From 72ea4075d7ad9d80adf96d37494bd4098ff56430 Mon Sep 17 00:00:00 2001 From: David Landa Marban Date: Wed, 7 Jan 2026 13:03:34 +0100 Subject: [PATCH] doi to published paper --- .github/workflows/CI.yml | 2 +- CITATION.cff | 8 ++++++-- README.md | 2 +- docs/_sources/about.rst.txt | 4 ++++ docs/_sources/examples.rst.txt | 2 +- docs/_sources/publication.rst.txt | 2 +- docs/about.html | 9 ++++++++- docs/examples.html | 2 +- docs/index.html | 5 ++++- docs/publication.html | 2 +- docs/searchindex.js | 2 +- docs/text/about.rst | 4 ++++ docs/text/examples.rst | 2 +- docs/text/publication.rst | 2 +- 14 files changed, 35 insertions(+), 13 deletions(-) diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml index 8da0841..498e2e8 100644 --- a/.github/workflows/CI.yml +++ b/.github/workflows/CI.yml @@ -52,7 +52,7 @@ jobs: - name: Run the tests run: | - pytest -x --cov=pofff --cov-report term-missing tests/ + pytest --cov=pofff --exitfirst --cov-report term-missing tests/ - name: Build documentation run: | diff --git a/CITATION.cff b/CITATION.cff index 5e536d4..7b7a04c 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -18,5 +18,9 @@ authors: orcid: "https://orcid.org/0000-0002-2610-8322" title: "Performance of an open-source image-based history matching framework for CO2 storage" -year: 2025 -url: "https://arxiv.org/abs/2510.20614" +year: 2026 +doi: 10.1007/s11242-025-02275-0 +volume: 153 +isbn: 1573-1634 +number: 2 +journal: Transport in Porous Media diff --git a/README.md b/README.md index 48c14c9..5c33b40 100644 --- a/README.md +++ b/README.md @@ -58,7 +58,7 @@ See the [_examples_](https://cssr-tools.github.io/pofff/examples.html) in the [_ ## Citing -* Landa-Marbán, D., Sandve, T.H., Both, J.W., Nordbotten, J.M., and Gasda, S.E., 2025. Performance of an open-source image-based history matching framework for CO2 storage. https://arxiv.org/abs/2510.20614. +* Landa-Marbán, D., Sandve, T.H., Both, J.W., Nordbotten, J.M., and Gasda, S.E., 2026. Performance of an open-source image-based history matching framework for CO2 storage. Transp Porous Med 153, 21, https://doi.org/10.1007/s11242-025-02275-0. ## About pofff The pofff package is funded by the [_Center for Sustainable Subsurface Resources (CSSR)_](https://cssr.no) [project no. 331841]. diff --git a/docs/_sources/about.rst.txt b/docs/_sources/about.rst.txt index 9260354..93fdb65 100644 --- a/docs/_sources/about.rst.txt +++ b/docs/_sources/about.rst.txt @@ -9,3 +9,7 @@ The **pofff** tool is funded by the `Center for Sustainable Subsurface Resources Contributions are more than welcome using the fork and pull request approach. For a new feature, please request this raising an issue. + +Citing +------ +Landa-Marbán, D., Sandve, T.H., Both, J.W., Nordbotten, J.M., and Gasda, S.E., 2026. Performance of an open-source image-based history matching framework for CO2 storage. Transp Porous Med 153, 21, https://doi.org/10.1007/s11242-025-02275-0. diff --git a/docs/_sources/examples.rst.txt b/docs/_sources/examples.rst.txt index 0be38e9..3cc4899 100644 --- a/docs/_sources/examples.rst.txt +++ b/docs/_sources/examples.rst.txt @@ -22,7 +22,7 @@ Adding your results =================== The `publication `_ folder contains the configuration files used for the results in the -`pofff paper `_ (see :doc:`publication <./publication>` for details in the steps to reproduce the figures in the paper). +`pofff paper `_ (see :doc:`publication <./publication>` for details in the steps to reproduce the figures in the paper). .. code-block:: bash diff --git a/docs/_sources/publication.rst.txt b/docs/_sources/publication.rst.txt index 2af9a6a..57e86d2 100644 --- a/docs/_sources/publication.rst.txt +++ b/docs/_sources/publication.rst.txt @@ -2,7 +2,7 @@ Publication *********** -This section adds details in the steps to reproduce the figures in the `pofff paper `_. +This section adds details in the steps to reproduce the figures in the `pofff paper `_. To this end, we use our friend `plopm `_. All commands are executed from the pofff main directory, and the figures are saved in new folders corresponding to the figure number. diff --git a/docs/about.html b/docs/about.html index 3c36a19..c789450 100644 --- a/docs/about.html +++ b/docs/about.html @@ -53,7 +53,10 @@
  • Output folder
  • Contributing
  • Related
    • -
  • About pofff
    • +
  • About pofff +
    • @@ -86,6 +89,10 @@

    About pofffCenter for Sustainable Subsurface Resources (CSSR) [project no. 331841].

    Contributions are more than welcome using the fork and pull request approach.

    For a new feature, please request this raising an issue.

    +
    +

    Citing

    +

    Landa-Marbán, D., Sandve, T.H., Both, J.W., Nordbotten, J.M., and Gasda, S.E., 2026. Performance of an open-source image-based history matching framework for CO2 storage. Transp Porous Med 153, 21, https://doi.org/10.1007/s11242-025-02275-0.

    +
    diff --git a/docs/examples.html b/docs/examples.html index 1b20ae1..3e4649f 100644 --- a/docs/examples.html +++ b/docs/examples.html @@ -104,7 +104,7 @@

    Hello world

    Adding your results

    The publication folder contains the configuration files used for the results in the -pofff paper (see publication for details in the steps to reproduce the figures in the paper).

    +pofff paper (see publication for details in the steps to reproduce the figures in the paper).

    pofff -i results.toml -o YOURS -m single -t 24,48,72,96,120 -f all
    diff --git a/docs/index.html b/docs/index.html index 732a250..b1c2104 100644 --- a/docs/index.html +++ b/docs/index.html @@ -143,7 +143,10 @@

    Welcome to pofff’s documentation!pymm -
  • About pofff
    • +
  • About pofff +
    • diff --git a/docs/publication.html b/docs/publication.html index 8b28e67..b8ef67a 100644 --- a/docs/publication.html +++ b/docs/publication.html @@ -83,7 +83,7 @@

    Publication

    -

    This section adds details in the steps to reproduce the figures in the pofff paper.

    +

    This section adds details in the steps to reproduce the figures in the pofff paper.

    To this end, we use our friend plopm. All commands are executed from the pofff main directory, and the figures are saved in new folders corresponding to the figure number.

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\ No newline at end of file diff --git a/docs/text/about.rst b/docs/text/about.rst index 9260354..93fdb65 100644 --- a/docs/text/about.rst +++ b/docs/text/about.rst @@ -9,3 +9,7 @@ The **pofff** tool is funded by the `Center for Sustainable Subsurface Resources Contributions are more than welcome using the fork and pull request approach. For a new feature, please request this raising an issue. + +Citing +------ +Landa-Marbán, D., Sandve, T.H., Both, J.W., Nordbotten, J.M., and Gasda, S.E., 2026. Performance of an open-source image-based history matching framework for CO2 storage. Transp Porous Med 153, 21, https://doi.org/10.1007/s11242-025-02275-0. diff --git a/docs/text/examples.rst b/docs/text/examples.rst index 0be38e9..3cc4899 100644 --- a/docs/text/examples.rst +++ b/docs/text/examples.rst @@ -22,7 +22,7 @@ Adding your results =================== The `publication `_ folder contains the configuration files used for the results in the -`pofff paper `_ (see :doc:`publication <./publication>` for details in the steps to reproduce the figures in the paper). +`pofff paper `_ (see :doc:`publication <./publication>` for details in the steps to reproduce the figures in the paper). .. code-block:: bash diff --git a/docs/text/publication.rst b/docs/text/publication.rst index 2af9a6a..57e86d2 100644 --- a/docs/text/publication.rst +++ b/docs/text/publication.rst @@ -2,7 +2,7 @@ Publication *********** -This section adds details in the steps to reproduce the figures in the `pofff paper `_. +This section adds details in the steps to reproduce the figures in the `pofff paper `_. To this end, we use our friend `plopm `_. All commands are executed from the pofff main directory, and the figures are saved in new folders corresponding to the figure number.