SurfATT/.github/workflows/test.yml at main · TomoATT/SurfATT · GitHub

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name: Integration Tests

on:
  push:
    branches: [ devel ]
  pull_request:
    branches: [ main, devel ]

jobs:
  test:
    runs-on: ubuntu-latest
    name: ${{ matrix.testcase }}
    strategy:
      matrix:
        testcase:
          - testcase01
          - testcase02
          - testcase03
          - testcase04
          - testcase05
          - testcase06
          - testcase07
          - testcase08
          - testcase09
          - testcase10
          - testcase11
          - testcase12
          - testcase13
          - testcase14
          - testcase15
          - testcase16
          - testcase17
          - testcase18
      fail-fast: false

    steps:
      - uses: actions/checkout@v4
        with:
          submodules: recursive

      - name: Setup Mamba
        uses: conda-incubator/setup-miniconda@v3
        with:
          miniforge-version: latest
          activate-environment: build-env

      - name: Install dependencies
        shell: bash -l {0}
        run: |
          mamba install -y -c conda-forge \
            cmake make openmpi hdf5 eigen yaml-cpp \
            fortran-compiler cxx-compiler zlib spdlog
          pip install pytomoatt

      - name: Build
        shell: bash -l {0}
        run: |
          cmake -B build -DCMAKE_BUILD_TYPE=Release
          make -C build -j$(nproc)

      - name: Clone test cases
        run: git clone https://github.com/xumi1993/SurfATT-tests.git ../SurfATT-tests

      - name: Run ${{ matrix.testcase }}
        shell: bash -l {0}
        env:
          NPROC: 2
        run: |
          SURFATT_BIN=$(realpath bin)
          cd ../SurfATT-tests/${{ matrix.testcase }}
          # Fix hardcoded binary path
          sed -i "s|SRUFATT_HOME=.*|SRUFATT_HOME=${SURFATT_BIN}|" run_this_test.sh
          # Fix hardcoded NPROC variable
          sed -i "s|NPROC=.*|NPROC=${NPROC}|" run_this_test.sh
          # Fix MAXIT to 3 for faster testing
          sed -i "s|MAXIT=.*|MAXIT=3|" run_this_test.sh
          bash run_this_test.sh