Recommended options for SCOP40 test

[rcedgar]

I'd like to add SSAP to the SCOP40 benchmark reported here:

https://www.biorxiv.org/content/10.1101/2024.05.24.595840v2

What are the recommended command-line options?
Thanks!

[rcedgar]

Update -- Rough estimate, looks like this compute would need1,000 vCPU-days which is over my budget. If you guys have pre-computed SCOP40 results or would like to run this, I'm happy to include it, otherwise it looks to be too expensive.