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utils.py
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141 lines (125 loc) · 6.26 KB
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import torch
from sklearn.metrics import roc_auc_score, mean_squared_error
import numpy as np
from augmentations import embed_data_mask
import torch.nn as nn
def make_default_mask(x):
mask = np.ones_like(x)
mask[:,-1] = 0
return mask
def tag_gen(tag,y):
return np.repeat(tag,len(y['data']))
def count_parameters(model):
return sum(p.numel() for p in model.parameters() if p.requires_grad)
def get_scheduler(args, optimizer):
if args.scheduler == 'cosine':
scheduler = torch.optim.lr_scheduler.CosineAnnealingLR(optimizer, args.epochs)
elif args.scheduler == 'linear':
scheduler = torch.optim.lr_scheduler.MultiStepLR(optimizer,
milestones=[args.epochs // 2.667, args.epochs // 1.6, args.epochs // 1.142], gamma=0.1)
return scheduler
def imputations_acc_justy(model,dloader,device):
model.eval()
m = nn.Softmax(dim=1)
y_test = torch.empty(0).to(device)
y_pred = torch.empty(0).to(device)
prob = torch.empty(0).to(device)
with torch.no_grad():
for i, data in enumerate(dloader, 0):
x_categ, x_cont, cat_mask, con_mask = data[0].to(device), data[1].to(device),data[2].to(device),data[3].to(device)
_ , x_categ_enc, x_cont_enc = embed_data_mask(x_categ, x_cont, cat_mask, con_mask,model)
reps = model.transformer(x_categ_enc, x_cont_enc)
y_reps = reps[:,model.num_categories-1,:]
y_outs = model.mlpfory(y_reps)
# import ipdb; ipdb.set_trace()
y_test = torch.cat([y_test,x_categ[:,-1].float()],dim=0)
y_pred = torch.cat([y_pred,torch.argmax(m(y_outs), dim=1).float()],dim=0)
prob = torch.cat([prob,m(y_outs)[:,-1].float()],dim=0)
correct_results_sum = (y_pred == y_test).sum().float()
acc = correct_results_sum/y_test.shape[0]*100
auc = roc_auc_score(y_score=prob.cpu(), y_true=y_test.cpu())
return acc, auc
def multiclass_acc_justy(model,dloader,device):
model.eval()
vision_dset = True
m = nn.Softmax(dim=1)
y_test = torch.empty(0).to(device)
y_pred = torch.empty(0).to(device)
prob = torch.empty(0).to(device)
with torch.no_grad():
for i, data in enumerate(dloader, 0):
x_categ, x_cont, cat_mask, con_mask = data[0].to(device), data[1].to(device),data[2].to(device),data[3].to(device)
_ , x_categ_enc, x_cont_enc = embed_data_mask(x_categ, x_cont, cat_mask, con_mask,model,vision_dset)
reps = model.transformer(x_categ_enc, x_cont_enc)
y_reps = reps[:,model.num_categories-1,:]
y_outs = model.mlpfory(y_reps)
# import ipdb; ipdb.set_trace()
y_test = torch.cat([y_test,x_categ[:,-1].float()],dim=0)
y_pred = torch.cat([y_pred,torch.argmax(m(y_outs), dim=1).float()],dim=0)
correct_results_sum = (y_pred == y_test).sum().float()
acc = correct_results_sum/y_test.shape[0]*100
return acc, 0
def classification_scores(model, dloader, device, task,vision_dset):
model.eval()
m = nn.Softmax(dim=1)
y_test = torch.empty(0).to(device)
y_pred = torch.empty(0).to(device)
prob = torch.empty(0).to(device)
with torch.no_grad():
for i, data in enumerate(dloader, 0):
x_categ, x_cont, y_gts, cat_mask, con_mask = data[0].to(device), data[1].to(device),data[2].to(device),data[3].to(device),data[4].to(device)
_ , x_categ_enc, x_cont_enc = embed_data_mask(x_categ, x_cont, cat_mask, con_mask,model,vision_dset)
reps = model.transformer(x_categ_enc, x_cont_enc)
y_reps = reps[:,0,:]
y_outs = model.mlpfory(y_reps)
# import ipdb; ipdb.set_trace()
y_test = torch.cat([y_test,y_gts.squeeze().float()],dim=0)
y_pred = torch.cat([y_pred,torch.argmax(y_outs, dim=1).float()],dim=0)
if task == 'binary':
prob = torch.cat([prob,m(y_outs)[:,-1].float()],dim=0)
correct_results_sum = (y_pred == y_test).sum().float()
acc = correct_results_sum/y_test.shape[0]*100
auc = 0
if task == 'binary':
auc = roc_auc_score(y_score=prob.cpu(), y_true=y_test.cpu())
return acc.cpu().numpy(), auc
def mean_sq_error(model, dloader, device, vision_dset):
model.eval()
y_test = torch.empty(0).to(device)
y_pred = torch.empty(0).to(device)
with torch.no_grad():
for i, data in enumerate(dloader, 0):
x_categ, x_cont, y_gts, cat_mask, con_mask = data[0].to(device), data[1].to(device),data[2].to(device),data[3].to(device),data[4].to(device)
_ , x_categ_enc, x_cont_enc = embed_data_mask(x_categ, x_cont, cat_mask, con_mask,model,vision_dset)
reps = model.transformer(x_categ_enc, x_cont_enc)
y_reps = reps[:,0,:]
y_outs = model.mlpfory(y_reps)
y_test = torch.cat([y_test,y_gts.squeeze().float()],dim=0)
y_pred = torch.cat([y_pred,y_outs],dim=0)
# import ipdb; ipdb.set_trace()
rmse = mean_squared_error(y_test.cpu(), y_pred.cpu(), squared=False)
return rmse
def generate_outputs(model, dloader, device, task,vision_dset):
model.eval()
m = nn.Softmax(dim=1)
y_test = torch.empty(0).to(device)
y_pred = torch.empty(0).to(device)
prob = torch.empty(0).to(device)
with torch.no_grad():
for i, data in enumerate(dloader, 0):
x_categ, x_cont, y_gts, cat_mask, con_mask = data[0].to(device), data[1].to(device),data[2].to(device),data[3].to(device),data[4].to(device)
_ , x_categ_enc, x_cont_enc = embed_data_mask(x_categ, x_cont, cat_mask, con_mask,model,vision_dset)
reps = model.transformer(x_categ_enc, x_cont_enc)
y_reps = reps[:,0,:]
y_outs = model.mlpfory(y_reps)
# import ipdb; ipdb.set_trace()
y_test = torch.cat([y_test,y_gts.squeeze().float()],dim=0)
if task == 'regression':
y_pred = torch.cat([y_pred,y_outs],dim=0)
else:
y_pred = torch.cat([y_pred,torch.argmax(y_outs, dim=1).float()],dim=0)
if task == 'binary':
prob = torch.cat([prob,m(y_outs)[:,-1].float()],dim=0)
if task == 'binary':
return prob.cpu(), y_test.cpu()
return y_pred.cpu(), y_test.cpu()