From 3e32d213d32f75ac51ae0ff36b978fba9c6c0a85 Mon Sep 17 00:00:00 2001 From: James Logan Date: Thu, 27 Aug 2026 19:07:15 -0400 Subject: [PATCH] loosen numpy dep --- CHANGELOG.md | 6 + Cargo.lock | 2 +- Cargo.toml | 2 +- cfsem/solenoid_stress/solenoid_1d.py | 21 +++- pyproject.toml | 3 +- test/test_funcs.py | 5 +- uv.lock | 162 +-------------------------- 7 files changed, 33 insertions(+), 168 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 265496b8..d9281dc2 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 13.1.0 2026-08-27 + +* Python + * Remove dep on pydantic-numpy to loosen numpy dep range + * Loosen numpy dep requirement to >=1.23.5 + ## 13.0.0 2026-08-19 * Rust diff --git a/Cargo.lock b/Cargo.lock index 1639f717..7c5183df 100644 --- a/Cargo.lock +++ b/Cargo.lock @@ -128,7 +128,7 @@ checksum = "9330f8b2ff13f34540b44e946ef35111825727b38d33286ef986142615121801" [[package]] name = "cfsem" -version = "13.0.0" +version = "13.1.0" dependencies = [ "criterion", "faer", diff --git a/Cargo.toml b/Cargo.toml index 8fff106d..a30bcb7e 100644 --- a/Cargo.toml +++ b/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "cfsem" -version = "13.0.0" +version = "13.1.0" edition = "2024" authors = ["Commonwealth Fusion Systems "] license = "MIT" diff --git a/cfsem/solenoid_stress/solenoid_1d.py b/cfsem/solenoid_stress/solenoid_1d.py index 536cd64f..d6ea3092 100644 --- a/cfsem/solenoid_stress/solenoid_1d.py +++ b/cfsem/solenoid_stress/solenoid_1d.py @@ -30,9 +30,7 @@ import findiff import numpy as np from numpy.typing import NDArray -from pydantic import ConfigDict -from pydantic_numpy.model import NumpyModel -from pydantic_numpy.typing import NpNDArray # Array of any type or dimensionality +from pydantic import BaseModel, ConfigDict, Field from scipy import io, sparse from scipy.sparse import csc_matrix as CSC from scipy.sparse import csr_matrix as CSR @@ -96,10 +94,16 @@ def solenoid_1d_structural_rhs( return rhs -class SolenoidStress1D(NumpyModel): - model_config = ConfigDict(validate_assignment=True, frozen=True, extra="forbid") +class SolenoidStress1D(BaseModel): + model_config = ConfigDict( + validate_assignment=True, + frozen=True, + extra="forbid", + populate_by_name=True, + serialize_by_alias=True, + ) - rgrid: NpNDArray + rgrid_: list[float] = Field(alias="rgrid") """[m] 1D grid of r-coordinates""" elasticity_modulus: float """[Pa] diagonal terms in material property matrix""" @@ -113,6 +117,11 @@ class SolenoidStress1D(NumpyModel): can be useful as a linear operator. Alternatively, the system can be solved using an LU solver with reduced memory usage and better numerical conditioning.""" + @cached_property + def rgrid(self) -> NDArray[np.float64]: + """[m] 1D grid of r-coordinates.""" + return np.asarray(self.rgrid_) + @cached_property def operators(self) -> SolenoidStress1DOperators: """ diff --git a/pyproject.toml b/pyproject.toml index 99304518..ba71cae6 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -13,11 +13,10 @@ classifiers = [ "Programming Language :: Python :: Implementation :: CPython", ] dependencies = [ - "numpy >= 2", + "numpy >= 1.23.5", "interpn[pydantic]>=0.8.2,<0.12", "findiff ~= 0.13.1", "pydantic ~= 2.0", - "pydantic-numpy ~= 6.0", "scipy ~= 1.8", ] license = "MIT" diff --git a/test/test_funcs.py b/test/test_funcs.py index 14b908d9..29f6336a 100644 --- a/test/test_funcs.py +++ b/test/test_funcs.py @@ -6,6 +6,7 @@ from interpn import MultilinearRectilinear from numpy.typing import NDArray from scipy.constants import mu_0 +from scipy.integrate import trapezoid from scipy.special import ellipe, ellipk import cfsem @@ -109,10 +110,10 @@ def _flux_density_circular_filament_numerical( a1 = (a**2 + r**2 + z**2 - 2.0 * r * a * np.sin(phis)) ** -1.5 # Shared denominator Brs = a0 * z * np.sin(phis) * a1 - Br = np.trapezoid(x=phis, y=Brs) # [T] + Br = trapezoid(x=phis, y=Brs) # [T] Bzs = a0 * (a - r * np.sin(phis)) * a1 - Bz = np.trapezoid(x=phis, y=Bzs) # [T] + Bz = trapezoid(x=phis, y=Bzs) # [T] return Br, Bz # [T] diff --git a/uv.lock b/uv.lock index 66c82ba3..0cf09902 100644 --- a/uv.lock +++ b/uv.lock @@ -51,7 +51,6 @@ dependencies = [ { name = "numpy", version = "2.2.6", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, { name = "numpy", version = "2.4.4", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "pydantic" }, - { name = "pydantic-numpy" }, { name = "scipy", version = "1.15.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, { name = "scipy", version = "1.17.1", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, ] @@ -76,9 +75,8 @@ dev = [ requires-dist = [ { name = "findiff", specifier = "~=0.13.1" }, { name = "interpn", extras = ["pydantic"], specifier = ">=0.8.2,<0.12" }, - 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