question about the distilled triplets

[wawpaopao]

I am still a bit confused about this file.Take the first senqunece 'A0A016RYG7' in the 'gpcr_uniprot2triplets.json' as an example,there are 210 conserved positions.
I don't understand how to get the distilled triplets of 'A0A016RYG7' like 'pnt ntp tpl pls' at the start because it seems no relation between the sequence of 'A0A016RYG7' in the Uniprot. I mean there is no 'pnt' in the sequence.

Thank you very much!

[lxie21]

Here is the explanation from the developer: "I get the sequence from Uniprot and find that there are “P” “N” “T”. We find conserved position first then slid on the distilled sequence to get triplets."

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On Fri, Dec 17, 2021 at 11:15 AM wawpaopao ***@***.***> wrote: I am still a bit confused about this file.Take the first senqunece 'A0A016RYG7' in the 'gpcr_uniprot2triplets.json' as an example,there are 210 conserved positions. I don't understand how to get the distilled triplets of 'A0A016RYG7' like 'pnt ntp tpl pls' at the start because it seems no relation between the sequence of 'A0A016RYG7' in the Uniprot. I mean there is no 'pnt' in the sequence. Thank you very much! — Reply to this email directly, view it on GitHub <#6>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABZSBCUGE23IS3IYURDV3BDURNOZ7ANCNFSM5KJGOMTQ> . Triage notifications on the go with GitHub Mobile for iOS <https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675> or Android <https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub>. You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>