Question about how can i generate vector representations of proteins

[xfy9]

Hi, I have a csv file that stores protein sequences，how can i generate vector representations of proteins，I would be very grateful if you could help me with my doubts

[lxie21]

Hi, You need to write a program following the steps below: 1. Generate a multiple sequence alignment for your sequence of interest. 2. Compute the conservation score for each position. 3. Extract ~200 most conserved positions. 4. Generate triplets for extracted positions. Detailed procedure is in the published DISAE paper. Best, Lei

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