Hi all,
I encountered this error message:
multiprocessing.pool.RemoteTraceback:
"""
Traceback (most recent call last):
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/multiprocessing/pool.py", line 125, in worker
result = (True, func(*args, **kwds))
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/multiprocessing/pool.py", line 48, in mapstar
return list(map(*args))
File "/home/create/software/CrisprOpenDB/CrisprOpenDB/CrisprOpenDB_HostID.py", line 137, in _findHost
fasta_result_table.to_csv("{}.csv".format(fasta_result_table["Query"].iloc[0]))
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/site-packages/pandas/core/indexing.py", line 895, in getitem
return self._getitem_axis(maybe_callable, axis=axis)
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/site-packages/pandas/core/indexing.py", line 1501, in _getitem_axis
self._validate_integer(key, axis)
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/site-packages/pandas/core/indexing.py", line 1444, in _validate_integer
raise IndexError("single positional indexer is out-of-bounds")
IndexError: single positional indexer is out-of-bounds
"""
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "CL_Interface.py", line 42, in
results = phf.identify(args.input, args.mismatch, args.aligner, args.report, args.table, args.unknown, args.num_threads)
File "/home/create/software/CrisprOpenDB/CrisprOpenDB/CrisprOpenDB_HostID.py", line 273, in identify
results = pool.map(self._findHost, jobs)
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/multiprocessing/pool.py", line 364, in map
return self._map_async(func, iterable, mapstar, chunksize).get()
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/multiprocessing/pool.py", line 771, in get
raise self._value
IndexError: single positional indexer is out-of-bounds
May I learn hot to fix it? Many thanks!
Hi all,
I encountered this error message:
multiprocessing.pool.RemoteTraceback:
"""
Traceback (most recent call last):
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/multiprocessing/pool.py", line 125, in worker
result = (True, func(*args, **kwds))
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/multiprocessing/pool.py", line 48, in mapstar
return list(map(*args))
File "/home/create/software/CrisprOpenDB/CrisprOpenDB/CrisprOpenDB_HostID.py", line 137, in _findHost
fasta_result_table.to_csv("{}.csv".format(fasta_result_table["Query"].iloc[0]))
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/site-packages/pandas/core/indexing.py", line 895, in getitem
return self._getitem_axis(maybe_callable, axis=axis)
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/site-packages/pandas/core/indexing.py", line 1501, in _getitem_axis
self._validate_integer(key, axis)
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/site-packages/pandas/core/indexing.py", line 1444, in _validate_integer
raise IndexError("single positional indexer is out-of-bounds")
IndexError: single positional indexer is out-of-bounds
"""
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "CL_Interface.py", line 42, in
results = phf.identify(args.input, args.mismatch, args.aligner, args.report, args.table, args.unknown, args.num_threads)
File "/home/create/software/CrisprOpenDB/CrisprOpenDB/CrisprOpenDB_HostID.py", line 273, in identify
results = pool.map(self._findHost, jobs)
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/multiprocessing/pool.py", line 364, in map
return self._map_async(func, iterable, mapstar, chunksize).get()
File "/home/create/software/miniconda3/envs/CrisprOpenDB/lib/python3.8/multiprocessing/pool.py", line 771, in get
raise self._value
IndexError: single positional indexer is out-of-bounds
May I learn hot to fix it? Many thanks!