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Compilation Error #10

@AxelDora

Description

@AxelDora

Describe the bug

Compiling the code on the HPC returns an error in the code that seems to be linked to how functions/constructors are defined in the code

Expected Result
Full compilation

Actual Result
I got a litany of errors which are given below:

[ 19%] Building CXX object channelflow/CMakeFiles/chflow.dir/nse.cpp.o
cd /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build/channelflow && /bgsys/drivers/ppcfloor/comm/xl.ndebug/bin/mpicxx -Dchflow_EXPORTS -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build -isystem /bglocal/cn/pub/NetCDF/4.3.3.1/mpi/include -isystem /bglocal/cn/pub/HDF5/1.10.1_shared/seq/include -isystem /bglocal/cn/pub/FFTW/3.3.7_omp_shared/include -isystem /workgpfs/rech/lau/rlau000/TV-channelflow/channelflow-devel-1.5.1-turing/eigen3 -O3 -DNDEBUG -fPIC -Wall -Werror -pedantic -std=c++11 -o CMakeFiles/chflow.dir/bandedtridiag.cpp.o -c /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/bandedtridiag.cpp
cd /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build/channelflow && /bgsys/drivers/ppcfloor/comm/xl.ndebug/bin/mpicxx -Dchflow_EXPORTS -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build -isystem /bglocal/cn/pub/NetCDF/4.3.3.1/mpi/include -isystem /bglocal/cn/pub/HDF5/1.10.1_shared/seq/include -isystem /bglocal/cn/pub/FFTW/3.3.7_omp_shared/include -isystem /workgpfs/rech/lau/rlau000/TV-channelflow/channelflow-devel-1.5.1-turing/eigen3 -O3 -DNDEBUG -fPIC -Wall -Werror -pedantic -std=c++11 -o CMakeFiles/chflow.dir/basisfunc.cpp.o -c /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/basisfunc.cpp
cd /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build/channelflow && /bgsys/drivers/ppcfloor/comm/xl.ndebug/bin/mpicxx -Dchflow_EXPORTS -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build -isystem /bglocal/cn/pub/NetCDF/4.3.3.1/mpi/include -isystem /bglocal/cn/pub/HDF5/1.10.1_shared/seq/include -isystem /bglocal/cn/pub/FFTW/3.3.7_omp_shared/include -isystem /workgpfs/rech/lau/rlau000/TV-channelflow/channelflow-devel-1.5.1-turing/eigen3 -O3 -DNDEBUG -fPIC -Wall -Werror -pedantic -std=c++11 -o CMakeFiles/chflow.dir/chebyshev.cpp.o -c /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/chebyshev.cpp
cd /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build/channelflow && /bgsys/drivers/ppcfloor/comm/xl.ndebug/bin/mpicxx -Dchflow_EXPORTS -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build -isystem /bglocal/cn/pub/NetCDF/4.3.3.1/mpi/include -isystem /bglocal/cn/pub/HDF5/1.10.1_shared/seq/include -isystem /bglocal/cn/pub/FFTW/3.3.7_omp_shared/include -isystem /workgpfs/rech/lau/rlau000/TV-channelflow/channelflow-devel-1.5.1-turing/eigen3 -O3 -DNDEBUG -fPIC -Wall -Werror -pedantic -std=c++11 -o CMakeFiles/chflow.dir/cfmpi.cpp.o -c /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.cpp
cd /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build/channelflow && /bgsys/drivers/ppcfloor/comm/xl.ndebug/bin/mpicxx -Dchflow_EXPORTS -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build -isystem /bglocal/cn/pub/NetCDF/4.3.3.1/mpi/include -isystem /bglocal/cn/pub/HDF5/1.10.1_shared/seq/include -isystem /bglocal/cn/pub/FFTW/3.3.7_omp_shared/include -isystem /workgpfs/rech/lau/rlau000/TV-channelflow/channelflow-devel-1.5.1-turing/eigen3 -O3 -DNDEBUG -fPIC -Wall -Werror -pedantic -std=c++11 -o CMakeFiles/chflow.dir/diffops.cpp.o -c /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/diffops.cpp
cd /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build/channelflow && /bgsys/drivers/ppcfloor/comm/xl.ndebug/bin/mpicxx -Dchflow_EXPORTS -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build -isystem /bglocal/cn/pub/NetCDF/4.3.3.1/mpi/include -isystem /bglocal/cn/pub/HDF5/1.10.1_shared/seq/include -isystem /bglocal/cn/pub/FFTW/3.3.7_omp_shared/include -isystem /workgpfs/rech/lau/rlau000/TV-channelflow/channelflow-devel-1.5.1-turing/eigen3 -O3 -DNDEBUG -fPIC -Wall -Werror -pedantic -std=c++11 -o CMakeFiles/chflow.dir/dnsflags.cpp.o -c /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/dnsflags.cpp
cd /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build/channelflow && /bgsys/drivers/ppcfloor/comm/xl.ndebug/bin/mpicxx -Dchflow_EXPORTS -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build -isystem /bglocal/cn/pub/NetCDF/4.3.3.1/mpi/include -isystem /bglocal/cn/pub/HDF5/1.10.1_shared/seq/include -isystem /bglocal/cn/pub/FFTW/3.3.7_omp_shared/include -isystem /workgpfs/rech/lau/rlau000/TV-channelflow/channelflow-devel-1.5.1-turing/eigen3 -O3 -DNDEBUG -fPIC -Wall -Werror -pedantic -std=c++11 -o CMakeFiles/chflow.dir/dnsalgo.cpp.o -c /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/dnsalgo.cpp
cd /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build/channelflow && /bgsys/drivers/ppcfloor/comm/xl.ndebug/bin/mpicxx -Dchflow_EXPORTS -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn -I/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build -isystem /bglocal/cn/pub/NetCDF/4.3.3.1/mpi/include -isystem /bglocal/cn/pub/HDF5/1.10.1_shared/seq/include -isystem /bglocal/cn/pub/FFTW/3.3.7_omp_shared/include -isystem /workgpfs/rech/lau/rlau000/TV-channelflow/channelflow-devel-1.5.1-turing/eigen3 -O3 -DNDEBUG -fPIC -Wall -Werror -pedantic -std=c++11 -o CMakeFiles/chflow.dir/nse.cpp.o -c /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/nse.cpp
In file included from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.cpp:10:0:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:113:18: error: ‘channelflow::CfMPI::CfMPI’ names constructor
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h: In static member function ‘static channelflow::CfMPI_single& channelflow::CfMPI_single::getInstance()’:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: error: no matching function for call to ‘channelflow::CfMPI_single::CfMPI_single(int, int)’
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: note: candidate is:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: channelflow::CfMPI_single::CfMPI_single(const channelflow::CfMPI_single&)
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: candidate expects 1 argument, 2 provided
In file included from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/chebyshev.h:15:0,
from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/chebyshev.cpp:13:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:113:18: error: ‘channelflow::CfMPI::CfMPI’ names constructor
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h: In static member function ‘static channelflow::CfMPI_single& channelflow::CfMPI_single::getInstance()’:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: error: no matching function for call to ‘channelflow::CfMPI_single::CfMPI_single(int, int)’
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: note: candidate is:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: channelflow::CfMPI_single::CfMPI_single(const channelflow::CfMPI_single&)
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: candidate expects 1 argument, 2 provided
In file included from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/chebyshev.h:15:0,
from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/dnsalgo.h:18,
from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/dnsalgo.cpp:8:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:113:18: error: ‘channelflow::CfMPI::CfMPI’ names constructor
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h: In static member function ‘static channelflow::CfMPI_single& channelflow::CfMPI_single::getInstance()’:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: error: no matching function for call to ‘channelflow::CfMPI_single::CfMPI_single(int, int)’
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: note: candidate is:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: channelflow::CfMPI_single::CfMPI_single(const channelflow::CfMPI_single&)
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: candidate expects 1 argument, 2 provided
In file included from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/chebyshev.h:15:0,
from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/diffops.h:18,
from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/diffops.cpp:8:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:113:18: error: ‘channelflow::CfMPI::CfMPI’ names constructor
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h: In static member function ‘static channelflow::CfMPI_single& channelflow::CfMPI_single::getInstance()’:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: error: no matching function for call to ‘channelflow::CfMPI_single::CfMPI_single(int, int)’
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: note: candidate is:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: channelflow::CfMPI_single::CfMPI_single(const channelflow::CfMPI_single&)
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: candidate expects 1 argument, 2 provided
In file included from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/chebyshev.h:15:0,
from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/dnsflags.h:17,
from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/dnsflags.cpp:8:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:113:18: error: ‘channelflow::CfMPI::CfMPI’ names constructor
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h: In static member function ‘static channelflow::CfMPI_single& channelflow::CfMPI_single::getInstance()’:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: error: no matching function for call to ‘channelflow::CfMPI_single::CfMPI_single(int, int)’
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: note: candidate is:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: channelflow::CfMPI_single::CfMPI_single(const channelflow::CfMPI_single&)
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: candidate expects 1 argument, 2 provided
In file included from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/chebyshev.h:15:0,
from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/diffops.h:18,
from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/nse.h:15,
from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/nse.cpp:6:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:113:18: error: ‘channelflow::CfMPI::CfMPI’ names constructor
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h: In static member function ‘static channelflow::CfMPI_single& channelflow::CfMPI_single::getInstance()’:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: error: no matching function for call to ‘channelflow::CfMPI_single::CfMPI_single(int, int)’
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: note: candidate is:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: channelflow::CfMPI_single::CfMPI_single(const channelflow::CfMPI_single&)
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: candidate expects 1 argument, 2 provided
In file included from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/chebyshev.h:15:0,
from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/basisfunc.h:15,
from /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/basisfunc.cpp:10:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:113:18: error: ‘channelflow::CfMPI::CfMPI’ names constructor
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h: In static member function ‘static channelflow::CfMPI_single& channelflow::CfMPI_single::getInstance()’:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: error: no matching function for call to ‘channelflow::CfMPI_single::CfMPI_single(int, int)’
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:118:42: note: candidate is:
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: channelflow::CfMPI_single::CfMPI_single(const channelflow::CfMPI_single&)
/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/channelflow/cfmpi.h:106:7: note: candidate expects 1 argument, 2 provided
make[2]: *** [channelflow/CMakeFiles/chflow.dir/cfmpi.cpp.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[2]: *** [channelflow/CMakeFiles/chflow.dir/chebyshev.cpp.o] Error 1
make[2]: *** [channelflow/CMakeFiles/chflow.dir/dnsflags.cpp.o] Error 1
make[2]: *** [channelflow/CMakeFiles/chflow.dir/dnsalgo.cpp.o] Error 1
make[2]: *** [channelflow/CMakeFiles/chflow.dir/nse.cpp.o] Error 1
make[2]: *** [channelflow/CMakeFiles/chflow.dir/diffops.cpp.o] Error 1
make[2]: *** [channelflow/CMakeFiles/chflow.dir/basisfunc.cpp.o] Error 1
make[2]: Leaving directory /gpfs5r/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build' make[1]: *** [channelflow/CMakeFiles/chflow.dir/all] Error 2 make[1]: Leaving directory /gpfs5r/workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/build'
make: *** [all] Error 2

Steps to reproduce the issue
This is the code I used to run the compilation:

module purge
module load cmake
module load gcc/4.7.2

BUILDDIR=build
if [ -d "$BUILDDIR" ]
then
rm -rf $BUILDDIR
fi
mkdir $BUILDDIR
cd $BUILDDIR

HDF5_ROOT=/bglocal/cn/pub/HDF5/1.10.1_shared/seq cmake /workgpfs/rech/lau/rlau000/aksh_Turing/CF_Parallel/channelflow2_Tob_Schn/
-DCMAKE_BUILD_TYPE=release
-DWITH_FFTW=/bglocal/cn/pub/FFTW/3.3.7_omp_shared/lib
-DFFTW_LIBDIR=/bglocal/cn/pub/FFTW/3.3.7_omp_shared/lib
-DNETCDF_DIR=/bglocal/cn/pub/NetCDF/4.3.3.1/mpi
-DHDF5_ROOT=/bglocal/cn/pub/HDF5/1.10.1_shared/par
-DWITH_HDF5CXX=ON
-DWITH_GTEST=OFF
-DCMAKE_C_COMPILER=/bgsys/drivers/ppcfloor/comm/xl.ndebug/bin/mpicc
-DCMAKE_CXX_COMPILER=/bgsys/drivers/ppcfloor/comm/xl.ndebug/bin/mpicxx 2>&1 | tee configure.log

VERBOSE=1 make -j 8 2>&1 | tee make.log

================================================================
Any help or guidance would be appreciated. Thanks and best

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