diff --git a/README.md b/README.md index a184970..eaf8b54 100644 --- a/README.md +++ b/README.md @@ -3,12 +3,14 @@ pydt Pitman Yor diffusion tree sampler -To compile you will need the Boost libraries. e.g. if boost is in ~/boost_1_51_0/ then run: - +To compile you will need the Boost libraries. e.g. if boost is in `~/boost_1_51_0/` then run: +``` g++ -O3 main.cpp -I ~/boost_1_51_0/ -o pydt +``` To run on the CCLE data provided here you can then run for example - +``` ./pydt 0 1.5 sensitivity.txt cell_names.txt 1000 1 1 +``` -Just running pydt with no args will explain what these inputs are. \ No newline at end of file +Just running pydt with no args will explain what these inputs are.