Add kwargs to classes with sensible default values

[lukethehuman]

The init for GeometryMaker currently looks like this:

class GeometryMaker():
    def __init__(self) -> None:
        initialise_cubit()
        self.parameter_filler = ParameterFiller()
        self.materials_tracker = MaterialsTracker()
        self.component_tracker = ComponentTracker()
        self.design_tree = {}
        self.constructed_geometry = []
        self.print_parameter_logs = False
        self.track_components = track_components
        self.key_route_delimiter = '/'

Changing any of the settings requires an attribute override after instantiation, e.g.

maker = GeometryMaker()
maker.track_components = True

This is a little cumbersome for the end user, but also limits exposure of the options available to the user. It would be prefferable to be able to do e.g.

maker = GeometryMaker(track_components=True)

To allow for this, the init would look like this:

class GeometryMaker():
    """_summary_
    """

    def __init__(
        """_summary_

        Parameters
        ----------
        track_components : bool, optional
            _description_, by default False
        delimiter : str, optional
            _description_, by default "/"
        """        self,
        track_components: bool = False,
       delimiter: str = "/",
    ) -> None:
        initialise_cubit()
        self.parameter_filler = ParameterFiller()
        self.materials_tracker = MaterialsTracker()
        self.component_tracker = ComponentTracker()
        self.design_tree = {}
        self.constructed_geometry = []
        self.print_parameter_logs = False
        self.track_components = track_components
        self.key_route_delimiter = "/"

This should be repeated for all attributes of all classes where we expect the user (including other objects in the code which use a given object as users) may wish the change the setting.