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This repository was archived by the owner on Oct 12, 2022. It is now read-only.
This happens often when using small images, either because:
these images have few cells (one to three)
the cells are missing because they are near the image border
or simply because they are small in pixels (i.e. 60x60).
We think that CellID might be using the found cell's x/y pos to align the image (instead of the entire image itself).
Example
Time A:
Time B:
Result: note that the yellow line connects points with the same cellID along frames, and while the yellow trace jumps to the other cells position, a new cellID is generated for the remaining mask.
Description
This happens often when using small images, either because:
We think that CellID might be using the found cell's x/y pos to align the image (instead of the entire image itself).
Example
Time A:
Time B:
Result: note that the yellow line connects points with the same cellID along frames, and while the yellow trace jumps to the other cells position, a new cellID is generated for the remaining mask.