docker-compose.base.yml

version: '3.5'

services:
  qgraph:
    build: .
    ports:
      - "7080:7080"
    environment:
      PORT: ${PORT:-7080}
      # https://docs.docker.com/compose/environment-variables/#substitute-environment-variables-in-compose-files
      # default external service urls with option to override with .env file
      ROBOKACHE: ${ROBOKACHE:-http://robokache:8080}
      STRIDER: ${STRIDER:-https://strider.renci.org/1.3}
      ARAGORN: ${ARAGORN:-https://aragorn.renci.org/aragorn}
      ROBOKOP: ${ROBOKOP:-https://aragorn.renci.org/robokop}
      NODE_NORMALIZER: ${NODE_NORMALIZER:-https://nodenormalization-sri.renci.org}
      NAME_RESOLVER: ${NAME_RESOLVER:-https://name-resolution-sri.renci.org}
      BIOLINK: ${BIOLINK:-https://raw.githubusercontent.com/biolink/biolink-model/v3.2.0/biolink-model.yaml}
  robokache:
    ports:
      - "8080:8080"
    image: ghcr.io/ncats-gamma/robokache:v4.1.5
    volumes:
      - ./robokache-data:/app/data