Hi,
I was trying out BIGSI through docker and encountered this error:
docker run -v $PWD/example-data:/data phelimb/bigsi bigsi bloom --config /data/configs/berkeleydb.yaml /data/kmers.txt /data/fromTxt.bloom
ValueError: File format mismatch
Using the image from the tutorial (phelimb/bigsi:63768c2), the filter generation seems to work fine.
Edit: While the old version doesn't output anything to stdout/err, it also doesn't produce the filter (even with kmers.ctx, which the latest can make into a filter). Using kmers.ctx with the old version, BIGSI exits with 132.
Hi,
I was trying out BIGSI through docker and encountered this error:
Using the image from the tutorial (phelimb/bigsi:63768c2), the filter generation seems to work fine.
Edit: While the old version doesn't output anything to stdout/err, it also doesn't produce the filter (even with kmers.ctx, which the latest can make into a filter). Using kmers.ctx with the old version, BIGSI exits with 132.