diff --git a/src/agent-sec-core/hermes-plugin/src/capabilities/base.py b/src/agent-sec-core/hermes-plugin/src/capabilities/base.py
index 0d842f629e..f1e9975661 100644
--- a/src/agent-sec-core/hermes-plugin/src/capabilities/base.py
+++ b/src/agent-sec-core/hermes-plugin/src/capabilities/base.py
@@ -6,7 +6,7 @@
 from abc import ABC, abstractmethod
 from typing import Callable, final
 
-from ..registry import safe_hook_wrapper
+from ..registry import _collect_transform_hook, safe_hook_wrapper
 
 logger = logging.getLogger("agent-sec-core")
 
@@ -45,7 +45,13 @@ def register(self, ctx, config: dict) -> None:
         self._on_register(config)
         for hook_name, callback_func in self.get_hooks_define().items():
             wrapper_func = safe_hook_wrapper(callback_func, self.id)
-            ctx.register_hook(hook_name, wrapper_func)
+            if hook_name == "transform_llm_output":
+                # Collect for single composed registration (Hermes applies
+                # transform_llm_output with "first non-empty wins", which would
+                # let one capability's warning silently drop another's).
+                _collect_transform_hook(self.id, wrapper_func)
+            else:
+                ctx.register_hook(hook_name, wrapper_func)
 
     @abstractmethod
     def _on_register(self, config: dict) -> None:
diff --git a/src/agent-sec-core/hermes-plugin/src/registry.py b/src/agent-sec-core/hermes-plugin/src/registry.py
index e8551e2ea3..ba87ac8e56 100644
--- a/src/agent-sec-core/hermes-plugin/src/registry.py
+++ b/src/agent-sec-core/hermes-plugin/src/registry.py
@@ -27,6 +27,46 @@
 # If a single hook invocation exceeds this threshold (seconds), emit a warning.
 _SLOW_HOOK_THRESHOLD = 2.0
 
+# ---------------------------------------------------------------------------
+# transform_llm_output composition
+#
+# Hermes applies transform_llm_output hooks with "first hook returning a
+# non-empty string wins" semantics (see Hermes agent/turn_finalizer.py).
+# Multiple agent-sec-core capabilities (pii-scan, prompt-scan, skill-ledger)
+# each register a transform_llm_output hook; under "first-wins", a later
+# capability's warning is silently dropped whenever an earlier capability also
+# fires in the same turn — a security warning (e.g. "status=tampered") becomes
+# invisible to the user. To avoid this, collect all capability transform
+# callbacks here and register a single composed hook that chains them, so every
+# capability's warning is prepended to the response.
+# ---------------------------------------------------------------------------
+_TRANSFORM_HOOKS: list[tuple[str, Any]] = []
+
+
+def _collect_transform_hook(capability_id: str, callback: Any) -> None:
+    """Called by AgentSecCoreCapability.register to collect (not register)
+    a capability's transform_llm_output callback for composition."""
+    _TRANSFORM_HOOKS.append((capability_id, callback))
+
+
+def _compose_transform_chain(callbacks: list[tuple[str, Any]]):
+    """Return a single transform_llm_output callback that chains ``callbacks``.
+
+    Each callback receives the accumulated text as ``response_text`` and
+    prepends its own warnings, so the composed result carries every
+    capability's warning instead of only the first one to fire.
+    """
+
+    def _chain(response_text: str = "", **kwargs: Any) -> str:
+        current = response_text
+        for _capability_id, callback in callbacks:
+            result = callback(response_text=current, **kwargs)
+            if isinstance(result, str) and result:
+                current = result
+        return current
+
+    return _chain
+
 
 def load_config(plugin_dir: Path) -> dict[str, Any]:
     """Load config.toml from the plugin directory.
@@ -70,6 +110,8 @@ def register_capabilities(
     ctx, capabilities: list[AgentSecCoreCapability], config: dict
 ) -> None:
     """Register all enabled capabilities with the Hermes plugin context."""
+    global _TRANSFORM_HOOKS
+    _TRANSFORM_HOOKS = []
     if "capabilities" not in config:
         logger.error(
             f"[agent-sec-core] config missing [capabilities] section, no capabilities registered"
@@ -103,3 +145,15 @@ def register_capabilities(
             logger.info(f"[agent-sec-core] {cap.id} registered successfully")
         except Exception as e:
             logger.error(f"[agent-sec-core] {cap.id} registration failed: {e}")
+
+    # Register a single composed transform_llm_output hook that chains every
+    # capability's transform callback, so all security warnings (prompt-scan,
+    # pii-scan, skill-ledger) are preserved instead of one silently dropping
+    # another under Hermes' "first non-empty wins" semantics.
+    if _TRANSFORM_HOOKS:
+        composed = _compose_transform_chain(_TRANSFORM_HOOKS)
+        ctx.register_hook(
+            "transform_llm_output",
+            safe_hook_wrapper(composed, "transform-compose"),
+        )
+        _TRANSFORM_HOOKS = []