (R: ANOVA.R).""" + +from __future__ import annotations + +from collections.abc import Sequence +from typing import TYPE_CHECKING, Any + +import numpy as np + +from nns.plotting import palette +from nns.plotting._mpl import horizontal_boxplot, resolve_ax + +if TYPE_CHECKING: # pragma: no cover - typing only + from matplotlib.axes import Axes + + +def plot_nns_anova( + groups: Sequence[Any], + *, + medians: bool = False, + ax: Axes | None = None, +) -> Axes: + """Plot ANOVA group boxplots, faithful to R ``NNS.ANOVA(..., plot = TRUE)``. + + * first box: ``steelblue``; remaining boxes: ``rainbow(n - 1)`` + * grand mean/median reference line (vertical): ``red`` + """ + ax = resolve_ax(ax) + arrays = [np.asarray(g, dtype=np.float64) for g in groups] + n = len(arrays) + + bp = horizontal_boxplot(ax, arrays, patch_artist=True) + rest = palette.rainbow(n - 1) + facecolors = ["steelblue", *[tuple(c) for c in rest]] + for patch, color in zip(bp["boxes"], facecolors, strict=True): + patch.set_facecolor(color) + + centers = [float(np.median(a)) if medians else float(np.mean(a)) for a in arrays] + grand = float(np.mean(centers)) + ax.axvline(grand, color="red", linewidth=4) + ax.set_title("NNS ANOVA") + ax.set_xlabel("Grand Median" if medians else "Grand Mean") + return ax + + +__all__ = ["plot_nns_anova"] diff --git a/src/nns/plotting/arma.py b/src/nns/plotting/arma.py new file mode 100644 index 00000000..88b487ba --- /dev/null +++ b/src/nns/plotting/arma.py @@ -0,0 +1,121 @@ +"""Plots for ``nns_arma`` and ``nns_arma_optim`` (R: ARMA.R, ARMA_optim.R).""" + +from __future__ import annotations + +from collections.abc import Mapping +from typing import TYPE_CHECKING, Any + +import numpy as np + +from nns.plotting import palette +from nns.plotting._mpl import resolve_ax + +if TYPE_CHECKING: # pragma: no cover - typing only + from matplotlib.axes import Axes + + +def _estimates_and_bounds( + forecast: Any, +) -> tuple[np.ndarray, np.ndarray | None, np.ndarray | None]: + """Split an nns_arma return into (estimates, lower, upper).""" + if isinstance(forecast, Mapping): + est = np.asarray(forecast["Estimates"], dtype=np.float64) + lower = upper = None + for key, value in forecast.items(): + if key.startswith("Lower"): + lower = np.asarray(value, dtype=np.float64) + elif key.startswith("Upper"): + upper = np.asarray(value, dtype=np.float64) + return est, lower, upper + return np.asarray(forecast, dtype=np.float64), None, None + + +def plot_nns_arma( + forecast: Any, + original: Any, + *, + training_set: int | None = None, + ax: Axes | None = None, +) -> Axes: + """Plot an ``nns_arma`` forecast, faithful to R ``NNS.ARMA(..., plot = TRUE)``. + + * original series: ``steelblue`` line + * prediction-interval band: pink at alpha ``0.5`` + * forecast line + connector segment: ``red`` + * training-set markers (filled diamonds): pure green + """ + ax = resolve_ax(ax) + ov = np.asarray(original, dtype=np.float64) + n = ov.size + start = int(training_set) if training_set is not None else n + est, lower, upper = _estimates_and_bounds(forecast) + h = est.size + + # x positions are 1-based to match R's plot indices. + ov_x = np.arange(1, n + 1) + fc_x = np.arange(start + 1, start + h + 1) + + # Original series: steelblue. + ax.plot(ov_x, ov, color="steelblue", linewidth=2) + + # Prediction-interval band: pink at alpha 0.5. + if lower is not None and upper is not None: + ax.fill_between(fc_x, lower, upper, color=palette.PINK, + alpha=palette.CI_ALPHA_ARMA, linewidth=0.0) + + # Forecast line + connector segment back to the last observed point: red. + ax.plot(fc_x, est, color="red", linewidth=2) + if 1 <= start <= n: + ax.plot([start, start + 1], [ov[start - 1], est[0]], color="red", linewidth=2) + + # Training-set markers: pure-green diamonds. + if 1 <= start <= n: + ax.scatter([start], [ov[start - 1]], color=palette.GREEN, marker="D") + ax.scatter([start + h], [est[-1]], color=palette.GREEN, marker="D") + + ax.legend(["Original", f"Forecast {h} period(s)"], loc="upper left", frameon=False) + ax.set_title("NNS.ARMA Forecast") + return ax + + +def plot_nns_arma_optim( + result: Mapping[str, Any], + original: Any, + *, + ax: Axes | None = None, +) -> Axes: + """Plot an ``nns_arma_optim`` result, faithful to R ``NNS.ARMA.optim``. + + * original series: ``steelblue`` line + * confidence band: ``steelblue`` at alpha ``0.5`` + * predicted/model line (dashed): ``red`` + """ + ax = resolve_ax(ax) + ov = np.asarray(original, dtype=np.float64) + n = ov.size + results = np.asarray(result["results"], dtype=np.float64) + h = results.size + ov_x = np.arange(1, n + 1) + fc_x = np.arange(n + 1, n + h + 1) + + ax.plot(ov_x, ov, color="steelblue", linewidth=2) + + lower = result.get("lower.pred.int") + upper = result.get("upper.pred.int") + if lower is not None and upper is not None: + ax.fill_between( + fc_x, + np.asarray(lower, dtype=np.float64), + np.asarray(upper, dtype=np.float64), + color="steelblue", + alpha=palette.CI_ALPHA_ARMA, + linewidth=0.0, + ) + + ax.plot(fc_x, results, color="red", linewidth=2, linestyle="--") + ax.legend(["Variable", "Internal Validation"], loc="upper left", frameon=False) + ax.set_title("NNS.ARMA Forecast") + return ax + + +__all__ = ["plot_nns_arma", "plot_nns_arma_optim"] diff --git a/src/nns/plotting/causation.py b/src/nns/plotting/causation.py new file mode 100644 index 00000000..a2e904d3 --- /dev/null +++ b/src/nns/plotting/causation.py @@ -0,0 +1,38 @@ +"""Plot for ``nns_causation`` (R: Uni_Causation.R).""" + +from __future__ import annotations + +from typing import TYPE_CHECKING, Any + +import numpy as np + +from nns.plotting._mpl import resolve_ax + +if TYPE_CHECKING: # pragma: no cover - typing only + from matplotlib.axes import Axes + + +def _standardize(v: np.ndarray) -> np.ndarray: + sd = np.std(v) + if sd == 0: + return np.asarray(v - np.mean(v), dtype=np.float64) + return np.asarray((v - np.mean(v)) / sd, dtype=np.float64) + + +def plot_nns_causation(x: Any, y: Any, *, ax: Axes | None = None) -> Axes: + """Plot the standardized X/Y series used by ``NNS.causation``. + + Faithful to R's first causation panel: the Y series is ``red`` and the X + series is ``steelblue``, with the legend ordered ``[X (steelblue), Y (red)]``. + """ + ax = resolve_ax(ax) + xs = _standardize(np.asarray(x, dtype=np.float64)) + ys = _standardize(np.asarray(y, dtype=np.float64)) + ax.plot(xs, color="steelblue", linewidth=3, label="X") + ax.plot(ys, color="red", linewidth=3, label="Y") + ax.legend(loc="upper center", ncol=2) + ax.set_ylabel("STANDARDIZED") + return ax + + +__all__ = ["plot_nns_causation"] diff --git a/src/nns/plotting/copula.py b/src/nns/plotting/copula.py new file mode 100644 index 00000000..445eab91 --- /dev/null +++ b/src/nns/plotting/copula.py @@ -0,0 +1,57 @@ +"""Plot for ``nns_copula`` (R: Copula.R).""" + +from __future__ import annotations + +from typing import TYPE_CHECKING, Any + +import numpy as np + +from nns.plotting._mpl import require_mpl, resolve_ax + +if TYPE_CHECKING: # pragma: no cover - typing only + from matplotlib.axes import Axes + + +def _orthant_colors(data: np.ndarray) -> list[str]: + """Color each row by orthant (Copula.R:46-48). + + * all dimensions <= their column mean -> ``red`` (lower orthant) + * all dimensions > their column mean -> ``green`` (upper orthant) + * otherwise -> ``steelblue`` + """ + means = data.mean(axis=0) + below = (data <= means).all(axis=1) + above = (data > means).all(axis=1) + colors = np.full(data.shape[0], "steelblue", dtype=object) + colors[below] = "red" + colors[above] = "#00FF00" # R pure green (mpl "green" would be #008000) + return colors.tolist() + + +def plot_nns_copula(x: Any, *, ax: Axes | None = None) -> Axes: + """Scatter the copula input matrix with R's orthant coloring (Copula.R). + + Supports 2-D (scatter) and 3-D (``n == 3``) inputs. Lower-orthant points + (all dimensions below their mean) are ``red``, upper-orthant points are pure + green, and the rest are ``steelblue``. + """ + data = np.asarray(x, dtype=np.float64) + if data.ndim != 2 or data.shape[1] < 2: + raise ValueError("plot_nns_copula expects a 2-D array with >= 2 columns.") + colors = _orthant_colors(data) + n = data.shape[1] + + if n == 3: + if ax is None: + plt = require_mpl() + fig = plt.figure() + ax = fig.add_subplot(projection="3d") + ax.scatter(data[:, 0], data[:, 1], data[:, 2], color=colors) + return ax + + ax = resolve_ax(ax) + ax.scatter(data[:, 0], data[:, 1], color=colors) + return ax + + +__all__ = ["plot_nns_copula"] diff --git a/src/nns/plotting/differentiation.py b/src/nns/plotting/differentiation.py new file mode 100644 index 00000000..51552d4e --- /dev/null +++ b/src/nns/plotting/differentiation.py @@ -0,0 +1,79 @@ +"""Plot for ``nns_diff`` numerical differentiation (R: Numerical_Differentiation.R).""" + +from __future__ import annotations + +from collections.abc import Callable +from typing import TYPE_CHECKING, Any + +import numpy as np + +from nns.plotting import palette +from nns.plotting._mpl import resolve_ax + +if TYPE_CHECKING: # pragma: no cover - typing only + from matplotlib.axes import Axes + + +def plot_nns_diff( + f: Callable[[Any], Any], + point: float, + *, + h: float | None = None, + ax: Axes | None = None, +) -> Axes: + """Plot ``NNS.diff``'s ``f(x)`` / y-intercept-range panel (Numerical_Differentiation.R). + + Reconstructs the initial finite-step geometry (R uses ``h``, not the inferred + step, in this panel): + + * function curve: ``azure4`` + * zero reference lines: ``grey`` (R ``grey`` == ``#BEBEBE``, not mpl gray) + * center point ``f(point)``: pure green + * the two finite-step bound points/segments swap ``steelblue`` <-> ``red`` + according to which secant y-intercept (``B1`` vs ``B2``) is higher. + """ + ax = resolve_ax(ax) + point = float(point) + h = abs(point) * 0.1 + 0.01 if h is None else float(h) + + f_x = float(f(point)) + f_lower = float(f(point - h)) # f.x.h.lower + f_upper = float(f(point + h)) # f.x.h.upper + + left_slope = (f_x - f_lower) / h + right_slope = (f_upper - f_x) / h + b1 = f_x - left_slope * point + b2 = f_x - right_slope * point + high_b = max(b1, b2) + lower_color = "steelblue" if b1 == high_b else "red" + upper_color = "red" if b1 == high_b else "steelblue" + + # Function curve: azure4 (no matplotlib name -> pinned hex). + lo = min(point - 100 * h, point + 100 * h, 0.0) + hi = max(point - 100 * h, point + 100 * h, 0.0) + xs = np.linspace(lo, hi, 1000) + ax.plot(xs, np.asarray([f(v) for v in xs], dtype=np.float64), color=palette.AZURE4, linewidth=2) + + # Zero reference lines: R grey (#BEBEBE). + ax.axhline(0.0, color=palette.GREY) + ax.axvline(0.0, color=palette.GREY) + + # Center point: pure green. + ax.scatter([point], [f_x], color=palette.GREEN, marker="o") + + # Finite-step bound points (filled) and secant y-intercept markers (open). + ax.scatter([point - h], [f_lower], color=lower_color, marker="o") + ax.scatter([point + h], [f_upper], color=upper_color, marker="o") + ax.scatter([0.0, 0.0], [b1, b2], facecolors="none", + edgecolors=[lower_color, upper_color], marker="o") + + # Dashed secant segments from each y-intercept to its bound point. + ax.plot([0.0, point - h], [b1, f_lower], color=lower_color, linestyle="--") + ax.plot([0.0, point + h], [b2, f_upper], color=upper_color, linestyle="--") + + ax.set_ylabel("f(x)") + ax.set_title("f(x) and initial y-intercept range") + return ax + + +__all__ = ["plot_nns_diff"] diff --git a/src/nns/plotting/dominance.py b/src/nns/plotting/dominance.py new file mode 100644 index 00000000..553c644b --- /dev/null +++ b/src/nns/plotting/dominance.py @@ -0,0 +1,78 @@ +"""Plots for FSD / SSD / TSD stochastic-dominance tests (R: FSD.R, SSD.R, TSD.R). + +In every case the X curve is ``red`` and the Y curve is ``steelblue`` with the +legend ordered ``[X (red), Y (steelblue)]`` -- matching the R ``col=`` usage. +""" + +from __future__ import annotations + +from collections.abc import Callable +from typing import TYPE_CHECKING, Any + +import numpy as np + +from nns.core import lpm, lpm_ratio +from nns.plotting._mpl import resolve_ax + +if TYPE_CHECKING: # pragma: no cover - typing only + from matplotlib.axes import Axes + + +def _dominance_plot( + x: Any, + y: Any, + *, + title: str, + ylabel: str, + curve: Callable[[np.ndarray, np.ndarray], np.ndarray], + ax: Axes | None, +) -> Axes: + ax = resolve_ax(ax) + x = np.asarray(x, dtype=np.float64) + y = np.asarray(y, dtype=np.float64) + combined = np.sort(np.concatenate([x, y])) + lpm_x = curve(combined, x) + lpm_y = curve(combined, y) + ax.plot(combined, lpm_x, color="red", linewidth=3) + ax.plot(combined, lpm_y, color="steelblue", linewidth=3) + ax.legend(["X", "Y"], loc="upper left") + ax.set_title(title) + ax.set_ylabel(ylabel) + return ax + + +def plot_fsd(x: Any, y: Any, *, type: str = "discrete", ax: Axes | None = None) -> Axes: + """Plot the FSD test: cumulative distributions (X red, Y steelblue).""" + degree = 0.0 if str(type).lower() == "discrete" else 1.0 + return _dominance_plot( + x, y, + title="FSD", + ylabel="Probability of Cumulative Distribution", + curve=lambda t, v: np.asarray(lpm_ratio(degree, t, v), dtype=np.float64), + ax=ax, + ) + + +def plot_ssd(x: Any, y: Any, *, ax: Axes | None = None) -> Axes: + """Plot the SSD test: area of cumulative distributions (X red, Y steelblue).""" + return _dominance_plot( + x, y, + title="SSD", + ylabel="Area of Cumulative Distribution", + curve=lambda t, v: np.asarray(lpm(1.0, t, v), dtype=np.float64), + ax=ax, + ) + + +def plot_tsd(x: Any, y: Any, *, ax: Axes | None = None) -> Axes: + """Plot the TSD test: area of cumulative distributions (X red, Y steelblue).""" + return _dominance_plot( + x, y, + title="TSD", + ylabel="Area of Cumulative Distribution", + curve=lambda t, v: np.asarray(lpm(2.0, t, v), dtype=np.float64), + ax=ax, + ) + + +__all__ = ["plot_fsd", "plot_ssd", "plot_tsd"] diff --git a/src/nns/plotting/normalization.py b/src/nns/plotting/normalization.py new file mode 100644 index 00000000..3d369f1f --- /dev/null +++ b/src/nns/plotting/normalization.py @@ -0,0 +1,57 @@ +"""Plot for ``nns_norm`` (R: Normalization.R).""" + +from __future__ import annotations + +from typing import TYPE_CHECKING, Any, Literal + +import numpy as np + +from nns.plotting import palette +from nns.plotting._mpl import resolve_ax + +if TYPE_CHECKING: # pragma: no cover - typing only + from matplotlib.axes import Axes + + +def _series_colors(n: int) -> list[Any]: + """First series ``steelblue``; remaining series follow ``rainbow(n)``.""" + rainbow = [tuple(c) for c in palette.rainbow(n)] + return ["steelblue", *rainbow][:n] + + +def plot_nns_norm( + x: Any, + *, + chart_type: Literal["l", "b"] = "l", + ax: Axes | None = None, +) -> Axes: + """Plot the input series for ``NNS.norm``, faithful to Normalization.R. + + * line chart (``chart_type="l"``): first series ``steelblue``, rest ``rainbow`` + * boxplot chart (``chart_type="b"``): raw boxes ``grey``, normalized ``rainbow`` + """ + ax = resolve_ax(ax) + data = np.asarray(x, dtype=np.float64) + if data.ndim == 1: + data = data.reshape(-1, 1) + n = data.shape[1] + + if chart_type == "b": + from nns.norm import nns_norm + + normalized = np.asarray(nns_norm(data), dtype=np.float64) + columns = [data[:, j] for j in range(n)] + [normalized[:, j] for j in range(n)] + bp = ax.boxplot(columns, patch_artist=True) + rainbow = [tuple(c) for c in palette.rainbow(n)] + facecolors = [palette.GREY] * n + rainbow + for patch, color in zip(bp["boxes"], facecolors, strict=True): + patch.set_facecolor(color) + return ax + + colors = _series_colors(n) + for j in range(n): + ax.plot(data[:, j], color=colors[j], linewidth=2) + return ax + + +__all__ = ["plot_nns_norm"] diff --git a/src/nns/plotting/palette.py b/src/nns/plotting/palette.py new file mode 100644 index 00000000..18cdd7d6 --- /dev/null +++ b/src/nns/plotting/palette.py @@ -0,0 +1,59 @@ +"""R ``grDevices`` colors, pinned to exact hex for plot parity with R NNS. + +R and matplotlib agree on ``steelblue`` and ``red`` but **disagree** on +``green`` and ``grey``/``gray``. To stay faithful to the ``col=`` usage in +``tools/NNS/R/*.R`` we pin every non-trivial color to its exact R hex value. + +Fidelity traps (do **not** trust matplotlib's same-named color): + +* R ``green`` is pure green ``#00FF00`` (matplotlib ``green`` is ``#008000``). +* R ``grey``/``gray`` is ``#BEBEBE`` (matplotlib ``gray`` is ``#808080``). + +The literal names ``"steelblue"`` and ``"red"`` are identical in both stacks +and may be used as-is; everything else should reference the constants here. +""" + +from __future__ import annotations + +import colorsys + +# -- Colors that are identical in R and matplotlib (safe to use by name) ---- +STEELBLUE = "#4682B4" # R "steelblue" == mpl "steelblue" +RED = "#FF0000" # R "red" == mpl "red" +BLUE = "#0000FF" # R "blue" == mpl "blue" +PINK = "#FFC0CB" # R rgb(1, 192/255, 203/255) CI band == mpl "pink" + +# -- Colors where the same name means something DIFFERENT in matplotlib ----- +GREEN = "#00FF00" # R "green" is PURE green; mpl "green" is #008000 -> use this +GREY = "#BEBEBE" # R "grey"/"gray"; mpl "gray" is #808080 -> DIFFERENT +AZURE4 = "#838B8B" # R "azure4" (no matplotlib name) + +# -- Confidence/prediction-interval fill alphas R uses ---------------------- +CI_ALPHA_REG = 0.375 # NNS.reg pink band: rgb(1, 192/255, 203/255, alpha = 0.375) +CI_ALPHA_ARMA = 0.5 # NNS.ARMA pink band & NNS.ARMA.optim steelblue band: alpha = 0.5 + + +def rainbow(n: int) -> list[tuple[float, float, float]]: + """Emulate R's ``grDevices::rainbow(n)`` (HSV with ``s = v = 1``). + + R sweeps hues ``0, 1/n, ..., (n-1)/n`` at full saturation and value. This + is *not* identical to ``plt.cm.rainbow``; use this for color parity on the + multi-series plots (``NNS.norm``, ``NNS.ANOVA``). + """ + if n <= 0: + return [] + return [colorsys.hsv_to_rgb(i / n, 1.0, 1.0) for i in range(n)] + + +__all__ = [ + "AZURE4", + "BLUE", + "CI_ALPHA_ARMA", + "CI_ALPHA_REG", + "GREEN", + "GREY", + "PINK", + "RED", + "STEELBLUE", + "rainbow", +] diff --git a/src/nns/plotting/partial_moments.py b/src/nns/plotting/partial_moments.py new file mode 100644 index 00000000..7409104b --- /dev/null +++ b/src/nns/plotting/partial_moments.py @@ -0,0 +1,52 @@ +"""Plot for ``nns_cdf`` / VaR overlays (R: Partial_Moments.R).""" + +from __future__ import annotations + +from collections.abc import Mapping +from typing import TYPE_CHECKING, Any + +import numpy as np + +from nns.plotting import palette +from nns.plotting._mpl import resolve_ax + +if TYPE_CHECKING: # pragma: no cover - typing only + from matplotlib.axes import Axes + + +def plot_nns_cdf( + result: Mapping[str, Any], + *, + target: float | None = None, + ax: Axes | None = None, +) -> Axes: + """Plot an ``nns_cdf`` result, faithful to R ``NNS.CDF(..., plot = TRUE)``. + + * step CDF line + points: ``steelblue`` + * VaR/target segments (dashed): ``red`` + * VaR point (at the target): pure green + """ + ax = resolve_ax(ax) + function = result["Function"] + x = np.asarray(function["x"], dtype=np.float64) + colname = next(k for k in function if k != "x") + fx = np.asarray(function[colname], dtype=np.float64) + + # Step CDF + points: steelblue. + ax.step(x, fx, where="post", color="steelblue", linewidth=2) + ax.scatter(x, fx, color="steelblue", marker="o") + + target_value = np.asarray(result.get("target.value", []), dtype=np.float64).reshape(-1) + if target is not None and target_value.size: + pv = float(target_value[0]) + # Dashed red VaR segments down from the curve and across to the y-axis. + ax.plot([target, target], [0.0, pv], color="red", linestyle="--", linewidth=2) + ax.plot([float(x.min()), target], [pv, pv], color="red", linestyle="--", linewidth=2) + # Pure-green target point. + ax.scatter([target], [pv], color=palette.GREEN, marker="o") + + ax.set_ylabel(colname) + return ax + + +__all__ = ["plot_nns_cdf"] diff --git a/src/nns/plotting/regression.py b/src/nns/plotting/regression.py new file mode 100644 index 00000000..b2ed8ff6 --- /dev/null +++ b/src/nns/plotting/regression.py @@ -0,0 +1,108 @@ +"""Plots for ``nns_reg`` and ``nns_part`` (R: Regression.R, Partition_Map.R).""" + +from __future__ import annotations + +from collections.abc import Mapping +from typing import TYPE_CHECKING, Any + +import numpy as np + +from nns.plotting import palette +from nns.plotting._mpl import resolve_ax + +if TYPE_CHECKING: # pragma: no cover - typing only + from matplotlib.axes import Axes + + +def _sorted_xy(x: Any, y: Any) -> tuple[np.ndarray, np.ndarray]: + x = np.asarray(x, dtype=np.float64) + y = np.asarray(y, dtype=np.float64) + order = np.argsort(x) + return x[order], y[order] + + +def plot_nns_reg( + result: Mapping[str, Any], + *, + ax: Axes | None = None, + ci: bool = True, + point_est: Any = None, +) -> Axes: + """Plot an ``nns_reg`` result, faithful to R ``NNS.reg(..., plot = TRUE)``. + + Element colors (Regression.R): + + * data scatter (open circles): ``steelblue`` + * confidence-interval band fill: pink at alpha ``0.375`` + * regression points (filled squares) + connecting line: ``red`` + * point estimates (filled diamonds) + extrapolation segments: pure green + """ + ax = resolve_ax(ax) + fitted = result["Fitted.xy"] + x = np.asarray(fitted["x"], dtype=np.float64) + y = np.asarray(fitted["y"], dtype=np.float64) + + # 1. Data scatter: open circles, steelblue. + ax.scatter(x, y, facecolors="none", edgecolors="steelblue", marker="o") + + # 2. Confidence-interval band: pink polygon at alpha 0.375 (if available). + if ci and "conf.int.pos" in fitted and "conf.int.neg" in fitted: + idx = np.argsort(x) + pos = np.asarray(fitted["conf.int.pos"], dtype=np.float64)[idx] + neg = np.asarray(fitted["conf.int.neg"], dtype=np.float64)[idx] + mask = np.isfinite(pos) & np.isfinite(neg) + if mask.any(): + ax.fill_between( + x[idx][mask], + neg[mask], + pos[mask], + color=palette.PINK, + alpha=palette.CI_ALPHA_REG, + linewidth=0.0, + ) + + # 3. Regression points: red filled squares + red dashed connecting line. + rp = result["regression.points"] + rpx, rpy = _sorted_xy(rp["x"], rp["y"]) + finite = np.isfinite(rpx) & np.isfinite(rpy) + ax.plot(rpx[finite], rpy[finite], color="red", linewidth=2, linestyle="--") + ax.scatter(rpx[finite], rpy[finite], color="red", marker="s") + + # 4. Point estimates: pure-green filled diamonds (+ extrapolation segments). + pe_y = np.asarray(result.get("Point.est", []), dtype=np.float64) + if point_est is not None and pe_y.size: + pe_x = np.asarray(point_est, dtype=np.float64).reshape(-1) + ax.scatter(pe_x, pe_y, color=palette.GREEN, marker="D", s=80) + if pe_x.size and rpx[finite].size: + hi = pe_x > x.max() + for px, py in zip(pe_x[hi], pe_y[hi], strict=True): + ax.plot([px, rpx[finite][-1]], [py, rpy[finite][-1]], + color=palette.GREEN, linestyle="--") + lo = pe_x < x.min() + for px, py in zip(pe_x[lo], pe_y[lo], strict=True): + ax.plot([px, rpx[finite][0]], [py, rpy[finite][0]], + color=palette.GREEN, linestyle="--") + + ax.set_title(f"NNS Order = {max(1, int(result.get('order', 1) or 1))}") + return ax + + +def plot_nns_part(result: Mapping[str, Any], *, ax: Axes | None = None) -> Axes: + """Plot an ``nns_part`` result, faithful to R ``NNS.part(..., plot = TRUE)``. + + Scatter is ``steelblue``; regression points (filled squares) are ``red``. + """ + ax = resolve_ax(ax) + dt = result["dt"] + x = np.asarray(dt["x"], dtype=np.float64) + y = np.asarray(dt["y"], dtype=np.float64) + ax.scatter(x, y, color="steelblue") + + rp = result["regression.points"] + rpx = np.asarray(rp["x"], dtype=np.float64) + rpy = np.asarray(rp["y"], dtype=np.float64) + ax.scatter(rpx, rpy, color="red", marker="s", linewidths=2) + return ax + + +__all__ = ["plot_nns_part", "plot_nns_reg"] diff --git a/src/nns/plotting/seasonality.py b/src/nns/plotting/seasonality.py new file mode 100644 index 00000000..2798c173 --- /dev/null +++ b/src/nns/plotting/seasonality.py @@ -0,0 +1,43 @@ +"""Plot for ``nns_seas`` (R: Seasonality_Test.R).""" + +from __future__ import annotations + +from collections.abc import Mapping +from typing import TYPE_CHECKING, Any + +import numpy as np + +from nns.plotting._mpl import resolve_ax + +if TYPE_CHECKING: # pragma: no cover - typing only + from matplotlib.axes import Axes + + +def plot_nns_seas(result: Mapping[str, Any], *, ax: Axes | None = None) -> Axes: + """Plot an ``nns_seas`` result, faithful to R ``NNS.seas(..., plot = TRUE)``. + + * component-series CV points: ``steelblue`` + * best period (enlarged point) + overall-CV reference line (dashed) + label: ``red`` + """ + ax = resolve_ax(ax) + periods = result["all.periods"] + period = np.asarray(periods["Period"], dtype=np.float64) + cv = np.asarray(periods["Coefficient.of.Variation"], dtype=np.float64) + + # All component-series CV points: steelblue. + ax.scatter(period, cv, color="steelblue", marker="o") + + # Best period is the first (table keyed ascending by CV): enlarged red point. + if period.size: + ax.scatter([period[0]], [cv[0]], color="red", marker="o", s=80) + + overall_cv = float(np.asarray(periods["Variable.Coefficient.of.Variation"])[0]) + if np.isfinite(overall_cv): + ax.axhline(overall_cv, color="red", linestyle="--") + + ax.set_xlabel("Period") + ax.set_ylabel("Component Series CV") + return ax + + +__all__ = ["plot_nns_seas"] diff --git a/tests/plotting/__init__.py b/tests/plotting/__init__.py new file mode 100644 index 00000000..e69de29b diff --git a/tests/plotting/conftest.py b/tests/plotting/conftest.py new file mode 100644 index 00000000..4a84b82b --- /dev/null +++ b/tests/plotting/conftest.py @@ -0,0 +1,7 @@ +"""Force the non-interactive Agg backend for all plotting tests (no display).""" + +from __future__ import annotations + +import matplotlib + +matplotlib.use("Agg") diff --git a/tests/plotting/test_lazy_import.py b/tests/plotting/test_lazy_import.py new file mode 100644 index 00000000..98d25c0c --- /dev/null +++ b/tests/plotting/test_lazy_import.py @@ -0,0 +1,37 @@ +"""matplotlib is a regular dependency but still imported lazily, never eagerly.""" + +from __future__ import annotations + +import builtins + +import pytest + +import nns.plotting._mpl as mpl_helper + + +def test_require_mpl_returns_pyplot() -> None: + plt = mpl_helper.require_mpl() + assert hasattr(plt, "subplots") + + +def test_require_mpl_raises_clear_error(monkeypatch: pytest.MonkeyPatch) -> None: + real_import = builtins.__import__ + + def fake_import(name: str, *args: object, **kwargs: object) -> object: + if name.startswith("matplotlib"): + raise ImportError("No module named 'matplotlib'") + return real_import(name, *args, **kwargs) # type: ignore[arg-type] + + monkeypatch.setattr(builtins, "__import__", fake_import) + with pytest.raises(ImportError, match=r"matplotlib is required for nns\.plotting"): + mpl_helper.require_mpl() + + +def test_importing_nns_core_does_not_import_matplotlib() -> None: + # The core package must not pull matplotlib in at import time. + import importlib + + src = importlib.import_module("nns").__file__ or "" + with open(src, encoding="utf-8") as handle: + text = handle.read() + assert "matplotlib" not in text diff --git a/tests/plotting/test_palette.py b/tests/plotting/test_palette.py new file mode 100644 index 00000000..78aa0963 --- /dev/null +++ b/tests/plotting/test_palette.py @@ -0,0 +1,52 @@ +"""The palette pins exact R grDevices hex -- especially the fidelity traps.""" + +from __future__ import annotations + +import matplotlib.colors as mcolors + +from nns.plotting import palette + + +def test_safe_names_match_matplotlib() -> None: + # steelblue and red are identical in R and matplotlib. + assert mcolors.to_hex(palette.STEELBLUE) == "#4682b4" + assert mcolors.to_hex("steelblue") == "#4682b4" + assert mcolors.to_hex(palette.RED) == "#ff0000" + assert mcolors.to_hex("red") == "#ff0000" + + +def test_green_trap() -> None: + # R "green" is PURE green; matplotlib "green" is #008000 -- they DIFFER. + assert palette.GREEN == "#00FF00" + assert mcolors.to_hex("green") == "#008000" + assert mcolors.to_hex(palette.GREEN) != mcolors.to_hex("green") + + +def test_grey_trap() -> None: + # R "grey"/"gray" is #BEBEBE; matplotlib "gray" is #808080 -- they DIFFER. + assert palette.GREY == "#BEBEBE" + assert mcolors.to_hex("gray") == "#808080" + assert mcolors.to_hex(palette.GREY) != mcolors.to_hex("gray") + + +def test_azure4_pinned() -> None: + assert mcolors.to_hex(palette.AZURE4) == "#838b8b" + + +def test_pink_band_matches_r_rgb() -> None: + # R uses rgb(1, 192/255, 203/255) for the CI band == matplotlib "pink". + assert mcolors.to_hex(palette.PINK) == "#ffc0cb" + + +def test_ci_alphas() -> None: + assert palette.CI_ALPHA_REG == 0.375 + assert palette.CI_ALPHA_ARMA == 0.5 + + +def test_rainbow_matches_r_hsv() -> None: + # R rainbow(n): HSV with s=v=1 and hues 0, 1/n, ... -> for n=3, RGB primaries. + rgb = palette.rainbow(3) + assert rgb[0] == (1.0, 0.0, 0.0) + assert rgb[1] == (0.0, 1.0, 0.0) + assert rgb[2] == (0.0, 0.0, 1.0) + assert palette.rainbow(0) == [] diff --git a/tests/plotting/test_plots.py b/tests/plotting/test_plots.py new file mode 100644 index 00000000..0b9bfef8 --- /dev/null +++ b/tests/plotting/test_plots.py @@ -0,0 +1,230 @@ +"""Color/element fidelity tests for nns.plotting. + +These assert the *colors* and *which element they sit on* -- matching the R +``col=`` usage -- rather than doing any pixel/PDF comparison (see +``docs/plot_parity_policy.md``). +""" + +from __future__ import annotations + +from collections.abc import Callable, Iterator +from typing import Any + +import matplotlib + +matplotlib.use("Agg") + +import matplotlib.colors as mcolors +import matplotlib.pyplot as plt +import numpy as np +import pytest +from numpy.typing import NDArray + +import nns +from nns.plotting import ( + plot_fsd, + plot_nns_anova, + plot_nns_arma, + plot_nns_arma_optim, + plot_nns_causation, + plot_nns_cdf, + plot_nns_copula, + plot_nns_diff, + plot_nns_norm, + plot_nns_part, + plot_nns_reg, + plot_nns_seas, + plot_ssd, + plot_tsd, +) + +STEELBLUE = "#4682b4" +RED = "#ff0000" +GREEN = "#00ff00" +PINK = "#ffc0cb" +GREY = "#bebebe" +AZURE4 = "#838b8b" + + +def _hex(color: Any) -> str: + return mcolors.to_hex(color) + + +def line_hexes(ax: object) -> set[str]: + return {_hex(line.get_color()) for line in ax.get_lines()} # type: ignore[attr-defined] + + +def collection_face_hexes(ax: object) -> set[str]: + out: set[str] = set() + for coll in ax.collections: # type: ignore[attr-defined] + for row in coll.get_facecolor(): + if len(row): + out.add(_hex(row)) + return out + + +def collection_edge_hexes(ax: object) -> set[str]: + out: set[str] = set() + for coll in ax.collections: # type: ignore[attr-defined] + for row in coll.get_edgecolor(): + if len(row): + out.add(_hex(row)) + return out + + +def patch_face_hexes(ax: object) -> set[str]: + return {_hex(p.get_facecolor()) for p in ax.patches} # type: ignore[attr-defined] + + +Array = NDArray[np.float64] + + +@pytest.fixture(autouse=True) +def _close_figs() -> Iterator[None]: + yield + plt.close("all") + + +@pytest.fixture +def reg_xy() -> tuple[Array, Array]: + rng = np.random.default_rng(0) + x = np.sort(rng.normal(size=50)) + y = 2.0 * x + rng.normal(scale=0.3, size=50) + return x, y + + +def test_plot_nns_reg_colors(reg_xy: tuple[Array, Array]) -> None: + x, y = reg_xy + point_est = np.array([3.0, -3.0]) + result = nns.nns_reg(x, y, confidence_interval=0.95, point_est=point_est) + ax = plot_nns_reg(result, point_est=point_est) + + # steelblue open-circle scatter (edge colored, face transparent) + assert STEELBLUE in collection_edge_hexes(ax) + # pink CI band + assert PINK in collection_face_hexes(ax) + # red regression-point line + red squares + assert RED in line_hexes(ax) + assert RED in collection_face_hexes(ax) + # pure-green point-estimate diamonds + extrapolation segments + assert GREEN in collection_face_hexes(ax) + assert GREEN in line_hexes(ax) + + +def test_plot_nns_part_colors(reg_xy: tuple[Array, Array]) -> None: + x, y = reg_xy + result = nns.nns_part(x, y) + ax = plot_nns_part(result) + faces = collection_face_hexes(ax) + assert STEELBLUE in faces + assert RED in faces + + +@pytest.fixture +def series() -> Array: + rng = np.random.default_rng(1) + return np.cumsum(rng.normal(size=60)) + 20.0 + + +def test_plot_nns_arma_colors(series: Array) -> None: + forecast = nns.nns_arma(series, h=6, pred_int=0.95, seasonal_factor=False) + ax = plot_nns_arma(forecast, series) + lines = line_hexes(ax) + assert STEELBLUE in lines # original series + assert RED in lines # forecast + connector + faces = collection_face_hexes(ax) + assert PINK in faces # prediction band + assert GREEN in faces # training-set markers + + +def test_plot_nns_arma_optim_colors(series: Array) -> None: + result = nns.nns_arma_optim( + series[:40], h=6, seasonal_factor=[1], pred_int=0.95, print_trace=False + ) + ax = plot_nns_arma_optim(result, series[:40]) + lines = line_hexes(ax) + assert STEELBLUE in lines + assert RED in lines + # steelblue confidence band fill + assert STEELBLUE in collection_face_hexes(ax) + + +def test_plot_nns_cdf_colors(series: Array) -> None: + result = nns.nns_cdf(series, target=20.0) + ax = plot_nns_cdf(result, target=20.0) + assert STEELBLUE in line_hexes(ax) # step CDF + assert STEELBLUE in collection_face_hexes(ax) # points + assert RED in line_hexes(ax) # VaR segments + assert GREEN in collection_face_hexes(ax) # VaR point + + +@pytest.mark.parametrize("fn", [plot_fsd, plot_ssd, plot_tsd]) +def test_plot_dominance_colors(fn: Callable[..., Any]) -> None: + rng = np.random.default_rng(3) + x = rng.normal(size=80) + y = rng.normal(loc=0.5, size=80) + ax = fn(x, y) + lines = line_hexes(ax) + assert RED in lines # X curve + assert STEELBLUE in lines # Y curve + + +def test_plot_nns_anova_colors() -> None: + rng = np.random.default_rng(4) + groups = [rng.normal(size=30), rng.normal(loc=1, size=30), rng.normal(loc=2, size=30)] + ax = plot_nns_anova(groups) + # first box steelblue, grand-mean line red + assert STEELBLUE in patch_face_hexes(ax) + assert RED in line_hexes(ax) + + +def test_plot_nns_causation_colors() -> None: + rng = np.random.default_rng(5) + x = rng.normal(size=60) + y = np.roll(x, 1) + rng.normal(scale=0.1, size=60) + ax = plot_nns_causation(x, y) + lines = line_hexes(ax) + assert STEELBLUE in lines # X series + assert RED in lines # Y series + + +def test_plot_nns_norm_line_colors() -> None: + rng = np.random.default_rng(6) + x = np.column_stack([rng.normal(size=40), rng.normal(loc=5, size=40)]) + ax = plot_nns_norm(x, chart_type="l") + # first series steelblue + assert STEELBLUE in line_hexes(ax) + + +def test_plot_nns_norm_boxplot_colors() -> None: + rng = np.random.default_rng(7) + x = np.column_stack([rng.normal(size=40), rng.normal(loc=5, size=40)]) + ax = plot_nns_norm(x, chart_type="b") + # raw boxes are grey + assert GREY in patch_face_hexes(ax) + + +def test_plot_nns_seas_colors(series: Array) -> None: + result = nns.nns_seas(series, plot=False) + ax = plot_nns_seas(result) + assert STEELBLUE in collection_face_hexes(ax) # component points + assert RED in collection_face_hexes(ax) # best-period point + assert RED in line_hexes(ax) # overall-CV reference line + + +def test_plot_nns_diff_colors() -> None: + ax = plot_nns_diff(lambda z: z**2, 5.0) + assert AZURE4 in line_hexes(ax) # function curve + assert GREY in line_hexes(ax) # zero reference lines + assert GREEN in collection_face_hexes(ax) # center point + bounds = collection_face_hexes(ax) | collection_edge_hexes(ax) + assert STEELBLUE in bounds and RED in bounds # swapped bound points + + +def test_plot_nns_copula_colors() -> None: + rng = np.random.default_rng(8) + data = rng.normal(size=(120, 2)) + ax = plot_nns_copula(data) + faces = collection_face_hexes(ax) + assert RED in faces # lower-orthant points + assert STEELBLUE in faces # mixed-orthant points diff --git a/uv.lock b/uv.lock index 9424fa43..b8da99c9 100644 --- a/uv.lock +++ b/uv.lock @@ -60,6 +60,88 @@ wheels = [ { url = "https://files.pythonhosted.org/packages/d1/d6/3965ed04c63042e047cb6a3e6ed1a63a35087b6a609aa3a15ed8ac56c221/colorama-0.4.6-py2.py3-none-any.whl", hash = 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