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decide on how to handle nans #170

@brookehus

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@brookehus

Right now, we have a nan checker implemented in the geometry class, which raises a ValueError if a nan is found and is called in the following geometry methods:

These methods are invoked during network operations which occur both in training and in simulating. In simulating, we may not want a straight out ValueError - we likely want the option to get some information so we can debug what's going on.

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