From 4c6c7eba5c22a3e44278dfd80e3b42aaaad29c1c Mon Sep 17 00:00:00 2001
From: Tim Coalson <tsc5yc@mst.edu>
Date: Wed, 28 Feb 2018 17:39:46 -0600
Subject: [PATCH] fix makefiles to point to the ELC1.04 folder, as the previous
 folder was removed

---
 src/MSM/Makefile       | 2 +-
 src/MSMRegLib/Makefile | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/src/MSM/Makefile b/src/MSM/Makefile
index 1faf20f..4119ff3 100644
--- a/src/MSM/Makefile
+++ b/src/MSM/Makefile
@@ -5,7 +5,7 @@ PROJNAME= MSM
 USRCXXFLAGS=-g
 HOCR=True 
 
-USRINCFLAGS=-I${INC_NEWMAT} -I${INC_NEWRAN} -I${INC_ZLIB} -I${INC_CPROB} -I${INC_PROB}  -I${INC_GD}  -I${INC_GDC} -I${INC_PNG} -I${INC_BOOST} -I./include -I${FSLDEVDIR}/include -I${FSLDEVDIR}/extras/include
+USRINCFLAGS=-I${INC_NEWMAT} -I${INC_NEWRAN} -I${INC_ZLIB} -I${INC_CPROB} -I${INC_PROB}  -I${INC_GD}  -I${INC_GDC} -I${INC_PNG} -I${INC_BOOST} -I./include -I${FSLDEVDIR}/include -I${FSLDEVDIR}/extras/include -I${FSLDEVDIR}/extras/ELC1.04
 USRLDFLAGS=-L${LIB_NEWMAT} -L${LIB_NEWRAN} -L${LIB_ZLIB}  -L${LIB_CPROB} -L${LIB_PROB} -L${LIB_GDC} -L${LIB_PNG} -L${LIB_GD}   -L. -L${FSLDEVDIR}/lib  -L${FSLDEVDIR}/extras/lib
 LIBS= -lmeshreg -lfastpd -ldiscrete -lnewmeshclass -lfslsurface -lgiftiio -lmm  -lexpat  -lfslvtkio -lnewimage  -lmiscmaths -lmiscplot -lmiscpic -lfslio -lniftiio -lnewmat -lutils  -lbint -lnewran -lprob -lznz -lgdc -lgd -lpng  -lz
 
diff --git a/src/MSMRegLib/Makefile b/src/MSMRegLib/Makefile
index 42e5a37..82f8243 100644
--- a/src/MSMRegLib/Makefile
+++ b/src/MSMRegLib/Makefile
@@ -5,7 +5,7 @@ PROJNAME = MeshReg
 USRCXXFLAGS=-g 
 HOCR=True
 
-USRINCFLAGS =-I${INC_NEWMAT} -I${INC_NEWRAN} -I${INC_ZLIB} -I${INC_CPROB} -I${INC_PROB}  -I${INC_GD}  -I${INC_GDC} -I${INC_PNG} -I${INC_BOOST} -I${FSLDEVDIR}/include -I${FSLDEVDIR}/extras/include
+USRINCFLAGS =-I${INC_NEWMAT} -I${INC_NEWRAN} -I${INC_ZLIB} -I${INC_CPROB} -I${INC_PROB}  -I${INC_GD}  -I${INC_GDC} -I${INC_PNG} -I${INC_BOOST} -I${FSLDEVDIR}/include -I${FSLDEVDIR}/extras/include -I${FSLDEVDIR}/extras/ELC1.04
 USRLDFLAGS =-L${LIB_NEWMAT} -L${LIB_NEWRAN} -L${LIB_ZLIB}  -L${LIB_CPROB} -L${LIB_PROB} -L${LIB_GDC} -L${LIB_PNG} -L${LIB_GD}   -L. -L${FSLDEVDIR}/lib  -L${FSLDEVDIR}/extras/lib
 LIBS= -lmsm -lfastpd -ldiscrete -lnewmeshclass -lfslsurface -lgiftiio -lmm  -lexpat  -lfslvtkio -lnewimage  -lmiscmaths -lmiscplot -lmiscpic -lfslio -lniftiio -lnewmat -lutils  -lbint -lnewran -lprob -lznz -lgdc -lgd -lpng  -lz
 MSMLIBOBJS= ContinuosOpt.o meshmodify.o meshreg.o