Tha name!

[simfor]

Come up with a cool name for the program!

[D-Majlund]

Name it Melissa or APOC.

The former:
Uses M, which is the current sci-fi letter
Is a female name and as such gives emotions like "organic" and "calm"
Greek word for honey bee

The latter:
Is close to the description (Automated phylogenetics curation software)
Sounds haxxy

Both are short easy to remember names that don't sound pretentious (unlike the french group that named their software "Genious") nor like a neckbeard picked the name ("KEG" does come to mind).

[simfor]

Great suggestions! I like APOC. It sounds like some cool and/or evil artificial intelligence :)