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DESCRIPTION
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Package: GermlineVarDBTools
Title: GermlineVarDBTools
Version: 0.0.0.9000
Authors@R:
person(given = "Clement",
family = "BENOIT",
role = c("aut", "cre"),
email = "benoitclement.data@gmail.com")
Description: An R package containing a tool suite to manage a local structured database for germline genomic variants. The resulting database can be then consulted and annotated with https://github.com/clbenoit/GermlineVarDB Web App.
License: GPL-3 + file LICENSE
biocViews:
Imports:
AnnotationDbi,
DBI,
GenomicFeatures,
GenomicRanges,
IRanges,
RSQLite,
VariantAnnotation,
crew,
digest,
dplyr,
httr,
jsonlite,
magrittr,
promises,
reshape2,
rlang,
stringr,
tibble,
tidyr,
JBrowseR
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.1
Depends:
R (>= 4.1.0)
Remotes:
ThinkR-open/attachment
Suggests:
spelling,
testthat (>= 3.0.0),
usethis,
attachment (>= 0.3.1),
pkgload,
processx,
later
Config/testthat/edition: 3
Language: en-US