The pipeline is also useful when people would like to align their non-TCR pulldown samples, but they will find the outputs after the alignment step most useful.
Note: right now to do this, the lines of the input fasta file still must include the string "TRA" or "TRB", but just adding those to the user's reference seems like a fine workaround for now.
The pipeline is also useful when people would like to align their non-TCR pulldown samples, but they will find the outputs after the alignment step most useful.
Note: right now to do this, the lines of the input fasta file still must include the string "TRA" or "TRB", but just adding those to the user's reference seems like a fine workaround for now.