pyclone-vi/pyproject.toml at master · Roth-Lab/pyclone-vi · GitHub

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[build-system]
requires = ["setuptools >= 77.0.3"]
build-backend = "setuptools.build_meta"

[project]
name = "PyClone-VI"
version = "0.2.0"
description="A fast method for inferring clonal population structure."
authors = [
    {name = "Andrew Roth", email = "aroth@bccrc.ca"}
]
maintainers = [
    {name = "Emilia Hurtado", email = "ehurtado@bccrc.ca"},
    {name = "Andrew Roth", email = "aroth@bccrc.ca"}
]
readme = "README.md"
license = "GPL-3.0-or-later"
license-files = ["LICEN[CS]E.*"]
requires-python = ">=3.12"
dependencies = [
    "numba>=0.61.2",
    "numpy>=2.0",
    "scipy",
    "click>=8.3",
    "pandas>=2.2.2",
    "h5py>=3.0",
    "threadpoolctl>=3.6.0"
]
classifiers = [
    "Private :: Do Not Upload",
    "Development Status :: 4 - Beta",
    "Programming Language :: Python :: 3.12"
]

[project.urls]
Repository = "https://github.com/Roth-Lab/pyclone-vi.git"
Homepage = "https://github.com/Roth-Lab/pyclone-vi"
DOI = "https://doi.org/10.1186/s12859-020-03919-2"

[project.scripts]
pyclone-vi = "pyclone_vi.cli:main"

[tool.black]
line-length = 120

[tool.setuptools.packages.find]
exclude = ["*.tests*", "*examples*"]