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Avoid Compounding Non-Idealities #119

@coreylammie

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@coreylammie

To avoid compounding non-idealities, two seperate conductance matrices can be stored for each layer/module: (1) with all non-idealities applied, and (2) with no non-idealities applied. A list can be added to each layer/module containing all of the applied non-idealities, so that these can be reapplied to the conductance matrix with no non-idealities are applied when new conductance values/weights are programmed.

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