diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index 11b3fead..6d2bc17e 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -13,6 +13,32 @@ cargo fmt cargo clippy --workspace ``` +## Regression tests + +End-to-end regression tests live in `tests/regression/` and compare subcommand +output against committed snapshots using [insta](https://insta.rs/). Each test +runs the `ft` binary against a fixture in `tests/data/`, projects a stable +subset of columns (so trailing/added columns aren't false positives), and +asserts the result matches the snapshot in `tests/regression/snapshots/`. + +Run just the regression suite with: + +```bash +cargo test --test regression +``` + +When you intentionally change output, regenerate snapshots with +[`cargo-insta`](https://insta.rs/docs/cli/): + +```bash +cargo install cargo-insta # one-time +cargo insta test --review # walk through diffs interactively +# or, if the new output is correct as-is: +cargo insta accept +``` + +Inspect the resulting `.snap` diff before committing. + ## Cutting a release The changelog is managed by git-cliff which will run with the release action. diff --git a/Cargo.lock b/Cargo.lock index 754d38db..6aaf7596 100644 --- a/Cargo.lock +++ b/Cargo.lock @@ -1210,6 +1210,17 @@ dependencies = [ "windows-sys 0.59.0", ] +[[package]] +name = "console" +version = "0.16.3" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "d64e8af5551369d19cf50138de61f1c42074ab970f74e99be916646777f8fc87" +dependencies = [ + "encode_unicode", + "libc", + "windows-sys 0.61.2", +] + [[package]] name = "constant_time_eq" version = "0.1.5" @@ -2301,13 +2312,14 @@ dependencies = [ "clap_complete", "clap_mangen", "colored 2.2.0", - "console", + "console 0.15.11", "derive_builder 0.12.0", "duct", "env_logger", "gbdt", "gzp", "indicatif", + "insta", "itertools 0.10.5", "lazy_static", "linear-map", @@ -3401,7 +3413,7 @@ version = "0.17.11" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "183b3088984b400f4cfac3620d5e076c84da5364016b4f49473de574b2586235" dependencies = [ - "console", + "console 0.15.11", "number_prefix", "portable-atomic", "rayon", @@ -3424,6 +3436,18 @@ dependencies = [ "generic-array", ] +[[package]] +name = "insta" +version = "1.47.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "7b4a6248eb93a4401ed2f37dfe8ea592d3cf05b7cf4f8efa867b6895af7e094e" +dependencies = [ + "console 0.16.3", + "once_cell", + "similar", + "tempfile", +] + [[package]] name = "instability" version = "0.3.7" @@ -5745,6 +5769,12 @@ dependencies = [ "quote", ] +[[package]] +name = "similar" +version = "2.7.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "bbbb5d9659141646ae647b42fe094daf6c6192d1620870b449d9557f748b2daa" + [[package]] name = "slab" version = "0.4.10" @@ -7145,7 +7175,7 @@ dependencies = [ "windows-collections", "windows-core 0.61.2", "windows-future", - "windows-link", + "windows-link 0.1.3", "windows-numerics", ] @@ -7191,7 +7221,7 @@ checksum = "c0fdd3ddb90610c7638aa2b3a3ab2904fb9e5cdbecc643ddb3647212781c4ae3" dependencies = [ "windows-implement 0.60.0", "windows-interface 0.59.1", - "windows-link", + "windows-link 0.1.3", "windows-result 0.3.4", "windows-strings 0.4.2", ] @@ -7203,7 +7233,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "fc6a41e98427b19fe4b73c550f060b59fa592d7d686537eebf9385621bfbad8e" dependencies = [ "windows-core 0.61.2", - "windows-link", + "windows-link 0.1.3", "windows-threading", ] @@ -7279,6 +7309,12 @@ version = "0.1.3" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "5e6ad25900d524eaabdbbb96d20b4311e1e7ae1699af4fb28c17ae66c80d798a" +[[package]] +name = "windows-link" +version = "0.2.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "f0805222e57f7521d6a62e36fa9163bc891acd422f971defe97d64e70d0a4fe5" + [[package]] name = "windows-numerics" version = "0.2.0" @@ -7286,7 +7322,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "9150af68066c4c5c07ddc0ce30421554771e528bde427614c61038bc2c92c2b1" dependencies = [ "windows-core 0.61.2", - "windows-link", + "windows-link 0.1.3", ] [[package]] @@ -7313,7 +7349,7 @@ version = "0.3.4" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "56f42bd332cc6c8eac5af113fc0c1fd6a8fd2aa08a0119358686e5160d0586c6" dependencies = [ - "windows-link", + "windows-link 0.1.3", ] [[package]] @@ -7332,7 +7368,7 @@ version = "0.4.2" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "56e6c93f3a0c3b36176cb1327a4958a0353d5d166c2a35cb268ace15e91d3b57" dependencies = [ - "windows-link", + "windows-link 0.1.3", ] [[package]] @@ -7362,6 +7398,15 @@ dependencies = [ "windows-targets 0.53.2", ] +[[package]] +name = "windows-sys" +version = "0.61.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "ae137229bcbd6cdf0f7b80a31df61766145077ddf49416a728b02cb3921ff3fc" +dependencies = [ + "windows-link 0.2.1", +] + [[package]] name = "windows-targets" version = "0.52.6" @@ -7400,7 +7445,7 @@ version = "0.1.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "b66463ad2e0ea3bbf808b7f1d371311c80e115c0b71d60efc142cafbcfb057a6" dependencies = [ - "windows-link", + "windows-link 0.1.3", ] [[package]] diff --git a/Cargo.toml b/Cargo.toml index a37d481d..fbacdf21 100644 --- a/Cargo.toml +++ b/Cargo.toml @@ -83,7 +83,9 @@ vergen-git2 = { version = "1.0.2", features = [ [dev-dependencies] assert_cmd = "2.0.11" +insta = "1.47.2" predicates = "3.0.3" +tempfile = "3.3.0" [features] cli = ["dep:clap", "dep:clap_complete", "dep:clap_mangen", "dep:console"] diff --git a/tests/data/center.small.bed b/tests/data/center.small.bed new file mode 100644 index 00000000..f477a4a8 --- /dev/null +++ b/tests/data/center.small.bed @@ -0,0 +1,3 @@ +chr1 41417257 41417292 CTCF_XL 3.160000e-11 - CAGCAGTTTCTGCCGCATGCCACCAGAGGGCACCA +chr11 44286466 44286501 CTCF_XL 9.450000e-11 + CTGCAGTTGTGCATGCTGGCCACCAGGAGGCACTG +chr15 74054174 74054209 CTCF_XL 3.870000e-11 + AAGCAGTTCCCCCATGTAACCTGCAGGTGGCACCA diff --git a/tests/regression.rs b/tests/regression.rs new file mode 100644 index 00000000..d8ea78ae --- /dev/null +++ b/tests/regression.rs @@ -0,0 +1,12 @@ +#[path = "regression/center.rs"] +mod center; +#[path = "regression/common.rs"] +mod common; +#[path = "regression/extract.rs"] +mod extract; +#[path = "regression/fire.rs"] +mod fire; +#[path = "regression/pileup.rs"] +mod pileup; +#[path = "regression/qc.rs"] +mod qc; diff --git a/tests/regression/center.rs b/tests/regression/center.rs new file mode 100644 index 00000000..f37ff8d3 --- /dev/null +++ b/tests/regression/center.rs @@ -0,0 +1,28 @@ +use super::common::{fixture, run, select_tsv_cols}; + +// Subset to 3 motifs and cap features to ±200 bp of center to keep the +// snapshot small. The center math is uniform across distance, so this +// still exercises liftover + strand flipping for m6a/nuc/msp types. +#[test] +fn center_default() { + let out = run(&[ + "center", + fixture("center.bam").to_str().unwrap(), + "--bed", + fixture("center.small.bed").to_str().unwrap(), + "--dist", + "200", + ]); + insta::assert_snapshot!(select_tsv_cols( + &out, + &[ + "chrom", + "centering_position", + "strand", + "query_name", + "centered_position_type", + "centered_start", + "centered_end", + ] + )); +} diff --git a/tests/regression/common.rs b/tests/regression/common.rs new file mode 100644 index 00000000..3ff1fb0e --- /dev/null +++ b/tests/regression/common.rs @@ -0,0 +1,96 @@ +use std::path::{Path, PathBuf}; +use std::process::Command; + +pub fn ft() -> PathBuf { + env!("CARGO_BIN_EXE_ft").into() +} + +pub fn fixture(name: &str) -> PathBuf { + Path::new(env!("CARGO_MANIFEST_DIR")) + .join("tests/data") + .join(name) +} + +/// Select named columns from TSV output by header name, in the order given. +/// Snapshots only the specified columns so that adding new columns to a +/// command's output doesn't count as a regression. +pub fn select_tsv_cols(tsv: &str, cols: &[&str]) -> String { + let mut lines = tsv.lines(); + let headers: Vec<&str> = lines.next().unwrap_or("").split('\t').collect(); + let indices: Vec = cols + .iter() + .map(|c| { + headers + .iter() + .position(|h| h == c) + .unwrap_or_else(|| panic!("column {c:?} not found; headers: {headers:?}")) + }) + .collect(); + let mut out = cols.join("\t") + "\n"; + for line in lines { + let fields: Vec<&str> = line.split('\t').collect(); + out += &indices + .iter() + .map(|&i| fields.get(i).copied().unwrap_or("")) + .collect::>() + .join("\t"); + out += "\n"; + } + out +} + +/// Select bed12 fields by name from headerless bed12 output. Field names follow +/// the bed12 spec. Emits a synthetic header so snapshots stay self-describing, +/// and lets tests drop redundant/constant columns (score, thick_*, item_rgb) +/// without binding to numeric indices. +pub fn select_bed12_cols(tsv: &str, cols: &[&str]) -> String { + const BED12: &[&str] = &[ + "chrom", + "start", + "end", + "name", + "score", + "strand", + "thick_start", + "thick_end", + "item_rgb", + "block_count", + "block_sizes", + "block_starts", + ]; + let indices: Vec = cols + .iter() + .map(|c| { + BED12 + .iter() + .position(|f| f == c) + .unwrap_or_else(|| panic!("bed12 field {c:?} not in spec; valid: {BED12:?}")) + }) + .collect(); + let mut out = cols.join("\t") + "\n"; + for line in tsv.lines() { + let fields: Vec<&str> = line.split('\t').collect(); + out += &indices + .iter() + .map(|&i| fields.get(i).copied().unwrap_or("")) + .collect::>() + .join("\t"); + out += "\n"; + } + out +} + +/// Run ft with the given args; return stdout as a String. Panics on non-zero exit. +pub fn run(args: &[&str]) -> String { + let out = Command::new(ft()) + .args(args) + .output() + .expect("failed to spawn ft"); + assert!( + out.status.success(), + "ft exited {}\nstderr: {}", + out.status, + String::from_utf8_lossy(&out.stderr) + ); + String::from_utf8(out.stdout).expect("non-UTF8 stdout") +} diff --git a/tests/regression/extract.rs b/tests/regression/extract.rs new file mode 100644 index 00000000..c507e444 --- /dev/null +++ b/tests/regression/extract.rs @@ -0,0 +1,83 @@ +use super::common::{fixture, run, select_bed12_cols, select_tsv_cols}; +use tempfile::NamedTempFile; + +// bed12 columns worth snapshotting: locator + per-record feature data. +// score/thick_*/item_rgb are constants or duplicates for these outputs. +const BED12_COLS: &[&str] = &[ + "chrom", + "start", + "end", + "name", + "strand", + "block_count", + "block_sizes", + "block_starts", +]; + +#[test] +fn extract_m6a() { + let tmp = NamedTempFile::new().unwrap(); + run(&[ + "extract", + fixture("all.bam").to_str().unwrap(), + "--m6a", + tmp.path().to_str().unwrap(), + ]); + let out = std::fs::read_to_string(tmp.path()).unwrap(); + insta::assert_snapshot!(select_bed12_cols(&out, BED12_COLS)); +} + +#[test] +fn extract_nuc() { + let tmp = NamedTempFile::new().unwrap(); + run(&[ + "extract", + fixture("all.bam").to_str().unwrap(), + "--nuc", + tmp.path().to_str().unwrap(), + ]); + let out = std::fs::read_to_string(tmp.path()).unwrap(); + insta::assert_snapshot!(select_bed12_cols(&out, BED12_COLS)); +} + +#[test] +fn extract_msp() { + let tmp = NamedTempFile::new().unwrap(); + run(&[ + "extract", + fixture("all.bam").to_str().unwrap(), + "--msp", + tmp.path().to_str().unwrap(), + ]); + let out = std::fs::read_to_string(tmp.path()).unwrap(); + insta::assert_snapshot!(select_bed12_cols(&out, BED12_COLS)); +} + +// NAPA.bam has FIRE annotations (aq tag) — exercises FIRE in the --all tabular output +// Select MA-relevant columns so new output columns don't count as regressions. +#[test] +fn extract_all_napa() { + let tmp = NamedTempFile::new().unwrap(); + run(&[ + "extract", + fixture("NAPA.bam").to_str().unwrap(), + "--all", + tmp.path().to_str().unwrap(), + ]); + let out = std::fs::read_to_string(tmp.path()).unwrap(); + insta::assert_snapshot!(select_tsv_cols( + &out, + &[ + "#ct", + "st", + "en", + "fiber", + "nuc_starts", + "nuc_lengths", + "msp_starts", + "msp_lengths", + "fire", + "m6a", + ] + )); +} diff --git a/tests/regression/fire.rs b/tests/regression/fire.rs new file mode 100644 index 00000000..7985bfb9 --- /dev/null +++ b/tests/regression/fire.rs @@ -0,0 +1,33 @@ +use super::common::{fixture, run, select_tsv_cols}; +use tempfile::NamedTempFile; + +// Snapshot a stable subset of FIRE feature columns so additions/reorderings +// of bin columns don't count as regressions. +#[test] +fn fire_feats_to_text() { + let tmp = NamedTempFile::new().unwrap(); + run(&[ + "fire", + "--feats-to-text", + fixture("all.bam").to_str().unwrap(), + tmp.path().to_str().unwrap(), + ]); + let out = std::fs::read_to_string(tmp.path()).unwrap(); + insta::assert_snapshot!(select_tsv_cols( + &out, + &[ + "#chrom", + "start", + "end", + "fiber", + "msp_len", + "ccs_passes", + "fiber_m6a_count", + "msp_m6a_count", + "msp_frac_m6a", + "msp_m6a_fc", + "best_m6a_count", + "best_frac_m6a", + ] + )); +} diff --git a/tests/regression/pileup.rs b/tests/regression/pileup.rs new file mode 100644 index 00000000..c0f5ac37 --- /dev/null +++ b/tests/regression/pileup.rs @@ -0,0 +1,104 @@ +use super::common::{fixture, run, select_tsv_cols}; +use tempfile::NamedTempFile; + +#[test] +fn pileup_default() { + let tmp = NamedTempFile::new().unwrap(); + run(&[ + "pileup", + fixture("all.bam").to_str().unwrap(), + "-o", + tmp.path().to_str().unwrap(), + ]); + let out = std::fs::read_to_string(tmp.path()).unwrap(); + insta::assert_snapshot!(select_tsv_cols( + &out, + &[ + "#chrom", + "start", + "end", + "coverage", + "fire_coverage", + "score", + "nuc_coverage", + "msp_coverage", + ] + )); +} + +#[test] +fn pileup_m6a() { + let tmp = NamedTempFile::new().unwrap(); + run(&[ + "pileup", + fixture("all.bam").to_str().unwrap(), + "--m6a", + "-o", + tmp.path().to_str().unwrap(), + ]); + let out = std::fs::read_to_string(tmp.path()).unwrap(); + insta::assert_snapshot!(select_tsv_cols( + &out, + &[ + "#chrom", + "start", + "end", + "coverage", + "fire_coverage", + "score", + "nuc_coverage", + "msp_coverage", + "m6a_coverage", + ] + )); +} + +#[test] +fn pileup_no_msp() { + let tmp = NamedTempFile::new().unwrap(); + run(&[ + "pileup", + fixture("all.bam").to_str().unwrap(), + "--no-msp", + "-o", + tmp.path().to_str().unwrap(), + ]); + let out = std::fs::read_to_string(tmp.path()).unwrap(); + insta::assert_snapshot!(select_tsv_cols( + &out, + &[ + "#chrom", + "start", + "end", + "coverage", + "fire_coverage", + "score", + "nuc_coverage", + ] + )); +} + +#[test] +fn pileup_no_nuc() { + let tmp = NamedTempFile::new().unwrap(); + run(&[ + "pileup", + fixture("all.bam").to_str().unwrap(), + "--no-nuc", + "-o", + tmp.path().to_str().unwrap(), + ]); + let out = std::fs::read_to_string(tmp.path()).unwrap(); + insta::assert_snapshot!(select_tsv_cols( + &out, + &[ + "#chrom", + "start", + "end", + "coverage", + "fire_coverage", + "score", + "msp_coverage", + ] + )); +} diff --git a/tests/regression/qc.rs b/tests/regression/qc.rs new file mode 100644 index 00000000..6d36e7d3 --- /dev/null +++ b/tests/regression/qc.rs @@ -0,0 +1,7 @@ +use super::common::{fixture, run, select_tsv_cols}; + +#[test] +fn qc_default() { + let out = run(&["qc", fixture("all.bam").to_str().unwrap()]); + insta::assert_snapshot!(select_tsv_cols(&out, &["statistic", "value", "count"])); +} diff --git a/tests/regression/snapshots/regression__center__center_default.snap b/tests/regression/snapshots/regression__center__center_default.snap new file mode 100644 index 00000000..ca223231 --- /dev/null +++ b/tests/regression/snapshots/regression__center__center_default.snap @@ -0,0 +1,725 @@ +--- +source: tests/regression/center.rs +expression: "select_tsv_cols(&out,\n&[\"chrom\", \"centering_position\", \"strand\", \"query_name\",\n\"centered_position_type\", \"centered_start\", \"centered_end\",])" +--- +chrom centering_position strand query_name centered_position_type centered_start centered_end +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -200 -199 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -193 -192 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -174 -173 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -124 -123 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -72 -71 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -65 -64 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -59 -58 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -55 -54 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -52 -51 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -51 -50 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -46 -45 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -44 -43 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -42 -41 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -39 -38 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -29 -28 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -26 -25 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -23 -22 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -20 -19 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -15 -14 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -13 -12 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -5 -4 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a -3 -2 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 1 2 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 21 22 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 34 35 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 38 39 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 41 42 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 45 46 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 54 55 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 55 56 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 60 61 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 64 65 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 68 69 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 70 71 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 74 75 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 77 78 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 78 79 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 80 81 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 83 84 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 90 91 +chr1 41417291 - m54329U_210323_190418/153682218/ccs m6a 94 95 +chr1 41417291 - m54329U_210323_190418/153682218/ccs 5mC 50 51 +chr1 41417291 - m54329U_210323_190418/153682218/ccs 5mC 121 122 +chr1 41417291 - m54329U_210323_190418/153682218/ccs nuc -173 -72 +chr1 41417291 - m54329U_210323_190418/153682218/ccs nuc 95 207 +chr1 41417291 - m54329U_210323_190418/153682218/ccs msp -238 -173 +chr1 41417291 - m54329U_210323_190418/153682218/ccs msp -72 95 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -200 -199 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -198 -197 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -193 -192 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -180 -179 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -54 -53 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -51 -50 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -42 -41 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -37 -36 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -35 -34 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -27 -26 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -24 -23 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -21 -20 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -19 -18 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -14 -13 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -12 -11 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -5 -4 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a -3 -2 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 6 7 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 8 9 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 31 32 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 34 35 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 37 38 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 41 42 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 46 47 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 48 49 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 54 55 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 55 56 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 60 61 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 64 65 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 68 69 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 75 76 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 78 79 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 79 80 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 81 82 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 84 85 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 95 96 +chr1 41417291 - m54329U_210323_190418/69601002/ccs m6a 98 99 +chr1 41417291 - m54329U_210323_190418/69601002/ccs nuc -179 -54 +chr1 41417291 - m54329U_210323_190418/69601002/ccs nuc 99 205 +chr1 41417291 - m54329U_210323_190418/69601002/ccs msp -235 -179 +chr1 41417291 - m54329U_210323_190418/69601002/ccs msp -54 99 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -199 -198 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -192 -191 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -179 -178 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -113 -112 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -102 -101 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -100 -99 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -95 -94 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -87 -86 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -83 -82 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -81 -80 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -76 -75 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -75 -74 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -71 -70 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -64 -63 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -60 -59 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -58 -57 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -56 -55 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -54 -53 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -51 -50 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -50 -49 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -45 -44 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -42 -41 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -40 -39 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -37 -36 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -35 -34 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -27 -26 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -24 -23 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -21 -20 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -19 -18 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -14 -13 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -12 -11 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -9 -8 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -8 -7 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -7 -6 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -6 -5 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -5 -4 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a -3 -2 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 1 2 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 4 5 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 16 17 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 17 18 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 21 22 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 31 32 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 34 35 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 35 36 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 37 38 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 38 39 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 41 42 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 48 49 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 54 55 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 55 56 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 64 65 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 66 67 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 68 69 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 70 71 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 75 76 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 81 82 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 113 114 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 176 177 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 188 189 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 190 191 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 191 192 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 193 194 +chr1 41417291 - m64076_221119_202646/7670459/ccs m6a 200 201 +chr1 41417291 - m64076_221119_202646/7670459/ccs 5mC -163 -162 +chr1 41417291 - m64076_221119_202646/7670459/ccs 5mC 13 14 +chr1 41417291 - m64076_221119_202646/7670459/ccs nuc 76 176 +chr1 41417291 - m64076_221119_202646/7670459/ccs msp -262 76 +chr1 41417291 - m64076_221119_202646/7670459/ccs msp 176 268 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -192 -191 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -64 -63 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -58 -57 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -54 -53 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -51 -50 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -50 -49 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -45 -44 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -42 -41 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -40 -39 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -37 -36 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -35 -34 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -27 -26 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -24 -23 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -21 -20 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -19 -18 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -14 -13 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -12 -11 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -5 -4 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a -3 -2 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 1 2 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 34 35 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 37 38 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 41 42 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 46 47 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 48 49 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 54 55 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 55 56 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 60 61 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 64 65 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 68 69 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 70 71 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 75 76 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 78 79 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 79 80 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 81 82 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 84 85 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 86 87 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 89 90 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 193 194 +chr1 41417291 - m54329U_210323_190418/175376345/ccs m6a 200 201 +chr1 41417291 - m54329U_210323_190418/175376345/ccs nuc -322 -192 +chr1 41417291 - m54329U_210323_190418/175376345/ccs nuc -191 -64 +chr1 41417291 - m54329U_210323_190418/175376345/ccs nuc 90 193 +chr1 41417291 - m54329U_210323_190418/175376345/ccs msp -192 -191 +chr1 41417291 - m54329U_210323_190418/175376345/ccs msp -64 90 +chr1 41417291 - m54329U_210323_190418/175376345/ccs msp 193 268 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a -93 -92 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a -83 -82 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a -77 -76 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a -71 -70 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a -64 -63 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a 75 76 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a 81 82 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a 84 85 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a 91 92 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a 95 96 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a 98 99 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a 103 104 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a 115 116 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a 133 134 +chr1 41417291 - m54329U_210814_130637/51841329/ccs m6a 139 140 +chr1 41417291 - m54329U_210814_130637/51841329/ccs nuc -221 -93 +chr1 41417291 - m54329U_210814_130637/51841329/ccs nuc -63 75 +chr1 41417291 - m54329U_210814_130637/51841329/ccs nuc 140 279 +chr1 41417291 - m54329U_210814_130637/51841329/ccs msp -93 -63 +chr1 41417291 - m54329U_210814_130637/51841329/ccs msp 75 140 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -200 -199 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -198 -197 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -196 -195 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -191 -190 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -64 -63 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -58 -57 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -54 -53 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -51 -50 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -50 -49 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -45 -44 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -42 -41 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -40 -39 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -37 -36 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -35 -34 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -27 -26 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -24 -23 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -21 -20 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -19 -18 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -14 -13 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -12 -11 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -9 -8 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -7 -6 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -5 -4 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a -3 -2 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 1 2 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 4 5 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 6 7 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 7 8 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 8 9 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 9 10 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 11 12 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 17 18 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 18 19 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 22 23 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 25 26 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 27 28 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 32 33 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 35 36 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 36 37 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 38 39 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 39 40 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 42 43 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 46 47 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 47 48 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 55 56 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 56 57 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 61 62 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 65 66 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 69 70 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 76 77 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 79 80 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 80 81 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 82 83 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 85 86 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 87 88 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 90 91 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 96 97 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 99 100 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 104 105 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 106 107 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 110 111 +chr1 41417291 - m54329U_210326_192251/150735501/ccs m6a 120 121 +chr1 41417291 - m54329U_210326_192251/150735501/ccs 5mC -162 -161 +chr1 41417291 - m54329U_210326_192251/150735501/ccs 5mC 52 53 +chr1 41417291 - m54329U_210326_192251/150735501/ccs nuc -190 -64 +chr1 41417291 - m54329U_210326_192251/150735501/ccs nuc 121 206 +chr1 41417291 - m54329U_210326_192251/150735501/ccs msp -247 -190 +chr1 41417291 - m54329U_210326_192251/150735501/ccs msp -64 121 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -200 -199 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -150 -149 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -102 -101 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -100 -99 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -97 -96 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -93 -92 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -90 -89 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -87 -86 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -83 -82 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -81 -80 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -77 -76 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -76 -75 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -75 -74 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -64 -63 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -60 -59 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -58 -57 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -56 -55 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -54 -53 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -51 -50 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -50 -49 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -42 -41 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -37 -36 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -35 -34 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -27 -26 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -24 -23 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -21 -20 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -19 -18 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -14 -13 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a -12 -11 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 41 42 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 46 47 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 75 76 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 78 79 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 81 82 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 84 85 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 86 87 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 89 90 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 91 92 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 98 99 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 103 104 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 109 110 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 113 114 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 114 115 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 115 116 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 119 120 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 127 128 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 129 130 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 130 131 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 133 134 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 135 136 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 136 137 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 139 140 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 140 141 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 142 143 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 146 147 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 149 150 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 150 151 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 153 154 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 156 157 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 159 160 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 164 165 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 165 166 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 168 169 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 171 172 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 174 175 +chr1 41417291 - m64076_221119_202646/22743036/ccs m6a 181 182 +chr1 41417291 - m64076_221119_202646/22743036/ccs 5mC -163 -162 +chr1 41417291 - m64076_221119_202646/22743036/ccs nuc -211 -102 +chr1 41417291 - m64076_221119_202646/22743036/ccs nuc 182 294 +chr1 41417291 - m64076_221119_202646/22743036/ccs msp -102 182 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -198 -197 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -197 -196 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -195 -194 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -194 -193 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -187 -186 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -185 -184 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -184 -183 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -183 -182 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -175 -174 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -84 -83 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -77 -76 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -76 -75 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -59 -58 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -55 -54 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -52 -51 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -51 -50 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -45 -44 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -42 -41 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -37 -36 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -35 -34 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -27 -26 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -24 -23 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -21 -20 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -19 -18 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -14 -13 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -12 -11 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -9 -8 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -8 -7 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -6 -5 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -5 -4 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a -3 -2 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 1 2 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 4 5 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 6 7 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 7 8 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 8 9 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 10 11 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 24 25 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 26 27 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 31 32 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 34 35 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 35 36 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 37 38 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 38 39 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 41 42 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 45 46 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 46 47 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 54 55 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 55 56 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 60 61 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 64 65 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 79 80 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 81 82 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 84 85 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 89 90 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 91 92 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 95 96 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 98 99 +chr1 41417291 - m54329U_210323_190418/70059118/ccs m6a 106 107 +chr1 41417291 - m54329U_210323_190418/70059118/ccs 5mC 13 14 +chr1 41417291 - m54329U_210323_190418/70059118/ccs nuc -174 -84 +chr1 41417291 - m54329U_210323_190418/70059118/ccs nuc 107 218 +chr1 41417291 - m54329U_210323_190418/70059118/ccs msp -273 -174 +chr1 41417291 - m54329U_210323_190418/70059118/ccs msp -84 107 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -200 -199 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -192 -191 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -191 -190 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -185 -184 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -179 -178 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -64 -63 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -58 -57 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -54 -53 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -51 -50 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -45 -44 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -42 -41 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -40 -39 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -37 -36 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -35 -34 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -27 -26 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -24 -23 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -21 -20 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -19 -18 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -14 -13 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -12 -11 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -9 -8 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -6 -5 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -5 -4 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a -3 -2 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 1 2 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 4 5 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 6 7 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 7 8 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 8 9 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 10 11 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 17 18 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 21 22 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 24 25 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 26 27 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 31 32 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 34 35 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 35 36 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 37 38 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 38 39 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 41 42 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 46 47 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 49 50 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 55 56 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 56 57 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 61 62 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 65 66 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 67 68 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 69 70 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 71 72 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 76 77 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 79 80 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 80 81 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 82 83 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 85 86 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 91 92 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 100 101 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 158 159 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 176 177 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 178 179 +chr1 41417291 - m54329U_210810_004956/163120851/ccs m6a 195 196 +chr1 41417291 - m54329U_210810_004956/163120851/ccs 5mC -162 -161 +chr1 41417291 - m54329U_210810_004956/163120851/ccs 5mC 52 53 +chr1 41417291 - m54329U_210810_004956/163120851/ccs nuc -178 -64 +chr1 41417291 - m54329U_210810_004956/163120851/ccs msp -247 -178 +chr1 41417291 - m54329U_210810_004956/163120851/ccs msp -64 262 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a -104 -103 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a -94 -93 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a -92 -91 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a -85 -84 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a -82 -81 +chr11 44286466 + 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44286466 + m54329U_210813_020940/57344189/ccs m6a 96 97 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a 98 99 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a 100 101 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a 106 107 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a 117 118 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a 121 122 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a 124 125 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a 127 128 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a 128 129 +chr11 44286466 + m54329U_210813_020940/57344189/ccs m6a 131 132 +chr11 44286466 + m54329U_210813_020940/57344189/ccs 5mC -75 -74 +chr11 44286466 + m54329U_210813_020940/57344189/ccs 5mC 58 59 +chr11 44286466 + m54329U_210813_020940/57344189/ccs 5mC 105 106 +chr11 44286466 + m54329U_210813_020940/57344189/ccs 5mC 173 174 +chr11 44286466 + m54329U_210813_020940/57344189/ccs nuc -203 -104 +chr11 44286466 + 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m54329U_210323_190418/124061784/ccs m6a -141 -140 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a -121 -120 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a -37 -36 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a -34 -33 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a -30 -29 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a -23 -22 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a -21 -20 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a -14 -13 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a -2 -1 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 44 45 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 48 49 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 61 62 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 64 65 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 68 69 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 72 73 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 75 76 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 77 78 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 81 82 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 85 86 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 91 92 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 94 95 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 101 102 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 105 106 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 107 108 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 110 111 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 113 114 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 116 117 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 118 119 +chr15 74054174 + m54329U_210323_190418/124061784/ccs m6a 123 124 +chr15 74054174 + m54329U_210323_190418/124061784/ccs 5mC -173 -172 +chr15 74054174 + m54329U_210323_190418/124061784/ccs 5mC -171 -170 +chr15 74054174 + m54329U_210323_190418/124061784/ccs 5mC -91 -90 +chr15 74054174 + m54329U_210323_190418/124061784/ccs 5mC -63 -62 +chr15 74054174 + m54329U_210323_190418/124061784/ccs 5mC 120 121 +chr15 74054174 + m54329U_210323_190418/124061784/ccs 5mC 162 163 +chr15 74054174 + m54329U_210323_190418/124061784/ccs nuc -345 -182 +chr15 74054174 + m54329U_210323_190418/124061784/ccs nuc -120 -37 +chr15 74054174 + m54329U_210323_190418/124061784/ccs nuc 124 265 +chr15 74054174 + m54329U_210323_190418/124061784/ccs msp -182 -120 +chr15 74054174 + m54329U_210323_190418/124061784/ccs msp -37 124 diff --git a/tests/regression/snapshots/regression__extract__extract_all_napa.snap b/tests/regression/snapshots/regression__extract__extract_all_napa.snap new file mode 100644 index 00000000..bfe1ee8e --- /dev/null +++ b/tests/regression/snapshots/regression__extract__extract_all_napa.snap @@ -0,0 +1,159 @@ +--- +source: tests/regression/extract.rs +expression: "select_tsv_cols(&out,\n&[\"#ct\", \"st\", \"en\", \"fiber\", \"nuc_starts\", \"nuc_lengths\", \"msp_starts\",\n\"msp_lengths\", \"fire\", \"m6a\",])" +--- +#ct st en fiber nuc_starts nuc_lengths msp_starts msp_lengths fire m6a +chr19 47480179 47512478 m54329U_210814_130637/54723395/ccs 57,268,452,643,818,1024,1305,1522,1660,1847,2039,2276,2398,2583,2764,2919,3076,3270,3418,3558,3860,4238,4590,4761,4937,5123,5326,5510,5670,5861,5992,6129,6806,7087,7256,7498,7703,7921,8095,8277,8465,8634,9043,9384,9560,9750,10049,10189,10330,10571,10777,10957,11115,11300,11525,11697,11880,12091,12246,12435,12628,12859,13236,13583,13783,14139,14300,14503,14672,14859,15048,15175,15376,15630,15984,16087,16268,16464,16623,16784,16955,17141,17514,17762,17886,18057,18227,18437,18651,18904,19033,19231,19409,19620,19784,20036,20185,20363,20541,20758,20910,21132,21316,21497,21645,21870,22205,22399,22589,22775,23124,23291,23507,23719,23900,24068,24232,24465,24681,24878,25075,25264,25448,25651,25881,26228,26394,26641,26801,27025,27223,27457,27598,27723,27964,28168,28415,28623,28759,28938,29127,29697,29968,30121,30322,30515,30714,30889,31087,31311,31683,31894, 210,136,119,100,145,133,128,122,135,118,130,93,151,125,144,129,120,108,101,142,279,197,117,134,162,149,159,125,155,130,91,511,115,131,103,116,138,112,141,138,125,257,111,126,128,259,139,130,125,103,114,110,142,136,122,144,141,106,132,146,148,92,116,150,144,122,145,151,125,116,121,145,169,108,102,127,133,144,154,150,142,136,124,88,138,121,152,161,131,88,151,142,137,163,154,84,116,118,112,99,142,145,148,147,132,292,139,148,141,121,108,136,121,148,155,163,143,141,139,164,106,144,135,125,84,131,146,159,148,127,135,128,106,116,112,106,105,76,109,188,116,195,152,150,153,148,129,158,79,120,145,95, 56,267,404,571,743,963,1157,1433,1644,1795,1965,2169,2369,2549,2708,2908,3048,3196,3378,3519,3700,4139,4435,4707,4895,5099,5272,5485,5635,5825,5991,6083,6640,6921,7218,7359,7614,7841,8033,8236,8415,8590,8891,9154,9510,9688,10009,10188,10319,10455,10674,10891,11067,11257,11436,11647,11841,12021,12197,12378,12581,12776,12951,13352,13733,13927,14261,14445,14654,14797,14975,15169,15320,15545,15738,16086,16214,16401,16608,16777,16934,17097,17277,17638,17850,18024,18178,18379,18598,18782,18992,19184,19373,19546,19783,19938,20120,20301,20481,20653,20857,21052,21277,21464,21644,21777,22162,22344,22547,22730,22896,23232,23427,23628,23867,24055,24231,24375,24606,24820,25042,25181,25408,25583,25776,25965,26359,26540,26800,26949,27152,27358,27585,27704,27839,28076,28274,28520,28699,28868,29126,29243,29892,30120,30271,30475,30663,30843,31047,31166,31431,31828, 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82,91,97,100,112,117,127,131,134,140,149,156,158,160,165,285,286,290,294,301,303,308,309,312,313,316,322,326,328,335,364,489,498,503,521,525,532,536,538,543,545,550,551,556,558,570,670,673,675,684,686,690,695,696,700,707,717,722,726,729,732,734,736,740,851,862,865,875,882,888,901,904,906,908,910,916,919,927,931,935,939,941,1050,1056,1077,1081,1084,1086,1089,1091,1094,1097,1100,1103,1105,1110,1112,1123,1135,1142,1248,1251,1256,1260,1263,1267,1272,1275,1278,1285,1291,1294,1298,1300,1304,1306,1309,1312,1320,1450,1463,1466,1471,1475,1477,1479,1482,1484,1490,1495,1497,1502,1515,1625,1637,1644,1645,1652,1656,1675,1676,1692,1774,1816,1826,1829,1834,1837,1838,1840,1862,1866,1867,1869,1871,1887,1889,1981,2017,2023,2034,2037,2042,2046,2048,2052,2054,2058,2060,2063,2066,2071,2076,2078,2095,2226,2229,2233,2243,2248,2401,2409,2410,2415,2417,2468,2582,2587,2606,2608,2617,2622,2623,2629,2630,2633,2640,2677,2801,2807,2813,2817,2819,2836,2993,2997,2998,3000,3004,3030,3033,3164,3170,3174,3187,3190,3195,3200,3202,3217,3223,3225,3235,3372,3387,3391,3393,3398,3399,3549,3556,3559,3564,3577,3581,3584,3586,3592,3720,3731,3734,3736,3740,3755,3762,3864,3866,3898,3904,3906,3928,4046,4084,4109,4283,4285,4301,4305,4307,4322,4334,4467,4480,4484,4674,4677,4680,4686,4689,4691,4712,4721,4866,4868,4872,4877,4878,4881,4883,4885,4888,4890,4893,4897,4900,4915,4922,5017,5041,5045,5047,5070,5073,5082,5085,5088,5090,5091,5092,5093,5095,5096,5103,5106,5291,5436,5438,5439,5445,5446,5449,5457,5463,5466,5574,5608,5610,5611,5614,5615,5618,5620,5623,5626,5633,5637,5639,5642,5645,5775,5780,5803,5806,5982,5990,5997,6003,6005,6155,6170,6175,6177,6180,6184,6189,6191,6193,6197,6199,6387,6390,6563,6565,6567,6569,6585,6593,6750,6758,6763,6765,6768,6775,6783,6941,6948,6951,6958,6963,6972,6974,6977,6979,6984,6989,7003,7117,7119,7128,7131,7135,7138,7141,7282,7309,7320,7325,7327,7329,7331,7337,7340,7349,7495,7497,7531,7534,7642,7646,7650,7675,7678,7688,7690,7692,7703,7802,7831,7833,7844,7847,7853,7856,7861,7863,7973,7989,7991,7993,8012,8013,8016,8040,8048,8168,8184,8190,8194,8204,8217,8326,8344,8348,8352,8431,8532,8537,8554,8556,8572,9054,9369,9387,9389,9394,9402,9556,9567,9569,9571,9578,9589,9591,9595,9601,9605,9903,9907,9915,9917,9921,9926,9927,9929,9953,10084,10089,10104,10108,10113,10256,10263,10296,10298,10303,10390,10437,10447,10463,10476,10482,10488,10493,10496,10502,10639,10665,10685,10811,10814,10817,10819,10830,10854,10856,10859,11002,11008,11014,11017,11019,11022,11030,11038,11043,11187,11189,11197,11199,11201,11207,11210,11217,11220,11358,11368,11385,11393,11395,11397,11401,11404,11412,11414,11418,11421,11424,11430,11439,11455,11571,11575,11578,11582,11585,11589,11591,11593,11602,11604,11607,11608,11618,11621,11625,11627,11629,11631,11636,11645,11651,11666,11672,11786,11790,11796,11798,11800,11802,11817,11821,11830,11834,11870,11959,11962,11965,11988,11991,11993,12004,12008,12012,12016,12019,12038,12176,12180,12182,12185,12192,12195,12199,12228,12231,12234,12237,12239,12241,12243,12254,12344,12363,12370,12376,12380,12383,12394,12396,12401,12404,12542,12544,12545,12548,12552,12557,12562,12564,12567,12572,12574,12575,12581,12583,12730,12734,12740,12741,12747,12763,12764,12766,12768,12773,12775,12793,12840,12922,12933,12934,12939,12944,12946,12949,13097,13432,13440,13442,13443,13446,13449,13453,13454,13456,13464,13467,13472,13493,13645,13647,13661,13668,13675,13677,13680,13684,13806,13815,13820,13833,13835,13837,13841,13848,13999,14001,14011,14015,14017,14020,14026,14028,14030,14036,14038,14040,14072,14212,14215,14217,14222,14225,14426,14431,14441,14463,14583,14605,14606,14608,14613,14804,14807,14819,14829,14981,14988,14990,15011,15014,15191,15195,15209,15211,15212,15216,15218,15257,15352,15356,15362,15371,15374,15377,15379,15382,15385,15387,15391,15397,15409,15416,15419,15422,15576,15582,15586,15588,15590,15591,15595,15597,15601,15606,15627,15644,15650,15771,15773,15777,15780,15791,15794,15815,15828,15833,15845,15853,15856, 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129,328,511,713,923,1088,1494,1673,1892,2060,2278,2534,2725,2927,3104,3307,3479,3693,3876,4054,4244,4484,4686,4858,5050,5212,5402,5599,5822,6020,6211,6402,6547,6729,6924,7091,7260,7504,7655,7831,7995,8190,8376,8589,8745,8947,9125,9344,9494,9696,9910,10142,10284,10499,10705,10883,11048,11261,11460,11594,11796,12012,12178,12501,12659,12847,13058,13213,13382,13568,13793,13956,14162,14381,14540,14689,14936,15086,15280,15508,15706,15902,16061,16254,16493,16697,16838,17078,17248,17434,17608,17819,17966,18235,18442, 38,42,50,79,42,284,68,79,61,100,138,72,55,57,81,68,48,33,80,65,88,23,21,53,20,78,54,37,26,14,1,7,48,37,15,1,79,14,46,37,59,48,63,20,36,36,36,6,78,59,86,1,26,36,22,24,62,49,1,67,61,52,47,22,61,42,8,45,79,60,27,60,44,1,1,80,50,72,120,97,86,77,18,90,66,33,94,39,88,55,72,9,61,89,98, 0,0,0,0,0,0,0,0,0,0,245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 129,134,166,328,334,340,342,346,349,355,360,361,363,364,369,446,511,517,522,535,537,539,544,547,560,713,716,719,722,723,728,730,733,738,744,751,757,758,760,762,764,765,766,769,772,777,784,788,791,923,930,931,933,937,940,942,945,946,953,957,959,964,1088,1092,1120,1128,1133,1146,1149,1165,1168,1170,1175,1184,1246,1249,1283,1309,1318,1321,1331,1333,1358,1360,1366,1371,1494,1496,1500,1517,1518,1523,1526,1527,1529,1532,1537,1539,1561,1673,1675,1677,1682,1684,1687,1690,1694,1695,1698,1705,1707,1712,1717,1720,1722,1724,1726,1727,1729,1732,1733,1735,1739,1740,1749,1751,1847,1892,1896,1897,1899,1901,1908,1909,1911,1916,1919,1924,1931,1933,1934,1947,1952,2028,2060,2072,2076,2090,2092,2105,2111,2113,2129,2134,2135,2137,2139,2142,2143,2146,2148,2155,2157,2159,2244,2278,2281,2283,2284,2287,2310,2312,2315,2323,2326,2329,2332,2339,2341,2347,2350,2355,2358,2362,2379,2390,2403,2404,2410,2415,2534,2536,2540,2546,2561,2564,2567,2572,2575,2585,2587,2600,2603,2605,2725,2730,2732,2735,2736,2750,2751,2756,2760,2767,2771,2779,2834,2927,2932,2941,2943,2949,2962,2971,2977,2981,2983,3052,3104,3114,3119,3123,3125,3138,3139,3163,3165,3178,3183,3184,3307,3311,3314,3316,3322,3325,3328,3330,3333,3336,3337,3339,3346,3348,3359,3360,3362,3366,3374,3417,3451,3479,3493,3495,3498,3506,3510,3511,3521,3524,3526,3569,3693,3694,3701,3703,3708,3715,3717,3725,3876,3879,3892,3932,3955,4054,4072,4078,4079,4086,4087,4089,4092,4095,4099,4104,4108,4110,4114,4118,4244,4249,4261,4274,4275,4282,4286,4289,4290,4296,4301,4303,4313,4331,4484,4492,4506,4686,4688,4690,4702,4706,4858,4859,4863,4870,4881,4889,4892,4903,4910,5050,5061,5063,5069,5096,5212,5238,5258,5260,5262,5266,5271,5273,5277,5289,5402,5425,5429,5432,5435,5436,5438,5440,5446,5455,5599,5635,5822,5829,5832,5843,5847,6020,6031,6033,6211,6402,6408,6547,6549,6553,6571,6575,6576,6594,6729,6730,6732,6765,6924,6931,6934,6938,7091,7141,7260,7278,7301,7307,7311,7316,7331,7338,7504,7508,7517,7655,7661,7665,7668,7673,7680,7682,7685,7690,7693,7700,7831,7836,7838,7862,7867,7995,7998,8001,8010,8029,8038,8039,8047,8053,8190,8192,8195,8202,8212,8237,8376,8378,8384,8388,8390,8392,8394,8400,8421,8423,8438,8589,8608,8745,8757,8773,8776,8780,8947,8967,8970,8973,8982,9125,9149,9154,9160,9344,9349,9494,9497,9500,9505,9524,9529,9535,9549,9552,9558,9565,9571,9696,9698,9702,9704,9721,9743,9745,9754,9910,9915,9928,9974,9995,10142,10284,10309,10499,10501,10513,10519,10524,10529,10532,10534,10599,10705,10720,10726,10883,10906,11048,11074,11077,11078,11088,11095,11099,11105,11109,11261,11267,11271,11284,11291,11300,11309,11460,11594,11595,11598,11615,11623,11626,11628,11631,11632,11636,11637,11640,11641,11646,11647,11652,11653,11660,11796,11803,11812,11822,11830,11838,11856,12012,12015,12018,12024,12034,12039,12056,12058,12060,12063,12178,12182,12188,12195,12210,12212,12215,12221,12224,12501,12522,12659,12662,12664,12666,12669,12677,12682,12707,12710,12719,12847,12852,12854,12856,12874,12877,12884,12888,13058,13065,13213,13241,13243,13247,13252,13254,13257,13382,13389,13435,13441,13446,13454,13457,13460,13536,13568,13573,13590,13593,13595,13627,13793,13802,13819,13956,13976,13982,13985,13995,13998,14005,14010,14011,14015,14162,14174,14192,14200,14205,14381,14540,14689,14717,14718,14723,14728,14732,14735,14742,14744,14750,14756,14762,14768,14936,14938,14977,14980,14985,15032,15086,15088,15097,15102,15105,15107,15111,15114,15117,15118,15121,15124,15126,15128,15131,15134,15138,15141,15143,15153,15157,15280,15283,15292,15294,15300,15313,15315,15320,15326,15328,15331,15335,15344,15346,15347,15349,15355,15359,15361,15367,15379,15399,15508,15511,15512,15514,15520,15556,15567,15574,15579,15584,15604,15706,15717,15720,15730,15731,15737,15741,15745,15758,15765,15772,15775,15791,15902,15917,15921,15925,15927,15931,15934,15974,15978,16061,16070,16075,16078,16254,16256,16258,16265,16268,16271,16288,16290,16292,16295,16314,16329,16331,16333,16335,16337,16343,16493,16494,16496,16501,16503,16504,16507,16509,16514,16517,16524,16530,16536,16539,16540,16543,16545,16552,16556,16558,16697,16700,16705,16707,16713,16715,16722,16724,16727,16729,16838,16840,16844,16846,16847,16850,16853,16855,16858,16863,16865,16869,16871,16872,16875,16879,16890,16895,16899,16919,16921,16922,16923,16925,16929,16931,17078,17082,17091,17094,17101,17108,17109,17112,17116,17248,17253,17258,17265,17279,17288,17290,17292,17318,17320,17323,17324,17326,17328,17335,17434,17438,17444,17448,17467,17470,17488,17608,17612,17616,17620,17624,17633,17642,17645,17648,17652,17655,17677,17679,17819,17822,17827,17966,17972,17986,17992,17993,17996,17998,18001,18004,18009,18018,18026,18235,18238,18246,18248,18254,18267,18269,18271,18274,18287,18288,18294,18295,18297,18299,18305,18312,18316,18320,18322,18323,18442,18449,18453,18455,18457,18460,18461,18469,18471,18475,18479,18488,18495,18505,18507,18511,18512,18513,18533,18539,18637,18643,18645,18649,18653,18654,18656,18660,18679,18682,18684,18686,18695,18706,18710,18713,18720,18731,18735,18736,18747,18763,18769,18782,18784,18818,18837,18839,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214,385,566,764,943,1168,1328,1537,1691,1919,2083,2257,2446,2632,2733,2838,2970,3176,3325,3426,3626,3837,4018,4186,4419,4560,4755,4949,5143,5332,5493,5711,5873,6046,6292,6459,6662,6892,7110,7270,7480,7689,7902,8061,8301,8504,8709,8883,9092,9217,9441,9629,9801,9990,10316,10468,10690,10851,11111,11265,11494,11623,11831,11997,12210,12427,12575,12771,12932,13066,13240,13532,13871,14017,14232,14437,14597,14776,14957,15079,15202,15331,15498,15646,15819,17017,17163,17294,17446,17673,17831,17992,18191,18387,18546,18735,18881,19107,19313,19483,19689,19942,20143,20355,20569,20777,20940,21131,21279,21508,21710,21836,22073,22302,22475,22659,22861,23038,23255,23416,23628,23786,24007,24293,24568,24726,24940,25156,25356,25551,25750,25980,26168,26275,26369, 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9,13,15,17,22,24,27,30,31,33,39,43,164,168,171,173,174,184,193,195,200,203,208,209,212,214,220,222,323,329,347,363,368,370,380,382,387,389,401,402,404,406,407,412,415,429,475,478,481,483,494,497,502,511,516,517,518,522,525,527,534,536,541,542,544,547,552,555,576,580,585,588,685,687,690,692,696,704,707,719,721,725,727,739,743,746,897,905,913,925,938,946,1089,1091,1094,1096,1105,1110,1118,1124,1128,1130,1139,1153,1265,1276,1282,1284,1286,1292,1296,1307,1312,1313,1318,1320,1328,1471,1474,1478,1482,1485,1488,1492,1494,1497,1500,1503,1506,1509,1512,1514,1517,1521,1525,1528,1641,1667,1674,1676,1679,1681,1685,1690,1692,1705,1707,1709,1712,1714,1717,1721,1724,1731,1869,1871,1882,1886,1887,1891,1894,1895,1900,1906,1909,1920,1924,1927,2079,2083,2084,2088,2107,2244,2249,2251,2252,2257,2258,2261,2263,2264,2268,2274,2275,2282,2430,2436,2441,2444,2446,2449,2452,2454,2457,2459,2465,2482,2490,2635,2638,2641,2644,2649,2656,2657,2660,2837,2841,2844,2847,2860,2866,2868,3001,3006,3010,3019,3029,3031,3215,3218,3236,3238,3249,3350,3361,3362,3383,3385,3388,3391,3395,3402,3406,3410,3550,3556,3564,3566,3571,3572,3578,3581,3586,3593,3596,3598,3600,3603,3608,3611,3615,3619,3632,3634,3638,3642,3644,3649,3771,3776,3779,3781,3799,3802,3805,3814,3831,3942,3945,3953,3959,3966,3968,3977,3983,3999,4000,4005,4008,4010,4012,4128,4131,4148,4157,4159,4164,4165,4170,4174,4177,4180,4182,4185,4188,4192,4195,4344,4485,4487,4490,4493,4503,4506,4508,4513,4516,4524,4527,4531,4539,4549,4681,4700,4703,4705,4709,4715,4717,4721,4729,4732,4734,4738,4739,4742,4744,4746,4748,4751,4755,4901,4906,4910,4912,4915,4921,4922,4926,4929,4934,4939,4941,5089,5091,5098,5101,5109,5113,5117,5121,5123,5130,5134,5295,5297,5299,5309,5446,5448,5483,5485,5487,5495,5497,5499,5509,5515,5696,5700,5705,5710,5715,5725,5842,5857,6058,6065,6072,6078,6081,6084,6090,6095,6231,6245,6254,6258,6260,6261,6264,6266,6269,6272,6277,6281,6284,6286,6288,6292,6298,6300,6407,6418,6422,6424,6430,6434,6439,6442,6446,6449,6453,6454,6456,6458,6459,6461,6468,6473,6477,6478,6479,6481,6483,6497,6504,6517,6520,6521,6527,6531,6532,6535,6540,6543,6545,6546,6547,6550,6552,6553,6555,6557,6563,6676,6682,6691,6694,6696,6697,6703,6711,6714,6717,6719,6721,6723,6725,6726,6736,6739,6825,6838,6843,6845,6849,6852,6857,6864,6868,6875,6997,7001,7010,7015,7017,7020,7023,7025,7028,7031,7033,7038,7144,7198,7200,7202,7203,7206,7209,7212,7214,7217,7218,7219,7221,7224,7234,7244,7377,7394,7405,7411,7412,7417,7428,7446,7452,7564,7567,7569,7576,7580,7585,7589,7600,7609,7611,7623,7624,7629,7642,7771,7772,7783,7786,7800,7805,7970,7971,7973,7989,7993,8000,8015,8020,8025,8027,8084,8145,8168,8170,8186,8191,8194,8670,8699,8841,8845,8847,8860,8864,8867,8869,9017,9024,9028,9032,9034,9038,9057,9063,9068,9168,9175,9197,9203,9212,9223,9225,9233,9391,9393,9396,9412,9561,9563,9568,9589,9592,9593,9595,9597,9602,9604,9606,9614,9654,9703,9704,9723,9727,9743,9745,9751,9755,9757,9771,9775,9778,9791,9794,9891,9904,9906,9911,9915,9918,9931,9938,9949,9956,9957,9961,9963,9965,9970,9974,10266,10283,10285,10289,10293,10312,10315,10317,10322,10327,10332,10404,10417,10420,10421,10429,10435,10440,10442,10450,10455,10458,10461,10464,10474,10478,10481,10486,10490,10491,10506,10643,10644,10649,10662,10681,10811,10818,10820,10821,10822,10828,10830,10835,10837,10840,10841,10842,10844,10846,10849,10851,10853,10855,10857,10867,10979,10981,10984,10986,10996,11002,11003,11008,11010,11019,11030,11035,11043,11167,11168,11173,11176,11198,11273,11353,11371,11373,11387,11545,11548,11560,11565,11571,11572,11577,11578,11580,11583,11586,11592,11594,11601,11759,11764,11785,11790,11792,11794,11932,11936,11943,11946,11949,11951,11962,11967,11969,11972,11974,12102,12108,12110,12120,12130,12133,12136,12141,12143,12148,12156,12157,12160,12171,12185,12191,12206,12211,12299,12307,12316,12318,12323,12326,12332,12335,12336,12339,12340,12343,12347,12349,12352,12367,12370,12371,12377,12382,12386,12391,12394,12511,12552,12557,12561,12562,12564,12567,12570,12577,12583,12588,12682,12685,12690,12712,12724,12740,12747,12749,12757,12761,12764,12767,12773,12910,12917,12934,12937,12944,13066,13094,13097,13102,13115,13131,13133,13247,13258,13275,13290,13293,13414,13452,13608,13614,13629,13633,13634,13637,13639,13641,13649,13672,13676,13678,13751,13759,13765,13768,13793,13798,13801,13803,13805,13809,13812,13814,13820,13825,13827,13830,13833,13834,13835,13842,13844,13847,13858,13869,13929,13995,14015,14019,14022,14025,14027,14032,14034,14049,14175,14214,14221,14369,14379,14390,14542,14548,14549,14678,14693,14700,14710,14716,14722,14725,14728,14738,14742,14744,14747,14753,14878,14883,14896,14905,14907,14910,14913,14917,14938,15077,15090,15092,15230,15233,15236,15241,15243,15261,15389,15391,15409,15540,15563,15566,15570,15574,15576,15578,15581,15582,15585,15588,15590,15592,15597,15600,15616,15723,15727,15735,15737,15738,15739,15743,15747,15752,15766,15774,15775,15777,15781,15787,15800,15801,15803,15805,15807,15808,15812,15816,15831,15837,15841,15856,15918,15926,15928,15936,15939,15948,15958,15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+chr19 47499682 47516253 m54329U_210323_190418/100861377/ccs 142,269,474,678,852,1217,1364,1521,1687,1852,1998,2185,2369,2556,2761,2987,3142,3353,3443,3632,3821,3985,4174,4359,4543,4713,4946,5110,5340,5528,5699,5915,6080,6293,6506,6681,6869,7100,7281,7466,7610,7840,8030,8199,8381,8614,8728,8927,9213,9364,9528,9697,9852,10011,10194,10341,10533,10757,10910,11091,11261,11422,11591,11761,11942,12129,12337,12494,12648,12788,12955,13250,13399,13581,13774,14028,14160,14334,14544,14709,14883,15061,15231,15391,15753,15889,16293, 126,153,145,84,133,146,127,121,86,124,118,123,97,156,130,113,127,84,147,113,134,124,119,128,135,130,116,127,120,117,124,132,151,125,92,107,139,134,115,118,132,95,105,99,97,89,122,198,136,122,168,110,106,91,123,98,127,102,137,127,109,120,122,146,137,108,115,116,119,130,122,98,148,110,123,86,143,101,126,91,105,108,110,159,82,364,102, 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0,2,3,5,6,94,107,110,112,117,118,123,127,134,137,140,299,302,306,309,311,314,317,322,324,328,330,333,334,336,338,355,481,497,498,500,503,506,514,525,681,690,695,697,862,867,869,872,876,895,1020,1021,1023,1057,1059,1082,1229,1233,1247,1249,1252,1255,1270,1283,1285,1293,1397,1420,1430,1435,1460,1464,1629,1640,1643,1645,1664,1806,1809,1811,1830,1832,1833,1844,1872,1874,1888,2004,2006,2012,2021,2029,2034,2038,2041,2044,2046,2049,2052,2056,2059,2065,2070,2072,2273,2275,2278,2282,2445,2451,2453,2585,2606,2615,2628,2631,2632,2640,2765,2774,2776,2779,2790,2840,2860,2985,2990,3006,3008,3018,3020,3030,3033,3036,3044,3052,3054,3190,3202,3207,3215,3217,3225,3227,3230,3232,3247,3557,3566,3569,3577,3579,3589,3591,3614,3618,3702,3774,3776,3792,3798,3800,3958,3972,3977,4001,4121,4129,4147,4149,4155,4157,4161,4163,4165,4173,4184,4190,4194,4201,4345,4350,4381,4385,4391,4395,4396,4399,4404,4546,4548,4553,4560,4567,4569,4603,4608,4614,4620,4622,4627,4628,4750,4778,4780,4786,4790,4797,4800,4802,4886,4977,4981,5080,5124,5126,5131,5136,5138,5147,5150,5152,5157,5170,5176,5182,5190,5196,5200,5202,5204,5206,5223,5227,5359,5379,5391,5398,5400,5405,5408,5409,5410,5415,5417,5430,5433,5435,5475,5595,5596,5601,5609,5615,5777,5802,5978,5980,6003,6011,6119,6161,6195,6199,6200,6204,6359,6361,6382,6394,6395,6399,6495,6497,6536,6544,6552,6557,6565,6571,6576,6589,6591,6595,6730,6733,6740,6743,6745,6749,6752,6762,6776,6779,6781,6791,6918,6923,6932,6936,6938,6941,6943,6946,6953,6960,6962,6968,6972,6975,6982,6988,6991,7000,7021,7041,7139,7158,7166,7280,7295,7322,7344,7346,7347,7352,7354,7367,7455,7463,7480,7509,7510,7513,7516,7528,7530,7539,7541,7657,7660,7685,7702,7712,7717,7726,7728,7730,7732,7849,7852,7876,7893,7902,7915,8051,8064,8067,8070,8198,8218,8221,8352,8395,8401,8409,8412,8414,8420,8567,8569,8578,8582,8589,8591,8600,8601,8612,8614,8618,8634,8638,8645,8648,8650,8735,8764,8767,8771,8776,8778,8780,8786,8789,8793,8798,8806,8920,8951,8966,8969,8970,8979,8984,8990,9103,9132,9151,9154,9156,9166,9174,9177,9182,9194,9331,9351,9354,9355,9362,9367,9369,9378,9380,9384,9390,9524,9535,9567,9571,9574,9579,9730,9736,9742,9744,9751,9754,9755,9757,9761,9762,9765,9767,9770,9774,9779,9946,9949,9952,9960,9963,9968,9970,9974,9976,9979,10299,10301,10303,10305,10306,10322,10327,10345,10483,10486,10489,10490,10492,10508,10514,10520,10523,10526,10528,10540,10545,10548,10551,10556,10623,10663,10677,10687,10694,10710,10714,10716,10718,10735,10736,10739,10910,10946,10953,10956,10957,10962,11085,11326,11328,11352,11371,11376,11379,11380,11397,11400,11402,11405,11410,11417,11418,11420,11421,11423,11424,11430,11441,11457,11471,11560,11746,11749,11754,11838,11885,11888,11890,11892,11895,11897,11904,11908,11910,11912,11914,11916,12192,12207,12210,12211,12214,12217,12219,12221,12231,12236,12239,12241,12243,12252,12255,12257,12258,12260,12271,12273,12275,12279,12291,12296,12372,12404,12519,12521,12529,12533,12535,12543,12547,12550,12552,12557,12561,12564,12565,12567,12572,12574,12576,12583,12585,12589,12592,12709,12718,12742,12842,12854,12859,12870,12872,12874,12877,12879,12886,12888,12893,12896,12897,12900,12901,12903,12904,12906,12912,12914,12920,12922,12926,12929,12931,12941,13081,13085,13097,13100,13104,13105,13107,13109,13117,13236,13238,13243,13247,13251,13253,13255,13258,13260,13268,13272,13273,13292,13294,13297,13305,13307,13407,13409,13430,13440,13456,13464,13590,13607,13609,13616,13624,13628,13630,13634,13638,13639,13641,13645,13651,13664,13665,13667,13669,13671,13672,13682,13691,13698,13705,13716,13720,13721,13728,13782,13790,13800,13803,13812,13822,13824,13829,13831,13838,13839,13840,13846,13856,13859,13863,13864,13869,13871,13880,13881,13888,13891,13893,13895,13897,13902,13907,13909,13911,13912,13915,13920,13927,13933,13935,13938,13939,13943,13944,13945,13985,13988,13991,13992,13995,14005,14006,14011,14014,14024,14050,14066,14068,14070,14078,14080,14083,14108,14117,14126,14130,14132,14134,14137,14142,14145,14166,14169,14178,14182,14187,14191,14193,14198,14200,14206,14207,14208,14209,14212,14213,14218,14219,14221,14269,14271,14276,14279,14281,14283,14285,14287,14292,14308,14315,14458,14585,14595,14599,14605,14609,14621,14623,14702,14745,14754,14765,14774,14775,14784,14795,14944,14947,14952,14955,14957,14960,14962,14965,14988,14989,14998,15001,15003,15011,15186,15193,15201,15203,15205,15359,15360,15365,15374,15376,15515,15518,15521,15524,15526,15530,15531,15534,15538,15541,15687,15698,15711,15721,15727,15875,15878,15883,15899,15901,15909,15913,15917,15918,15921,15927,15929,15936,16062,16068,16070,16072,16074,16076,16085,16107,16213,16227,16229,16235,16237,16315,16531,16532,16549,16552,16561,16835,16841,16845,16852,16855,16867,16874,16877,16879,16880,16886,16891,16893,16898,16901,16902,16906,16909,16911,16912,16916,16917,16923,16924,16926,16928,16934,16935,16937,16940,16941,16945,16947,16948,16952,16955,16958,16961,16962,16964,16967,16970,16975,16977,16986,16989,16991,16993,16996,16999,17005,17007,17011,17015,17020,17038,17039,17041,17043,17045,17049,17052,1705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+chr19 47501400 47513749 m54329U_210323_190418/100534861/ccs 205,406,596,784,942,1127,1347,1508,1699,1861,2061,2233,2431,2638,2824,2993,3178,3345,3520,3710,3936,4097,4327,4517,4671,4877,5038,5264,5612,5825,6005,6204,6391,6583,6752,6937,7150,7331,7505,7677,7886,8043,8264,8399,8595,8743,9000,9174,9414,9780,9974,10182,10346,10578,10771,10910,11105,11367,11551,11753,11920, 132,166,150,100,159,139,149,169,137,183,142,178,166,149,137,135,152,152,184,152,152,150,126,120,174,132,163,315,167,136,147,154,149,150,159,166,141,140,159,173,153,162,111,159,135,186,138,162,328,113,146,150,179,122,122,139,121,137,143,117,136, 187,337,572,746,884,1101,1266,1496,1677,1836,2044,2203,2411,2597,2787,2961,3128,3330,3497,3704,3862,4088,4247,4453,4637,4845,5009,5201,5579,5779,5961,6152,6358,6540,6733,6911,7103,7291,7471,7664,7850,8039,8205,8375,8558,8730,8929,9138,9336,9742,9893,10120,10332,10525,10700,10893,11049,11226,11504,11694,11870,12056, 18,69,24,38,58,26,81,12,22,25,17,30,20,41,37,32,50,15,23,6,74,9,80,64,34,32,29,63,33,46,44,52,33,43,19,26,47,40,34,13,36,4,59,24,37,13,71,36,78,38,81,62,14,53,71,17,56,141,47,59,50,38, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,243,0,0,0,0, 7,10,15,17,20,22,187,188,191,193,196,198,203,204,231,337,339,342,345,348,354,359,362,368,371,376,378,384,385,387,392,393,396,397,399,402,405,572,576,578,579,592,595,746,749,752,755,761,768,774,777,783,884,900,905,906,921,923,934,936,941,1101,1107,1113,1114,1116,1126,1266,1268,1272,1273,1275,1297,1304,1306,1307,1309,1311,1313,1317,1318,1320,1324,1326,1329,1330,1336,1346,1496,1497,1499,1504,1507,1677,1691,1698,1836,1839,1843,1860,2044,2045,2047,2058,2060,2203,2210,2222,2225,2232,2411,2424,2426,2430,2597,2600,2602,2605,2613,2619,2630,2631,2637,2787,2790,2792,2799,2823,2961,2968,2982,2990,2992,3128,3131,3134,3140,3143,3145,3149,3153,3155,3163,3168,3170,3171,3177,3330,3332,3344,3497,3500,3506,3513,3519,3704,3707,3709,3862,3875,3884,3885,3888,3893,3894,3898,3903,3905,3911,3913,3935,4088,4090,4092,4096,4247,4251,4254,4258,4263,4264,4273,4309,4322,4325,4326,4453,4463,4465,4468,4470,4474,4481,4487,4489,4492,4493,4501,4508,4516,4637,4644,4646,4651,4663,4670,4845,4851,4859,4862,4876,5009,5010,5013,5016,5019,5021,5026,5028,5031,5033,5037,5201,5203,5218,5219,5221,5224,5226,5235,5263,5579,5580,5582,5587,5591,5594,5608,5611,5779,5796,5798,5824,5961,5967,5973,5978,5980,5982,5986,6001,6004,6152,6155,6156,6160,6162,6166,6168,6179,6180,6183,6186,6188,6190,6192,6195,6203,6309,6358,6363,6366,6367,6370,6375,6380,6383,6390,6470,6540,6544,6547,6549,6552,6553,6567,6578,6581,6582,6677,6733,6736,6739,6751,6911,6913,6916,6917,6922,6923,6927,6933,6936,7103,7109,7116,7119,7123,7131,7133,7136,7147,7149,7291,7298,7312,7316,7319,7321,7330,7471,7477,7483,7485,7492,7504,7664,7666,7670,7672,7674,7676,7850,7854,7859,7865,7871,7873,7882,7885,8009,8039,8042,8072,8151,8205,8215,8217,8228,8231,8232,8237,8241,8259,8263,8375,8380,8396,8398,8558,8571,8573,8578,8582,8585,8594,8730,8733,8737,8742,8929,8943,8947,8965,8969,8971,8984,8992,8999,9138,9141,9167,9171,9173,9336,9339,9341,9350,9354,9357,9360,9361,9364,9366,9368,9372,9377,9379,9383,9384,9390,9392,9413,9742,9744,9752,9761,9779,9893,9899,9921,9923,9926,9933,9937,9941,9943,9945,9946,9949,9954,9970,9973,10120,10123,10125,10129,10131,10133,10136,10139,10146,10148,10149,10152,10153,10160,10165,10178,10181,10306,10332,10339,10345,10525,10528,10533,10536,10537,10543,10547,10553,10556,10577,10700,10712,10715,10719,10723,10725,10727,10730,10735,10737,10738,10740,10742,10743,10745,10746,10749,10756,10760,10768,10770,10893,10895,10900,10906,10909,11049,11054,11055,11069,11080,11085,11086,11092,11101,11104,11226,11242,11258,11260,11262,11264,11266,11268,11272,11274,11276,11278,11281,11285,11289,11309,11314,11319,11322,11324,11327,11328,11330,11338,11350,11353,11359,11360,11366,11504,11506,11508,11510,11512,11513,11517,11523,11529,11532,11544,11545,11547,11550,11694,11697,11701,11704,11707,11709,11711,11712,11716,11719,11726,11728,11731,11752,11870,11884,11889,11891,11896,11919,12056,12071,12091,12094, +chr19 47501413 47515667 m54329U_210810_004956/24643281/ccs 191,388,582,790,947,1175,1351,1550,1754,1906,2083,2282,2477,2691,2872,3167,3366,3580,3795,3980,4159,4344,4550,4793,4979,5169,5357,5560,5770,5932,6156,6378,6551,6768,6979,7156,7356,7558,7766,8111,8333,8496,8691,8874,9090,9291,9494,9679,9916,10063,10259,10467,10654,10846,10980,11146,11423,11642,11758,11966,12161,12357,12607,12777,13273,13431,14203,14349,14622,14769,14973,15146,15360,15571,15827,16123,16323,16503,16700,16908,17229,17379,17552,17695,17873,18234,18472,18859,19020,19233,19336,19557,19717,19920,20069,20308,20456,20679,21086,21488,21608,21783,22081,22318,22483,22643,22824,22986,23377,23498,23680, 119,145,111,115,140,119,136,149,132,167,161,151,143,136,278,190,163,143,141,159,142,162,150,137,150,166,137,155,145,173,146,139,153,155,121,134,119,125,281,145,162,141,108,154,148,136,125,147,146,153,115,118,139,133,149,164,140,88,142,136,155,104,140,463,113,111,102,173,76,129,144,121,101,147,262,161,150,147,117,130,128,172,87,119,132,137,125,75,93,76,138,101,135,148,162,139,172,192,285,113,143,148,210,125,138,127,155,88,75,181,318, 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+chr19 47501574 47511800 m84039_230404_003541_s3/123732821/ccs 172,356,573,747,1084,1254,1434,1662,1849,2011,2195,2417,2818,3015,3233,3422,3632,4024,4194,4375,4536,4688,4847,5047,5209,5412,5747,5886,6037,6262,6438,6980,7169,7327,7459,7643,7890,8139,8334,8490,8635,8838,9055,9234,9430,9774,9916, 143,173,150,287,116,153,136,119,144,175,131,400,158,170,159,149,128,133,180,88,108,142,162,149,153,245,138,145,128,120,446,132,136,131,162,246,171,131,97,138,155,121,140,162,291,91,140, 135,315,529,723,1034,1200,1407,1570,1781,1993,2186,2326,2817,2976,3185,3392,3571,3760,4157,4374,4463,4644,4830,5009,5196,5362,5657,5885,6031,6165,6382,6884,7112,7305,7458,7621,7889,8061,8270,8431,8628,8790,8959,9195,9396,9721,9865,10056, 37,41,44,24,50,54,27,92,68,18,9,91,1,39,48,30,61,264,37,1,73,44,17,38,13,50,90,1,6,97,56,96,57,22,1,22,1,78,64,59,7,48,96,39,34,53,51,3, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 1,2,4,5,6,135,139,141,144,154,161,163,165,168,171,315,323,344,355,462,529,538,547,551,554,557,566,572,723,728,734,743,746,1034,1049,1051,1055,1057,1081,1083,1200,1214,1219,1221,1224,1228,1231,1235,1236,1239,1247,1253,1407,1409,1433,1570,1573,1581,1584,1587,1594,1596,1608,1636,1638,1653,1661,1781,1802,1805,1808,1810,1813,1820,1823,1829,1834,1836,1842,1848,1993,2006,2008,2010,2135,2186,2194,2326,2329,2332,2334,2344,2346,2350,2358,2361,2363,2367,2416,2817,2976,2980,2982,2990,2992,2995,2997,3009,3012,3014,3082,3185,3206,3208,3211,3214,3228,3232,3317,3392,3406,3412,3421,3571,3592,3594,3596,3600,3603,3629,3631,3760,3773,3775,3784,3787,3789,3792,3800,3801,3815,3818,3827,3845,3875,3895,3898,3910,3913,3915,3917,3921,3927,3929,3931,3939,3945,3947,3949,3950,3954,3956,3959,3960,3967,3994,4023,4157,4161,4162,4165,4170,4193,4374,4463,4470,4475,4481,4484,4487,4489,4496,4503,4516,4535,4644,4649,4652,4657,4660,4665,4670,4676,4684,4687,4830,4834,4835,4838,4844,4846,5009,5020,5026,5028,5035,5036,5046,5196,5208,5241,5362,5365,5375,5376,5377,5382,5385,5398,5404,5409,5411,5657,5684,5690,5695,5705,5713,5718,5722,5746,5777,5885,6031,6032,6036,6165,6169,6173,6177,6179,6184,6196,6201,6204,6206,6209,6211,6216,6222,6225,6239,6244,6251,6257,6261,6382,6383,6388,6394,6395,6399,6402,6433,6437,6884,6893,6924,6932,6937,6940,6942,6947,6952,6954,6957,6961,6963,6971,6975,6977,6979,7028,7112,7134,7136,7143,7152,7165,7168,7305,7314,7326,7416,7458,7621,7642,7889,8061,8075,8106,8108,8110,8113,8118,8123,8129,8138,8270,8276,8281,8309,8333,8431,8454,8462,8481,8489,8628,8634,8790,8792,8803,8805,8808,8811,8817,8823,8825,8830,8833,8837,8959,8977,8987,8991,8996,9011,9014,9015,9054,9114,9195,9199,9203,9204,9209,9210,9212,9215,9218,9222,9224,9226,9228,9231,9233,9396,9407,9409,9421,9422,9426,9429,9721,9726,9729,9734,9736,9745,9749,9773,9865,9880,9883,9915,10056,10058,10205,10215, +chr19 47501949 47517076 m64076_210328_012155/98043755/ccs 127,287,456,879,1175,1343,1558,1733,1883,2190,2451,2644,2817,2988,3271,3478,3659,3862,4047,4273,4442,4605,4807,5001,5159,5375,5553,5770,5932,6130,6292,6501,6683,6873,7068,7234,7543,7749,7935,8101,8307,8465,8645,8814,8995,9173,9374,9562,9733,9914,10115,10469,10637,10932,11120,11292,11494,11695,11884,12191,12347,12499,12674,12905,13706,13881,14033,14222,14436,14578,14802,14978, 143,162,123,252,167,150,130,147,287,115,104,103,127,110,121,81,130,119,133,104,128,148,118,124,123,116,108,113,124,141,144,116,148,148,120,278,147,100,119,141,124,147,114,115,102,131,120,100,134,119,112,117,268,117,116,126,107,132,306,136,151,123,97,108,116,123,148,136,113,174,110,118, 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554,14561,14563,14565,14566,14681,14702,14706,14707,14714,14720,14723,14733,14735,14744,14749,14780,14791,14799,14803,14824,14868,15017,15023,15025,15030,15040,15042,15045,15047,15050,15060,15062,15063,15065,15157,15201,15327,15337,15339,15341,15342,15357,15358,15363,15375,15383,15385,15388,15392,15395,15396,15398,15400,15403,15404,15409,15410,15413,15415,15421,15425,15432,15435,15438,15454,15496,15561,15564,15568,15569,15572,15575,15576,15578,15579,15580,15583,15592,15593,15595,15599,15607,15612,15613,15615,15619,15622,15630,15632,15637,15639,15641,15756,15760,15763,15767,15771,15774,15775,15776,15778,15782,15794,15801,15803,15813,15814,15817,15823,15826,15829,15850,15854,15856,15966,15979,15982,16100,16104,16106,16122,16124,16128,16130,16132,16137,16139,16145,16151,16152,16156,16158,16163,16166,16167,16171,16174,16177,16188,16189,16191,16193,16195,16196,16199,16202,16203,16210,16213,16223,16240,16351,16354,16356,16364,16365,16367,16370,16373,16379,16381,16389,16394,16396,16424,16430,16432,16442,16577,16581,16583,16585,16589,16591,16593,16599,16603,16606,16608,16611,16613,16617,16620,16625,16628,16630,16761,16770,16774,16777,16779,16782,16785,16788,16790,16793,16798,16801,16811,16815,16954,16962,16966,16973,16978,16998,17001,17002,17117,17122,17129,17131,17135,17137,17143,17149,17154,17165,17279,17281,17282,17283, +chr19 47502157 47518509 m84039_230404_003541_s3/211359295/ccs 58,311,429,770,965,1140,1343,1530,1729,1889,2098,2292,2463,2645,2893,3063,3269,3380,3522,3665,3806,3984,4112,4194,4405,4508,4612,4753,4935,5107,5300,5500,5690,5951,6102,6314,6457,6662,6822,7030,7217,7395,7586,7778,7948,8147,8333,8552,8722,8938,9144,9349,9539,9700,9804,9913,10125,10247,10455,10673,10854,11015,11187,11382,11560,11767,11922,12101,12319,12523,12654,13495,13645,14053,14265,14440,14598,14734,14862,15041,15251,15654,15786, 195,92,327,164,162,193,145,144,141,208,190,170,181,159,169,172,110,141,140,115,169,127,78,153,102,100,140,156,147,169,81,150,145,98,167,123,163,156,204,186,165,153,133,155,154,161,197,158,138,141,148,132,147,103,80,117,116,192,192,131,138,131,145,161,133,120,148,154,106,123,143,149,314,153,149,157,135,127,178,207,383,131,224, 253,403,756,934,1127,1333,1488,1674,1870,2097,2288,2462,2644,2804,3062,3235,3379,3521,3662,3780,3975,4111,4190,4347,4507,4608,4752,4909,5082,5276,5381,5650,5835,6049,6269,6437,6620,6818,7026,7216,7382,7548,7719,7933,8102,8308,8530,8710,8860,9079,9292,9481,9686,9803,9884,10030,10241,10439,10647,10804,10992,11146,11332,11543,11693,11887,12070,12255,12425,12646,12797,13644,13959,14206,14414,14597,14733,14861,15040,15248,15634,15785, 58,26,14,31,13,10,42,55,19,1,4,1,1,89,1,34,1,1,3,26,9,1,4,58,1,4,1,26,25,24,119,40,116,53,45,20,42,4,4,1,13,38,59,15,45,25,22,12,78,65,57,58,14,1,29,95,6,16,26,50,23,41,50,17,74,35,31,64,98,8,698,1,94,59,26,1,1,1,1,3,20,1, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,251,0,0,0,0,0,0,0,0,0,0,0, 0,1,3,4,33,43,57,253,301,310,403,406,414,423,428,756,769,934,937,944,954,964,1127,1129,1139,1333,1342,1488,1501,1522,1523,1529,1674,1678,1682,1693,1703,1705,1719,1725,1728,1870,1884,1885,1888,2097,2288,2290,2291,2462,2644,2804,2812,2814,2818,2824,2827,2832,2844,2848,2851,2853,2856,2858,2875,2879,2883,2888,2892,3015,3062,3235,3239,3244,3268,3379,3466,3521,3662,3664,3780,3785,3804,3805,3863,3975,3979,3983,4071,4111,4190,4191,4193,4241,4347,4374,4379,4381,4394,4400,4404,4431,4507,4608,4611,4752,4909,4914,4915,4919,4921,4930,4934,5082,5088,5091,5099,5101,5104,5106,5206,5276,5277,5284,5286,5290,5293,5296,5299,5381,5383,5434,5445,5447,5480,5488,5499,5617,5650,5662,5668,5670,5672,5674,5686,5687,5689,5835,5837,5838,5841,5845,5849,5856,5861,5864,5881,5894,5898,5899,5908,5910,5911,5913,5918,5921,5923,5927,5930,5932,5950,6049,6072,6076,6078,6096,6101,6269,6274,6310,6313,6437,6440,6445,6456,6620,6637,6639,6641,6646,6654,6658,6661,6818,6821,7026,7029,7216,7382,7394,7548,7568,7584,7585,7719,7723,7745,7758,7776,7777,7901,7933,7947,8102,8132,8135,8145,8146,8194,8247,8308,8322,8327,8330,8332,8530,8551,8710,8713,8716,8721,8764,8822,8860,8862,8866,8867,8872,8873,8877,8884,8891,8893,8895,8899,8917,8937,9079,9086,9088,9091,9124,9127,9130,9143,9255,9292,9323,9324,9348,9481,9491,9502,9512,9514,9520,9538,9686,9696,9699,9710,9772,9803,9884,9886,9890,9892,9912,9997,10030,10035,10055,10057,10058,10061,10073,10075,10078,10080,10082,10086,10089,10097,10102,10104,10107,10122,10124,10241,10246,10439,10454,10647,10652,10660,10672,10804,10807,10816,10820,10822,10825,10828,10830,10832,10837,10840,10846,10848,10851,10853,10992,11003,11005,11006,11009,11012,11014,11119,11146,11147,11160,11164,11174,11186,11332,11336,11338,11341,11344,11345,11350,11352,11357,11381,11468,11543,11544,11546,11548,11550,11552,11557,11559,11693,11695,11697,11699,11701,11703,11717,11721,11723,11724,11726,11729,11731,11735,11748,11757,11759,11763,11766,11887,11892,11906,11908,11910,11921,12070,12074,12078,12080,12088,12094,12096,12100,12255,12266,12268,12274,12278,12279,12281,12283,12289,12291,12299,12318,12425,12427,12429,12432,12434,12445,12446,12463,12465,12467,12470,12478,12480,12492,12496,12507,12511,12515,12520,12522,12603,12646,12653,12763,12797,12803,12807,12812,12814,12816,12837,12838,12840,12842,12844,12845,12849,12853,12855,12864,12871,12874,12878,12893,12927,12930,12937,12940,12955,12963,12965,12973,12976,12995,12997,13002,13004,13013,13019,13021,13022,13024,13026,13029,13032,13036,13037,13042,13044,13053,13054,13061,13064,13066,13068,13070,13075,13080,13082,13084,13085,13088,13093,13097,13100,13102,13106,13108,13111,13118,13122,13125,13148,13152,13154,13158,13161,13164,13165,13168,13171,13174,13177,13184,13187,13197,13203,13223,13240,13241,13249,13251,13253,13258,13260,13265,13267,13269,13273,13278,13280,13292,13305,13307,13309,13310,13312,13317,13320,13326,13341,13344,13346,13355,13357,13360,13362,13366,13367,13368,13373,13374,13375,13377,13381,13383,13384,13387,13389,13396,13399,13431,13444,13446,13451,13453,13454,13456,13458,13460,13462,13475,13478,13480,13483,13484,13486,13492,13494,13552,13582,13644,13959,13963,13964,13966,14001,14003,14006,14009,14012,14014,14033,14042,14044,14052,14206,14208,14214,14217,14221,14222,14239,14264,14382,14414,14417,14419,14430,14439,14597,14629,14689,14698,14733,14861,15040,15248,15250,15634,15645,15649,15653,15785,16010,16026,16029,16031,16048,16051,16053,16054,16060,16061,16065,16067,16072,16075,16076,16080,16083,16085,16086,16090,16091,16096,16097,16099,16101,16103,16106,16108,16110,16113,16114,16115,16120,16121,16125,16128,16131,16134,16135,16137,16140,16143,16148,16150,16152,16154,16157,16162,16164,16166,16169,16178,16180,16184,16187,16188,16193,16195,16196,16204,16207,16211,16212,16214,16216,16218,16222,16225,16226,16228,16230,16231,16238,16241,16242,16244,16246,16250,16260,16261,16262,16264,16278,16326,16327,16328,16329,16332, +chr19 47502336 47514147 m54329U_210323_190418/43647472/ccs 122,341,523,948,1689,2239,2378,2596,2783,2966,3159,3303,3492,3654,3826,4178,4302,4498,4657,4827,5019,5185,5397,5587,5743,5895,6075,6267,6443,6604,6739,7077,7235,7364,7551,7701,7903,8093,8287,8465,8663,8842,9044,9234,9390,10169,10549,10680,10844,11000,11185,11343, 142,114,93,85,86,100,133,123,136,102,100,120,96,115,115,123,140,119,113,123,84,102,95,87,108,130,118,122,133,128,181,127,123,135,120,138,142,141,148,162,129,109,103,96,88,255,80,131,106,149,121,316, 84,264,455,616,1033,1775,2339,2511,2719,2919,3068,3259,3423,3588,3769,3941,4301,4442,4617,4770,4950,5103,5287,5492,5674,5851,6025,6193,6389,6576,6732,6920,7204,7358,7499,7671,7839,8045,8234,8435,8627,8792,8951,9147,9330,9478,10424,10629,10811,10950,11149,11306,11659, 38,77,68,332,656,464,39,85,64,47,91,44,69,66,57,237,1,56,40,57,69,82,110,95,69,44,50,74,54,28,7,157,31,6,52,30,64,48,53,30,36,50,93,87,60,691,125,51,33,50,36,37,90, 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17,1,4,45,32,63,35,1,33,47,5,85,46,35,69,30,49,32,61,57,58,38,85,71,47,67,36,51,22,52,65,44,83,1,47,42,31,35,77,55,1,1,45,55,49,24,65,52,1,32,1,103,48,57,37,59,1,132,48,69,186, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,246, 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+chr19 47502578 47527331 m84008_230107_003043_s1/93585759/ccs 207,355,578,779,1020,1185,1381,1557,1750,1895,2091,2281,2715,2860,3036,3241,3384,3590,3754,3985,4196,4396,4583,4762,4952,5146,5351,5520,5702,5889,6111,6316,6479,6606,6938,7099,7258,7475,7688,7869,8061,8231,8470,8629,8849,9072,9243,9456,9705,9896,10065,10377,10630,10831,10994,11172,11324,11470,11661,11824,11967,12114,12255,12469,13025,13258,13401,13601,13760,13906,14115,14296,14454,14629,14777,14988,15307,15557,15707,16160,16299,16489,16687,16942,17100,17248,17418,17736,17963,18110,18288,18463,18645,18835,19098,19261,19433,19619,19841,20029,20216,20358,20526,20871,21079,21278,21439,21627,21944,22111,22521,22694,22877,23071,23262,23492,23805,23906,24089,24338, 115,147,127,121,98,157,110,166,142,195,187,355,127,153,178,139,158,163,178,175,166,164,148,137,126,153,152,131,186,207,160,111,126,273,150,155,172,148,110,127,124,122,136,157,181,135,158,248,128,99,158,190,140,106,155,135,126,130,125,131,114,133,131,116,232,131,199,81,124,155,128,157,141,139,116,318,107,146,335,124,145,135,154,122,118,169,315,165,146,155,106,143,123,126,81,135,154,161,187,147,141,140,284,167,198,127,162,304,144,329,156,165,173,137,131,312,100,119,111,124, 179,322,502,705,900,1118,1342,1491,1723,1892,2090,2278,2636,2842,3013,3214,3380,3542,3753,3932,4160,4362,4560,4731,4899,5078,5299,5503,5651,5888,6096,6271,6427,6605,6879,7088,7254,7430,7623,7798,7996,8185,8353,8606,8786,9030,9207,9401,9704,9833,9995,10223,10567,10770,10937,11149,11307,11450,11600,11786,11955,12081,12247,12386,12585,13257,13389,13600,13682,13884,14061,14243,14453,14595,14768,14893,15306,15414,15703,16042,16284,16444,16624,16841,17064,17218,17417,17733,17901,18109,18265,18394,18606,18768,18961,19179,19396,19587,19780,20028,20176,20357,20498,20810,21038,21277,21405,21601,21931,22088,22440,22677,22859,23050,23208,23393,23804,23905,24025,24200,24462, 28,33,76,74,120,67,39,66,27,3,1,3,79,18,23,27,4,48,1,53,36,34,23,31,53,68,52,17,51,1,15,45,52,1,59,11,4,45,65,71,65,46,117,23,63,42,36,55,1,63,70,154,63,61,57,23,17,20,61,38,12,33,8,83,440,1,12,1,78,22,54,53,1,34,9,95,1,143,4,118,15,45,63,101,36,30,1,3,62,1,23,69,39,67,137,82,37,32,61,1,40,1,28,61,41,1,34,26,13,23,81,17,18,21,54,99,1,1,64,138,73, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,244,0,0,0,0,0,0,0,0,0,0,0,0,249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 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2,4,6,26,57,65,77,234,237,258,265,270,273,276,283,286,290,292,354,412,422,429,432,438,451,466,473,606,614,616,620,624,632,772,776,778,782,789,794,796,801,819,820,951,958,963,966,969,974,977,980,982,985,989,995,997,1149,1152,1159,1165,1169,1173,1175,1181,1183,1324,1330,1339,1343,1345,1353,1358,1360,1372,1375,1687,1693,1696,1700,1701,1702,1704,1706,1712,1881,1891,1894,1899,1903,1907,2044,2047,2075,2207,2214,2222,2224,2228,2231,2243,2249,2251,2399,2414,2416,2420,2422,2426,2438,2441,2446,2453,2500,2597,2612,2614,2618,2756,2770,2908,2911,2918,2925,2926,2928,2930,2934,2937,2939,2944,2956,2964,2965,2969,3109,3133,3142,3144,3235,3303,3309,3314,3320,3323,3329,3331,3342,3350,3381,3481,3562,3602,3643,3651,3668,3673,3675,3680,3702,3829,3835,3838,3840,3845,3851,3855,3859,3864,3869,3871,3876,3880,3894,4008,4010,4018,4020,4022,4038,4041,4042,4045,4047,4049,4051,4054,4056,4064,4070,4074,4077,4083,4085,4090,4092,4226,4232,4234,4236,4240,4243,4246,4249,4252,4257,4261,4264,4273,4395,4397,4400,4404,4407,4411,4415,4424,4426,4429,4476,4608,4609,4612,4618,4624,4781,4784,4786,4787,4790,4794,4798,4805,4810,4813,4973,4981,4983,4998,5002,5004,5007,5159,5166,5181,5291,5298,5308,5313,5315,5318,5322,5331,5338,5340,5449,5466,5471,5473,5474,5479,5481,5485,5487,5502,5504,5508,5640,5647,5761,5787,5795,5801,5804,5807,5809,5811,5812,5819,5826,5829,5833,5838,5839,5841,5843,5844,5847,5849,5853,5855,5857,5859,6016,6029,6040,6041,6052,6054,6056,6065,6068,6205,6215,6220,6221,6223,6227,6235,6239,6241,6378,6379,6405,6409,6412,6413,6422,6424,6427,6428,6435,6578,6588,6596,6618,6624,6780,6799,6810,6822,6849,6976,6992,6995,7000,7162,7165,7168,7171,7174,7180,7183,7185,7190,7191,7193,7197,7201,7204,7213,7215,7217,7219,7221,7226,7236,7247,7374,7404,7406,7411,7414,7418,7434,7563,7584,7586,7588,7591,7593,7601,7604,7606,7745,7769,7777,7818,7922,7924,7932,7935,7937,7938,7941,7943,7950,7954,7958,7959,7961,7966,8122,8128,8133,8135,8140,8148,8149,8152,8156,8295,8308,8310,8312,8318,8324,8325,8328,8493,8503,8518,8666,8668,8671,8674,8677,8680,8689,8707,8712,8715,8716,8722,8726,8732,8735,8862,8868,8879,8883,8886,8888,8891,8894,8898,8902,8904,8906,8909,8914,8917,8919,8922,8924,8928,8935,9054,9057,9061,9072,9074,9079,9082,9085,9088,9093,9094,9098,9106,9498,9501,9503,9506,9507,9509,9517,9520,9521,9522,9524,9527,9529,9532,9537,9538,9539,9544,9545,9547,9548,9551,9553,9554,9556,9557,9574,9577,9581,9598,9749,9755,9758,9762,9767,9771,9773,9776,9783,9788,9791,9793,9795,9797,9799,9802,9804,9806,9948,9950,9954,9956,9957,9960,9965,9972,9973,9975,9979,9981,9982,9985,9988,9989,10000,10009,10012,10015,10022,10024,10075,10161,10163,10176,10184,10308,10321,10466,10468,10471,10481,10488,10494,10501,10503,10519,10753,10763,10771,10782,10788,10809,10833,10933,11081,11083,11107,11109,11112,11115,11137,11244,11252,11266,11271,11285,11291,11295,11302,11308,11320,11327,11554,11567,11572,11579,11581,11583,11588,11591,11600,11605,11607,11614,11615,11617,11619,11623,11624,11625,11627,11632,11634,11637,11639,11640,11643,11645,11649,11651,11666,11688,11768,11778,11791,11792,11794,11796,11798,11799,11807,11818,11822,11825,11828,11832,11843,11847,11881,11884,11891,11894,11896,11909,11917,11919,11927,11930,11939,11949,11951,11953,11956,11958,11965,11966,11967,11976,11983,12007,12008,12015,12018,12020,12022,12024,12028,12033,12035,12037,12038,12041,12043,12046,12050,12053,12055,12059,12061,12064,12065,12069,12070,12071,12075,12077,12078,12089,12101,12105,12107,12111,12114,12117,12118,12121,12124,12127,12130,12131,12132,12134,12137,12140,12145,12150,12156,12168,12174,12176,12182,12191,12192,12194,12196,12200,12202,12204,12206,12209,12211,12216,12218,12220,12222,12224,12227,12229,12231,12234,12243,12252,12256,12258,12260,12263,12268,12271,12277,12292,12295,12297,12304,12311,12313,12317,12318,12319,12325,12326,12328,12332,12335,12338,12340,12344,12345,12347,12350,12356,12360,12364,12366,12368,12374,12376,12377,12379,12382,12383,12385,12388,12389,12390,12397,12402,12404,12405,12407,12409,12411,12413,12418,12431,12514,12679,12685,12688,12693,12701,12703,12704,12707,12711,12713,12716,12718,12721,12725,12731,12733,12735,12737,12739,12741,12743,12747,12749,12766,12769,12771,12772,12774,12776,12780,12806,12807,12816,12818,12857,13069,13080,13085,13087,13090,13256,13258,13410,13412,13414,13417,13531,13537,13548,13723,13842,13852,13855,13857,13860,13861,13865,13868,13874,13877,14026,14034,14038,14043,14166,14168,14171,14175,14184,14187,14197,14199,14201,14202,14211,14215,14223,14235,14246,14248,14258,14401,14405,14407,14412,14424,14428,14429,14430,14432,14435,14436,14439,14443,14446,14452,14460,14472,14479,14527,14529,14530,14531,14532,14533, +chr19 47503318 47514068 m54329U_210326_192251/32048678/ccs 160,367,510,757,947,1077,1265,1488,1666,1865,2058,2247,2446,2665,2869,3104,3298,3565,3736,3855,4119,4332,4498,4710,4885,5107,5294,5505,5672,5906,6083,6271,6463,6626,6802,7032,7206,7382,7589,7759,8022,8212,8389,8674,8809,9004,9204,9419,9603,9756,9966,10128,10362,10516, 141,85,142,125,98,119,145,151,127,154,118,145,147,133,148,112,120,75,118,134,86,101,135,144,173,108,127,111,132,173,140,134,146,126,136,139,136,157,134,123,112,120,108,134,159,123,150,142,106,114,115,146,141,117, 105,301,452,652,882,1045,1196,1410,1639,1793,2019,2176,2392,2593,2798,3017,3216,3418,3640,3854,3989,4205,4433,4633,4854,5058,5215,5421,5616,5804,6079,6223,6405,6609,6752,6938,7171,7342,7539,7723,7882,8134,8332,8497,8808,8968,9127,9354,9561,9709,9870,10081,10274,10503,10633, 55,66,58,105,65,32,69,78,27,72,39,71,54,72,71,87,82,147,96,1,130,127,65,77,31,49,79,84,56,102,4,48,58,17,50,94,35,40,50,36,140,78,57,177,1,36,77,65,42,47,96,47,88,13,57, 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79,105,110,121,127,128,130,131,134,135,138,141,143,148,151,158,159,301,305,315,320,322,323,325,327,329,331,344,347,348,351,352,353,357,359,365,366,452,454,494,509,536,652,655,656,659,664,673,675,676,681,684,686,689,691,696,705,707,709,713,714,717,718,723,728,729,736,741,743,746,748,750,753,755,756,882,905,910,935,937,940,946,1045,1049,1052,1055,1062,1068,1071,1072,1074,1076,1196,1198,1231,1235,1239,1241,1245,1249,1251,1254,1256,1257,1262,1263,1264,1410,1417,1421,1423,1425,1427,1429,1431,1464,1466,1469,1471,1475,1487,1639,1648,1654,1662,1663,1665,1750,1793,1828,1829,1831,1832,1846,1857,1859,1864,2019,2024,2026,2029,2046,2048,2051,2057,2113,2176,2186,2188,2190,2192,2194,2198,2204,2206,2209,2213,2215,2218,2219,2226,2230,2231,2236,2245,2246,2392,2396,2415,2419,2420,2423,2429,2432,2434,2435,2436,2439,2441,2442,2443,2445,2593,2607,2616,2621,2623,2627,2632,2635,2637,2641,2646,2647,2651,2654,2661,2662,2664,2798,2802,2810,2817,2824,2825,2827,2829,2833,2836,2838,2843,2854,2861,2863,2864,2866,2868,2905,3017,3019,3024,3041,3043,3047,3049,3053,3056,3063,3066,3067,3068,3075,3079,3091,3093,3095,3096,3099,3103,3216,3222,3223,3228,3241,3243,3245,3249,3252,3253,3258,3260,3261,3262,3265,3269,3272,3276,3278,3297,3418,3423,3425,3427,3432,3442,3444,3448,3452,3454,3457,3460,3462,3469,3473,3474,3478,3481,3482,3483,3485,3486,3491,3503,3519,3525,3531,3533,3538,3541,3543,3554,3555,3558,3560,3561,3563,3564,3640,3643,3645,3646,3649,3662,3667,3668,3670,3679,3699,3702,3704,3707,3709,3710,3712,3714,3735,3854,3989,3995,3998,4006,4017,4020,4021,4023,4025,4027,4029,4030,4034,4036,4037,4041,4045,4051,4057,4060,4063,4068,4070,4072,4074,4083,4086,4087,4090,4091,4094,4098,4101,4108,4118,4205,4215,4218,4220,4222,4227,4228,4230,4232,4234,4235,4239,4241,4243,4246,4247,4251,4253,4257,4259,4264,4265,4269,4271,4281,4283,4287,4288,4294,4296,4302,4303,4305,4307,4310,4312,4314,4317,4321,4325,4331,4433,4437,4441,4445,4449,4451,4456,4459,4460,4463,4468,4470,4473,4476,4481,4483,4488,4494,4497,4633,4637,4651,4654,4661,4666,4667,4671,4674,4675,4683,4688,4692,4695,4697,4698,4705,4709,4854,4858,4862,4866,4868,4873,4878,4880,4884,5058,5061,5066,5073,5077,5080,5082,5088,5106,5215,5229,5232,5252,5254,5263,5266,5274,5275,5276,5278,5281,5284,5286,5288,5293,5421,5440,5443,5446,5450,5452,5463,5466,5468,5475,5496,5504,5616,5630,5634,5635,5638,5642,5644,5650,5652,5659,5665,5671,5804,5812,5814,5819,5823,5826,5828,5830,5831,5834,5836,5839,5842,5846,5849,5851,5853,5854,5855,5857,5861,5869,5871,5873,5878,5882,5891,5894,5897,5905,6079,6082,6223,6235,6237,6240,6247,6248,6258,6260,6263,6264,6268,6270,6405,6414,6417,6421,6450,6451,6454,6456,6462,6609,6611,6612,6614,6625,6752,6759,6767,6772,6773,6775,6777,6801,6938,6943,6951,6962,6968,6972,6976,7014,7031,7171,7174,7178,7205,7342,7345,7350,7369,7373,7381,7539,7541,7544,7546,7547,7549,7556,7565,7588,7723,7725,7727,7729,7733,7734,7739,7740,7744,7748,7751,7758,7882,7893,7896,7897,7900,7903,7906,7907,7909,7911,7914,7918,7920,7921,7928,7932,7934,7936,7937,7942,7946,7948,7949,7951,7953,7955,7958,7961,7964,7968,7972,7994,7997,8005,8010,8012,8021,8134,8139,8143,8145,8148,8149,8151,8153,8156,8159,8161,8169,8190,8191,8195,8198,8211,8332,8339,8343,8345,8348,8350,8354,8359,8360,8364,8366,8367,8369,8374,8382,8388,8497,8505,8509,8511,8515,8526,8529,8532,8533,8535,8538,8539,8541,8545,8551,8557,8559,8563,8566,8569,8571,8573,8577,8583,8585,8588,8591,8594,8597,8599,8602,8603,8604,8606,8607,8609,8610,8616,8618,8621,8624,8629,8632,8633,8639,8643,8649,8652,8656,8658,8659,8666,8670,8673,8808,8968,8970,8973,8987,8994,8998,9000,9003,9127,9149,9175,9180,9181,9189,9196,9199,9203,9328,9354,9358,9360,9362,9368,9370,9372,9375,9379,9386,9418,9561,9565,9568,9577,9581,9583,9591,9602,9709,9711,9725,9726,9731,9736,9739,9741,9748,9750,9753,9755,9870,9873,9888,9891,9895,9897,9898,9901,9914,9916,9921,9925,9928,9931,9933,9934,9938,9955,9959,9963,9965,10081,10100,10113,10115,10117,10119,10120,10127,10274,10290,10291,10295,10298,10300,10302,10311,10316,10318,10334,10335,10339,10341,10344,10346,10349,10350,10352,10354,10361,10447,10503,10507,10512,10515,10633,10636,10643,10644,10648,10650,10652,10656,10662,10671,10674,10677,10681,10684,10690, 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+chr19 47506015 47516286 m54329U_210323_190418/26544028/ccs 140,345,516,681,904,1113,1291,1479,1679,1855,2033,2234,2377,2567,2744,2927,3122,3271,3465,3628,3835,4005,4198,4399,4633,4801,5040,5220,5423,5646,5857,6031,6209,6422,6608,6755,7008,7195,7376,7558,7738,7919,8092,8244,8482,8681,8863,9766,10071, 138,130,158,171,132,120,131,133,135,128,142,134,138,139,124,128,132,155,120,132,160,159,157,135,88,146,131,162,135,136,143,156,145,139,136,135,125,147,138,145,124,133,114,135,115,130,113,260,108, 109,278,475,674,852,1036,1233,1422,1612,1814,1983,2175,2368,2515,2706,2868,3055,3254,3426,3585,3760,3995,4164,4355,4534,4721,4947,5171,5382,5558,5782,6000,6187,6354,6561,6744,6890,7133,7342,7514,7703,7862,8052,8206,8379,8597,8811,8976,10026,10179, 31,67,41,7,52,77,58,57,67,41,50,59,9,52,38,59,67,17,39,43,75,10,34,44,99,80,93,49,41,88,75,31,22,68,47,11,118,62,34,44,35,57,40,38,103,84,52,790,45,56, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,243,0,0,0,0,0,0,0,0,0,0,248,0,0, 108,111,114,118,125,128,130,135,139,278,285,286,289,305,309,318,320,333,342,344,475,498,504,513,515,674,680,852,867,874,876,881,903,1036,1041,1052,1056,1060,1065,1068,1070,1072,1075,1077,1079,1081,1085,1098,1112,1233,1239,1242,1243,1246,1248,1250,1252,1255,1257,1265,1271,1275,1278,1284,1286,1290,1422,1424,1427,1435,1437,1441,1444,1447,1453,1458,1462,1465,1478,1612,1616,1631,1632,1640,1644,1645,1649,1651,1653,1669,1672,1675,1678,1814,1820,1824,1826,1833,1838,1841,1854,1983,1986,1988,1989,2007,2012,2015,2032,2059,2175,2185,2191,2204,2206,2209,2212,2216,2219,2223,2227,2229,2233,2368,2370,2376,2515,2517,2520,2526,2529,2531,2533,2534,2540,2542,2549,2551,2554,2559,2566,2706,2715,2723,2726,2727,2728,2731,2734,2743,2868,2870,2877,2883,2885,2887,2889,2893,2899,2901,2903,2904,2906,2926,3055,3057,3059,3061,3085,3086,3089,3091,3093,3094,3099,3101,3106,3110,3113,3115,3121,3254,3256,3258,3260,3267,3270,3426,3432,3438,3440,3442,3444,3447,3449,3452,3456,3464,3585,3598,3601,3602,3608,3612,3616,3621,3622,3625,3627,3760,3768,3779,3787,3823,3828,3831,3834,3995,4004,4164,4176,4178,4188,4190,4197,4355,4361,4370,4373,4376,4385,4388,4390,4395,4398,4534,4552,4556,4558,4559,4568,4570,4576,4579,4580,4584,4609,4611,4616,4632,4721,4724,4735,4739,4742,4746,4747,4752,4754,4758,4761,4764,4766,4770,4771,4776,4777,4779,4782,4785,4789,4791,4793,4795,4798,4800,4947,4954,4958,4963,4976,4980,4984,4989,4991,4993,4996,4999,5000,5004,5009,5018,5024,5025,5039,5171,5180,5187,5188,5191,5205,5209,5210,5212,5219,5382,5387,5388,5390,5394,5396,5399,5402,5407,5410,5413,5415,5419,5422,5558,5561,5564,5566,5567,5576,5579,5581,5590,5593,5597,5599,5602,5603,5604,5614,5616,5618,5619,5623,5625,5630,5636,5638,5639,5641,5645,5782,5787,5795,5801,5805,5808,5815,5816,5819,5822,5823,5825,5828,5843,5853,5856,6000,6005,6010,6016,6020,6027,6030,6187,6188,6190,6192,6194,6195,6199,6201,6203,6204,6205,6208,6354,6355,6358,6360,6362,6365,6373,6387,6390,6393,6408,6412,6415,6416,6421,6561,6584,6587,6590,6607,6744,6751,6754,6890,6892,6901,6907,6913,6916,6920,6922,6928,6929,6931,6934,6938,6941,6944,6946,6949,6954,6960,6963,6967,6972,6976,6978,6981,6982,6984,6986,6988,6993,6996,7002,7007,7133,7137,7138,7143,7144,7149,7154,7156,7160,7162,7163,7166,7169,7171,7173,7174,7178,7179,7181,7185,7187,7188,7191,7194,7342,7343,7349,7361,7365,7367,7369,7371,7375,7514,7525,7528,7536,7538,7540,7543,7547,7550,7552,7557,7703,7705,7707,7709,7715,7717,7719,7721,7725,7727,7728,7737,7862,7876,7883,7888,7890,7894,7897,7898,7900,7905,7909,7916,7918,8052,8058,8066,8068,8076,8081,8091,8206,8224,8229,8232,8236,8237,8239,8240,8242,8243,8379,8390,8400,8401,8403,8405,8407,8412,8413,8415,8418,8422,8425,8429,8431,8434,8437,8441,8442,8444,8446,8452,8454,8458,8469,8476,8481,8597,8602,8603,8605,8610,8616,8621,8623,8627,8629,8631,8634,8636,8638,8642,8644,8645,8657,8661,8663,8664,8670,8672,8676,8680,8811,8816,8818,8825,8828,8830,8836,8838,8843,8845,8847,8848,8850,8856,8862,8976,8979,9002,9003,9005,9007,9009,9010,9014,9015,9019,9021,9030,9034,9037,9040,9044,9055,9059,9060,9092,9093,9096,9103,9106,9108,9121,9129,9131,9139,9142,9161,9163,9165,9168,9170,9179,9180,9186,9188,9189,9191,9193,9220,9221,9228,9231,9233,9235,9237,9243,9248,9250,9252,9253,9257,9259,9262,9266,9269,9271,9275,9277,9280,9281,9285,9286,9287,9291,9293,9294,9318,9322,9324,9325,9328,9331,9334,9335,9338,9341,9344,9347,9348,9351,9354,9357,9363,9368,9374,9386,9409,9410,9412,9414,9418,9420,9422,9424,9429,9434,9436,9438,9440,9442,9445,9447,9449,9452,9461,9470,9471,9474,9476,9478,9479,9481,9486,9489,9511,9514,9516,9525,9527,9528,9531,9532,9534,9540,9541,9542,9551,9555,9556,9557,9558,9561,9563,9567,9568,9570,9573,9574,9575,9605,9606,9618,9620,9625,9627,9628,9630,9632,9634,9639,9640,9641,9643,9644,9645,9646,9647,9651,9652,9654,9657,9658,9660,9662,9664,9666,9668,9671,9672,9673,9684,9688,9690,9691,9693,9703,9707,9711,9712,9713,9718,9720,9723,9727,9730,9732,9734,9738,9744,9754,9757,9759,9765,10026,10028,10031,10032,10034,10035,10046,10048,10051,10070,10179,10196,10222,10228,10230,10234, +chr19 47506215 47513023 m64076_221119_202646/55771763/ccs 170,333,562,725,915,1132,1341,1496,1641,1820,2029,2228,2401,2588,2742,2940,3067,3256,3460,3633,3841,4030,4168,4356,4524,4835,4991,5166,5328,5680,5852,5997,6156,6393, 134,141,112,99,124,92,98,117,123,162,117,137,141,109,108,126,140,128,130,148,120,100,134,103,103,89,86,111,96,87,85,111,100,95, 106,304,474,674,824,1039,1224,1439,1613,1764,1982,2146,2365,2542,2697,2850,3066,3207,3384,3590,3781,3961,4130,4302,4459,4627,4924,5077,5277,5424,5767,5937,6108,6256, 64,29,88,51,91,93,117,57,28,56,47,82,36,46,45,90,1,49,76,43,60,69,38,54,65,208,67,89,51,256,85,60,48,137, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,249,0,0,0,0,0,0,0,0, 105,109,118,120,125,141,142,144,148,150,154,157,159,160,164,167,169,304,310,313,315,321,325,330,332,474,480,482,483,487,496,498,502,503,507,510,516,520,526,528,533,543,549,558,561,674,676,681,688,696,698,703,707,711,712,717,724,824,830,836,839,841,844,846,852,856,860,865,866,868,870,872,875,877,879,881,885,891,893,895,898,904,908,912,914,1039,1042,1046,1048,1050,1052,1055,1057,1063,1065,1067,1071,1074,1075,1078,1080,1084,1086,1090,1091,1093,1097,1101,1106,1108,1112,1125,1131,1224,1227,1228,1235,1237,1241,1244,1247,1250,1253,1258,1259,1262,1267,1270,1274,1278,1281,1284,1287,1289,1297,1298,1300,1305,1308,1311,1313,1317,1320,1323,1327,1336,1339,1340,1439,1444,1448,1450,1452,1454,1455,1459,1468,1471,1474,1482,1484,1487,1493,1495,1613,1623,1625,1632,1637,1640,1764,1782,1785,1787,1788,1791,1795,1799,1806,1811,1814,1819,1982,1999,2003,2005,2008,2015,2022,2026,2028,2146,2153,2160,2162,2164,2167,2169,2182,2185,2186,2189,2191,2197,2200,2203,2217,2219,2227,2365,2367,2368,2371,2373,2380,2385,2387,2390,2397,2398,2400,2542,2546,2555,2557,2570,2583,2587,2697,2698,2703,2717,2721,2722,2725,2729,2730,2731,2732,2736,2737,2741,2850,2854,2856,2858,2860,2883,2884,2885,2888,2890,2892,2893,2894,2898,2900,2905,2909,2912,2914,2916,2917,2920,2922,2925,2932,2939,3066,3207,3227,3229,3231,3236,3237,3241,3243,3246,3248,3255,3384,3388,3392,3408,3411,3414,3415,3420,3421,3423,3424,3426,3429,3430,3434,3436,3437,3446,3449,3452,3455,3459,3590,3598,3620,3621,3626,3629,3632,3781,3782,3793,3797,3799,3801,3805,3806,3812,3822,3824,3829,3840,3961,3963,3966,3973,3978,3980,3985,3987,3990,3994,3996,3997,4002,4011,4029,4130,4146,4148,4152,4154,4158,4167,4235,4302,4305,4307,4310,4312,4314,4316,4317,4318,4321,4322,4325,4331,4339,4349,4353,4355,4459,4473,4476,4479,4482,4483,4488,4489,4490,4495,4497,4500,4504,4506,4508,4511,4521,4523,4627,4630,4639,4642,4651,4652,4654,4657,4658,4663,4666,4667,4669,4673,4674,4678,4680,4682,4685,4688,4693,4695,4699,4702,4705,4707,4712,4713,4715,4717,4721,4724,4727,4730,4731,4733,4735,4742,4743,4747,4749,4753,4758,4760,4761,4762,4766,4768,4769,4771,4774,4775,4779,4783,4784,4786,4788,4791,4794,4795,4799,4804,4806,4809,4811,4813,4815,4819,4820,4825,4826,4834,4924,4926,4930,4933,4934,4937,4939,4940,4943,4945,4952,4956,4960,4961,4963,4966,4968,4975,4979,4983,4990,5077,5088,5091,5096,5098,5104,5111,5114,5118,5122,5124,5126,5127,5130,5135,5137,5142,5146,5150,5151,5154,5158,5163,5165,5277,5281,5284,5286,5288,5293,5297,5301,5304,5306,5310,5312,5314,5320,5327,5424,5429,5431,5434,5436,5440,5445,5450,5452,5455,5459,5461,5465,5467,5473,5478,5479,5480,5482,5483,5485,5487,5488,5490,5491,5493,5495,5497,5504,5505,5507,5508,5509,5511,5513,5520,5526,5543,5546,5567,5636,5638,5642,5648,5651,5656,5662,5668,5679,5767,5776,5778,5781,5783,5786,5790,5793,5795,5800,5802,5805,5811,5812,5815,5818,5819,5822,5825,5827,5832,5835,5836,5838,5842,5844,5846,5847,5851,5937,5942,5951,5973,5977,5983,5985,5987,5994,5996,6108,6126,6130,6136,6139,6142,6146,6149,6150,6155,6256,6263,6267,6268,6278,6283,6286,6290,6293,6294,6297,6299,6301,6303,6306,6307,6309,6314,6319,6323,6329,6330,6331,6335,6338,6340,6342,6346,6348,6352,6356,6366,6379,6382,6385,6392,6488,6495,6498,6499,6500,6503,6505,6508,6509,6511,6519,6520,6522,6524,6526,6529,6531,6534,6539,6540,6541,6546,6547,6549,6550,6552,6553,6555,6556,6559,6566,6570,6576,6579,6583,6586,6588,6589,6590,6592,6593,6600,6605,6606,6608,6613,6616,6619,6621,6622,6625,6626,6629,6631,6633,6634,6636,6639,6641,6642,6646,6648,6651,6652,6655,6657,6659,6660,6661,6664,6668,6670,6674,6678,6685,6689,6691,6693,6694,6699,6769,6790,6793, +chr19 47506222 47514314 m84008_230107_003043_s1/177932302/ccs 80,246,416,577,767,977,1182,1410,1581,1759,1976,2169,2333,2533,2735,2884,3063,3257,3478,3669,3898,4081,4254,4430,4646,4866,5044,5214,5449,5644,5811,5974,6180,6374,6719,6876,7056,7244,7426,7573,7741, 105,118,120,124,117,138,150,118,147,153,123,115,132,97,106,135,193,151,144,125,143,133,147,190,151,150,169,164,139,131,117,159,146,274,107,131,146,148,141,146,145, 185,364,536,701,884,1115,1332,1528,1728,1912,2099,2284,2465,2630,2841,3019,3256,3408,3622,3794,4041,4214,4401,4620,4797,5016,5213,5378,5588,5775,5928,6133,6326,6648,6826,7007,7202,7392,7567,7719,7886, 61,52,41,66,93,67,78,53,31,64,70,49,68,105,43,44,1,70,47,104,40,40,29,26,69,28,1,71,56,36,46,47,48,71,50,49,42,34,6,22,40, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 10,12,15,20,25,39,42,56,79,185,187,189,193,196,199,201,205,206,208,211,217,221,245,364,369,373,375,381,383,398,401,404,406,408,415,536,538,542,551,554,563,567,576,701,708,710,713,716,722,725,730,734,736,737,740,753,758,766,884,886,888,891,898,901,905,907,915,918,922,927,932,934,936,940,948,953,958,960,964,965,976,1115,1117,1122,1124,1125,1129,1132,1138,1144,1147,1150,1155,1157,1170,1174,1177,1178,1181,1220,1332,1337,1343,1345,1351,1367,1387,1394,1401,1409,1528,1532,1542,1546,1551,1556,1559,1564,1566,1577,1580,1728,1743,1750,1754,1757,1758,1912,1927,1935,1939,1943,1947,1959,1965,1975,2021,2099,2103,2109,2112,2118,2131,2133,2136,2139,2142,2153,2157,2160,2162,2168,2284,2295,2307,2309,2312,2332,2465,2467,2468,2473,2475,2489,2493,2496,2498,2504,2507,2512,2520,2523,2526,2530,2532,2630,2634,2648,2654,2656,2660,2662,2665,2669,2675,2677,2679,2681,2683,2685,2690,2691,2693,2696,2698,2710,2714,2715,2718,2722,2729,2734,2841,2843,2847,2849,2878,2883,3019,3023,3027,3031,3034,3035,3046,3048,3050,3059,3062,3256,3408,3417,3422,3427,3429,3442,3445,3461,3465,3468,3477,3575,3622,3631,3636,3664,3665,3668,3794,3805,3815,3827,3828,3831,3836,3838,3842,3844,3851,3852,3854,3856,3877,3878,3880,3881,3885,3888,3892,3897,4041,4051,4080,4214,4231,4250,4253,4295,4369,4401,4421,4422,4428,4429,4504,4593,4620,4623,4632,4635,4644,4645,4797,4804,4806,4812,4813,4827,4830,4837,4839,4843,4845,4851,4855,4857,4863,4865,5016,5019,5020,5021,5025,5027,5032,5034,5037,5043,5213,5378,5398,5404,5407,5411,5413,5416,5422,5424,5427,5429,5438,5443,5445,5448,5588,5609,5610,5612,5615,5616,5643,5775,5778,5794,5797,5803,5810,5928,5940,5942,5948,5951,5952,5956,5973,6133,6137,6140,6141,6144,6146,6148,6151,6155,6157,6159,6161,6163,6167,6168,6170,6173,6175,6176,6179,6326,6331,6333,6337,6339,6343,6347,6350,6373,6648,6659,6661,6680,6682,6684,6689,6690,6695,6700,6703,6715,6718,6826,6851,6868,6873,6875,7007,7009,7016,7020,7029,7039,7041,7046,7055,7202,7203,7207,7211,7218,7219,7225,7226,7237,7243,7392,7394,7398,7410,7422,7425,7567,7569,7572,7719,7727,7730,7736,7740,7886,7888,7890,7893,7896,7898,7900,7902,7903,7905,7907,7910,7913,7914,7922,7925,8050,8060,8062,8069, +chr19 47506398 47523529 m54329U_210326_192251/95750173/ccs 139,321,518,732,919,1096,1311,1485,1662,1829,2011,2158,2357,2518,2676,2829,3169,3329,3536,3722,3925,4102,4300,4484,4652,4831,5048,5267,5420,5619,5798,5929,6156,6300,6646,6802,6993,7136,7288,7575,7726,7897,8090,8299,8448,9255,9615,9759,9901,10077,10261,10479,10832,10995,11201,11340,11520,11693,11994,12214,12367,12637,12801,13035,13201,13368,13539,13749,13910,14242,14415,14613,14797,14995,15136,15334,15507,16027,16199,16334,16668, 136,140,123,104,122,129,116,138,139,134,119,126,97,119,100,237,117,127,134,140,104,121,144,146,146,139,139,126,139,133,130,123,102,271,126,133,142,124,254,114,128,113,112,121,116,234,118,130,107,124,151,145,134,113,110,152,117,103,109,128,253,135,147,106,139,141,140,139,270,117,124,122,124,120,143,116,430,130,132,291,347, 82,275,461,641,836,1041,1225,1427,1623,1801,1963,2130,2284,2454,2637,2776,3066,3286,3456,3670,3862,4029,4223,4444,4630,4798,4970,5187,5393,5559,5752,5928,6052,6258,6571,6772,6935,7135,7260,7542,7689,7854,8010,8202,8420,8564,9489,9733,9889,10008,10201,10412,10624,10966,11108,11311,11492,11637,11796,12103,12342,12620,12772,12948,13141,13340,13509,13679,13888,14180,14359,14539,14735,14921,15115,15279,15450,15937,16157,16331,16625,17015, 57,46,57,91,83,55,86,58,39,28,48,28,73,64,39,53,103,43,80,52,63,73,77,40,22,33,78,80,27,60,46,1,104,42,75,30,58,1,28,33,37,43,80,97,28,691,126,26,12,69,60,67,208,29,93,29,28,56,198,111,25,17,29,87,60,28,30,70,22,62,56,74,62,74,21,55,57,90,42,3,43,1, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,250,0,0,0,0,0,0,0,0,0,0,0,0,251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 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+chr19 47506417 47532580 m64076_221119_202646/93981333/ccs 212,417,570,740,926,1139,1290,1487,1655,1845,2021,2198,2395,2548,2711,2860,3069,3274,3422,3613,3812,4008,4160,4394,4605,4789,4974,5154,5341,5522,5661,5985,6166,6509,6647,6836,7018,7190,7364,7540,7732,7934,8112,8228,8397,9219,9464,9564,9706,9931,10225,10403,10561,10760,10950,11178,11370,11519,12032,12340,12520,12665,12879,13092,13258,13493,13662,13764,13917,14107,14253,14439,14673,14820,15002,15204,15382,15564,15888,16091,16279,16394,16871,17091,17241,17393,17565,17789,17955,18133,18307,18468,18649,18807,18991,19199,19350,19964,20152,20239,20328,20491,20826,21048,21219,21374,21549,21750,21945,22089,22260,22423,22568,22743,22920,23117,23294,23469,23628,23839,23992,24122,24345,24518,24698,24858,25027,25259,25486,25684,25858, 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42,66,60,73,47,33,13,33,63,45,37,44,224,53,1,32,2,37,59,77,51,9,55,67,36,83,78,62,36,23,29,26,41,223,31,1,10,11,4,41,22,28,728,1,39,41,30,1,80,42,56,64,49,52,19,180, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,249,0,0,0,0,0,0,0,0,0,0,0,0,251, 10,14,22,25,27,29,33,37,169,175,178,180,184,185,189,192,201,208,210,334,338,358,363,370,385,393,394,399,518,521,523,526,534,538,542,547,548,550,552,554,559,561,563,567,573,577,711,715,721,724,725,728,730,732,734,737,739,747,749,753,757,766,768,783,906,909,917,919,923,926,929,932,935,940,944,952,1094,1112,1121,1123,1125,1126,1295,1305,1307,1464,1467,1469,1473,1477,1481,1488,1493,1496,1628,1664,1677,1687,1690,1820,1825,1828,1831,1835,1842,1844,1849,1864,1996,1998,2001,2012,2014,2015,2019,2021,2023,2029,2032,2155,2157,2179,2181,2187,2189,2198,2321,2322,2325,2328,2339,2345,2351,2353,2356,2360,2372,2384,2453,2469,2472,2478,2480,2486,2489,2494,2497,2506,2511,2514,2518,2538,2540,2542,2544,2675,2685,2688,2689,2691,2701,2710,2714,2722,2727,2856,3028,3030,3033,3038,3040,3042,3043,3054,3056,3059,3220,3221,3376,3381,3382,3384,3386,3387,3388,3390,3394,3395,3399,3401,3405,3412,3560,3568,3576,3579,3583,3588,3590,3592,3595,3596,3601,3605,3618,3742,3746,3763,3765,3771,3774,3775,3776,3778,3781,3782,3784,3797,3802,3818,3941,3944,3948,3951,3958,3960,3962,3963,3966,3968,3970,3971,3972,3975,3978,3989,3991,4143,4151,4272,4287,4288,4290,4292,4326,4455,4463,4472,4475,4478,4479,4483,4488,4490,4493,4495,4497,4499,4503,4504,4518,4521,4663,4666,4667,4670,4673,4676,4684,4688,4689,4691,4698,4834,4842,4847,4849,4854,4859,4861,4863,4866,4867,4869,4873,4875,4878,4881,4884,4886,4889,4892,4894,4898,4901,4911,4916,5027,5030,5035,5037,5039,5045,5055,5058,5060,5061,5062,5069,5072,5076,5078,5081,5082,5083,5089,5090,5093,5095,5097,5098,5102,5104,5261,5266,5270,5272,5276,5278,5280,5284,5287,5301,5302,5304,5322,5451,5460,5462,5465,5467,5470,5471,5486,5644,5645,5656,5666,5826,5834,5837,5844,5848,5854,6007,6019,6022,6024,6030,6032,6203,6208,6210,6215,6218,6230,6233,6242,6243,6362,6382,6388,6394,6397,6403,6409,6410,6412,6415,6419,6420,6422,6425,6427,6430,6431,6435,6437,6441,6444,6448,6453,6457,6462,6469,6474,6548,6566,6572,6577,6581,6584,6611,6721,6733,6735,6738,6740,6751,6869,6896,7156,7159,7160,7165,7331,7333,7341,7509,7512,7642,7654,7661,7664,7672,7682,8077,8098,8239,8242,8246,8250,8252,8254,8257,8258,8261,8264,8266,8411,8414,8419,8421,8423,8426,8428,8434,8436,8440,8442,8446,8450,8451,8453,8457,8463,8476,8477,8479,8481,8483,8484,8488,8492,8494,8503,8507,8508,8510,8513,8517,8528,8532,8533,8594,8602,8604,8612,8615,8624,8634,8636,8638,8641,8643,8650,8651,8652,8658,8660,8661,8663,8681,8692,8693,8700,8703,8705,8707,8709,8714,8719,8721,8723,8724,8728,8730,8740,8742,8746,8748,8751,8752,8756,8757,8758,8762,8764,8765,8776,8788,8793,8795,8796,8799,8802,8805,8806,8809,8812,8815,8818,8819,8820,8822,8825,8828,8833,8838,8844,8857,8863,8865,8880,8881,8883,8885,8889,8891,8893,8895,8898,8900,8905,8907,8909,8911,8913,8916,8918,8920,8932,8941,8947,8949,8952,8957,8959,8960,8962,8981,8984,8986,8993,8994,8995,8997,8998,9000,9002,9003,9006,9007,9008,9013,9014,9015,9017,9021,9022,9024,9027,9029,9033,9034,9036,9039,9040,9070,9076,9077,9078,9083,9085,9092,9093,9095,9097,9099,9101,9106,9112,9119,9122,9125,9127,9131,9133,9136,9137,9138,9283,9399,9404,9409,9413,9419,9423,9427,9429,9431,9433,9435,9437,9573,9578,9579,9581,9588,9595,9597,9598,9599,9602,9603,9605,9607,9611,9613,9739,9746,9748,9751,9754,9757,9759,9760,9768,9890,9919,10053,10056,10083,10084,10095,10098,10100,10102,10105,10106,10109,10111,10113,10125,10132,10290,10292,10297,10300,10304,10307,10310,10317,10320,10321,10331,10461,10493,10496,10499,10500,10511,10513,10516,10671,10673,10674,10675,10678,10679,10681,10683,10688,10691,10693,10696,10698,10700,10712,10714,10716,10717,10722,10731,10734,10863,10867,10872,10875,10877,10878,10881,10885,10887,10889,10890,10911,11044,11069,11077,11095,11567,11570,11574,11578,11580,11585,11714,11724,11729,11730,11736,11737,11739,11741,11743,11744,11746,11747,11748,11750,11751,11753,11754,11755,11756,11758,11760,11761,11765,11768,11771,11774,11775,11777,11778,11780,11783,11784,11788,11790,11792,11794,11797,11799,11802,11804,11806,11809,11812,11818,11820,11824,11827,11828,11830,11833,11835,11836,11841,11842,11843,11844,11847,11848,11852,11854,11856,11858,11862,11866,11868,11870,11871,11872,11874,11881,11882,11884,11886,11887,11888,11893, +chr19 47506600 47515470 m84008_230107_003043_s1/59839140/ccs 77,354,530,709,1111,1277,1460,1627,1785,1957,2154,2340,2535,2684,2930,3073,3286,3473,3662,3835,4042,4255,4433,4574,4767,4972,5120,5347,5480,5662,5839,6040,6259,6412,6601,6921,7094,7365,7569,7689,7903,8073,8263,8444,8551, 241,142,124,108,110,120,154,137,144,129,104,162,120,170,117,130,139,136,121,131,118,115,139,149,146,147,130,107,142,107,129,116,102,123,278,121,270,120,119,141,114,121,139,76,80, 318,496,654,817,1221,1397,1614,1764,1929,2086,2258,2502,2655,2854,3047,3203,3425,3609,3783,3966,4160,4370,4572,4723,4913,5119,5250,5454,5622,5769,5968,6156,6361,6535,6879,7042,7364,7485,7688,7830,8017,8194,8402,8520, 36,34,55,294,56,63,13,21,28,68,82,33,29,76,26,83,48,53,52,76,95,63,2,44,59,1,97,26,40,70,72,103,51,66,42,52,1,84,1,73,56,69,42,31, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 20,23,26,28,30,59,61,65,69,73,76,318,330,332,338,339,353,496,500,506,510,529,654,657,661,663,665,667,670,672,680,682,686,689,701,708,817,839,842,843,848,850,852,856,859,862,865,868,873,874,877,882,889,893,896,902,912,920,923,930,938,940,942,1000,1002,1016,1018,1020,1023,1029,1031,1040,1042,1046,1054,1058,1059,1063,1065,1067,1069,1070,1074,1102,1108,1110,1221,1225,1228,1234,1252,1255,1268,1272,1276,1397,1400,1403,1406,1410,1421,1426,1431,1432,1442,1446,1450,1457,1459,1614,1618,1623,1626,1764,1775,1777,1779,1782,1784,1929,1931,1934,1945,1948,1954,1956,2035,2086,2089,2094,2096,2100,2102,2114,2117,2119,2125,2128,2133,2136,2140,2141,2144,2147,2151,2153,2258,2269,2275,2281,2283,2286,2296,2298,2300,2302,2304,2306,2311,2312,2331,2336,2339,2502,2504,2512,2514,2523,2526,2534,2655,2667,2669,2671,2675,2677,2680,2683,2854,2856,2859,2861,2873,2876,2890,2900,2903,2908,2914,2929,3047,3049,3065,3068,3072,3203,3234,3239,3242,3250,3251,3256,3271,3277,3285,3384,3425,3427,3429,3435,3437,3442,3444,3447,3451,3456,3460,3462,3464,3466,3472,3609,3610,3615,3617,3620,3624,3637,3648,3650,3655,3658,3661,3783,3786,3789,3795,3798,3804,3805,3808,3811,3812,3813,3816,3819,3821,3827,3828,3830,3834,3966,3969,3979,3983,3984,3986,3989,3990,3994,4009,4019,4021,4033,4041,4160,4162,4166,4169,4171,4173,4177,4178,4183,4184,4186,4192,4196,4200,4202,4205,4207,4210,4215,4218,4220,4237,4239,4242,4245,4254,4370,4387,4395,4396,4400,4407,4411,4416,4421,4423,4425,4431,4432,4526,4572,4573,4723,4730,4734,4736,4739,4742,4747,4754,4762,4763,4766,4913,4922,4924,4926,4930,4932,4942,4946,4949,4958,4968,4971,5119,5250,5254,5256,5260,5263,5266,5268,5270,5280,5282,5285,5288,5291,5296,5299,5301,5303,5321,5346,5454,5456,5458,5459,5462,5463,5465,5471,5476,5479,5622,5640,5642,5644,5646,5647,5650,5653,5654,5658,5661,5769,5776,5782,5784,5788,5791,5793,5794,5797,5800,5806,5809,5811,5813,5816,5826,5828,5838,5968,5980,5985,5986,5990,5993,5996,6003,6009,6013,6018,6020,6026,6029,6039,6156,6159,6180,6185,6193,6216,6218,6231,6235,6236,6258,6361,6367,6370,6374,6383,6385,6388,6391,6409,6411,6535,6537,6549,6550,6553,6555,6562,6566,6568,6569,6572,6575,6577,6579,6580,6584,6585,6587,6589,6591,6593,6594,6597,6600,6879,6881,6885,6901,6904,6907,6920,7042,7045,7054,7056,7057,7063,7067,7070,7073,7076,7078,7080,7087,7093,7364,7485,7507,7509,7515,7517,7519,7521,7524,7529,7533,7541,7544,7549,7551,7559,7565,7568,7688,7830,7832,7835,7838,7842,7843,7845,7847,7855,7870,7886,7896,7899,7902,8017,8022,8024,8035,8043,8045,8046,8061,8063,8072,8194,8211,8218,8230,8234,8235,8238,8243,8245,8250,8256,8262,8402,8403,8405,8407,8409,8410,8418,8433,8443,8520,8528,8538,8541,8550,8631,8633,8640,8645,8647,8653,8655,8658,8662,8665,8667,8671,8673,8682,8683,8713,8717,8723,8726,8730,8762,8768,8780,8786,8788,8794,8806,8808,8812,8814,8816,8821, 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162,286,625,815,1128,1336,1532,2243,2420,2621,2845,3000,3203,3402,3769,3955,4190,4398,4567,4750,5086,5371,5531,5716,5908,6066,6203,6383,6787,6867,7056,7240,7591,7671,8737,9020,9232,9428,9570,9779,9974,10129,10302,10548,10934,11152,11288,11492,11810,12152,12363,12525,12691,12902,13055,13225,13631,13809,13981,14197,14397,14586,14757,14960,15186,15325,15523,16069,16240,16449,16632, 1,9,85,12,65,40,59,40,66,55,1,54,38,30,25,56,39,7,38,92,1,56,1,36,16,8,30,37,1,1,55,46,1,849,1,41,15,6,80,67,34,56,82,118,82,1,67,29,25,45,19,13,75,1,38,57,19,40,89,81,58,45,89,92,7,61,39,5,42,33,49, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,252,0,0,0,0,0,0,0,0,0,243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 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+chr19 47507325 47527172 m84039_230401_034725_s4/174002742/ccs 168,383,729,897,1092,1269,1426,1589,1756,1893,2084,2243,2429,2600,2752,2951,3127,3309,3497,3638,3784,3969,4288,4406,4643,4987,5156,5250,5528,5725,5856,5947,6064,6183,6326,6487,6635,6832,7054,7191,7362,7531,8406,8588,8773,8973,9123,9314,9455,9642,9826,9925,10164,10325,10582,10744,11140,11257,11461,11617,11900,12074,12225,12424,12599,12771,12943,13166,13316,13505,13852,14076,14472,14612,14828,14988,15177,15368,15530,15950,16148,16294,16497,16696,16898,17181,17310,17501,17680,17844,18016,18103,18179,18375,18555,18704,18885,19063,19254,19472, 129,105,126,134,126,146,117,139,136,156,113,109,134,131,109,122,137,97,122,120,184,318,117,218,107,131,93,194,108,116,90,105,94,122,119,115,125,114,102,128,128,111,98,134,128,144,129,109,140,142,98,184,160,237,129,102,116,164,140,259,136,79,166,125,116,138,138,97,94,137,103,93,111,124,95,133,146,111,419,176,119,156,124,116,135,87,124,127,98,147,86,75,143,105,128,164,122,146,151,131, 136,297,488,855,1031,1218,1415,1543,1728,1892,2049,2197,2352,2563,2731,2861,3073,3264,3406,3619,3758,3968,4287,4405,4624,4750,5118,5249,5444,5636,5841,5946,6052,6158,6305,6445,6602,6760,6946,7156,7319,7490,7642,8504,8722,8901,9117,9252,9423,9595,9784,9924,10109,10324,10562,10711,10846,11256,11421,11601,11876,12036,12153,12391,12549,12715,12909,13081,13263,13410,13642,13955,14169,14583,14736,14923,15121,15323,15479,15949,16126,16267,16450,16621,16812,17033,17268,17434,17628,17778,17991,18102,18178,18322,18480,18683,18868,19007,19209,19405,19603, 32,86,241,42,61,51,11,46,28,1,35,46,77,37,21,90,54,45,91,19,26,1,1,1,19,237,38,1,84,89,15,1,12,25,21,42,33,72,108,35,43,41,764,84,51,72,6,62,32,47,42,1,55,1,20,33,294,1,40,16,24,38,72,33,50,56,34,85,53,95,210,121,303,29,92,65,56,45,51,1,22,27,47,75,86,148,42,67,52,66,25,1,1,53,75,21,17,56,45,67,31, 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2,5,6,29,136,139,147,148,151,154,167,297,305,310,314,320,328,332,333,337,341,344,348,360,363,366,373,376,382,488,495,502,512,514,521,529,546,556,608,616,621,667,671,674,676,677,680,684,688,695,700,703,708,720,724,728,855,857,861,863,871,873,887,891,893,896,972,1031,1034,1037,1041,1048,1050,1052,1055,1057,1063,1064,1070,1073,1074,1077,1091,1218,1220,1221,1227,1229,1236,1238,1246,1253,1256,1257,1262,1263,1268,1415,1418,1421,1425,1543,1549,1555,1557,1560,1570,1578,1580,1585,1588,1728,1736,1742,1744,1746,1748,1755,1892,2049,2051,2056,2058,2060,2083,2197,2199,2204,2209,2211,2214,2222,2232,2234,2237,2238,2242,2352,2353,2360,2372,2379,2388,2395,2398,2408,2411,2417,2425,2428,2563,2565,2566,2580,2585,2598,2599,2731,2741,2751,2809,2861,2890,2897,2917,2925,2930,2933,2950,3073,3080,3083,3091,3102,3111,3126,3264,3296,3304,3308,3406,3430,3445,3447,3449,3453,3454,3459,3468,3472,3483,3486,3494,3496,3619,3635,3637,3758,3760,3770,3778,3783,3968,4287,4347,4351,4405,4624,4642,4699,4750,4780,4783,4787,4793,4795,4798,4803,4811,4814,4817,4836,4838,4844,4897,4907,4928,4933,4936,4941,4943,4961,4963,4968,4974,4977,4983,4986,5037,5118,5137,5138,5144,5149,5155,5249,5444,5461,5464,5468,5475,5491,5493,5498,5504,5511,5514,5527,5636,5642,5654,5658,5660,5663,5668,5670,5675,5678,5680,5682,5686,5689,5691,5693,5707,5710,5711,5712,5724,5841,5844,5847,5850,5855,5946,6002,6052,6063,6158,6161,6170,6182,6305,6320,6325,6445,6446,6447,6453,6460,6462,6464,6467,6478,6483,6486,6602,6617,6621,6624,6634,6760,6769,6777,6780,6784,6787,6792,6794,6799,6801,6804,6805,6808,6815,6816,6819,6824,6831,6899,6927,6946,6954,6956,6976,6983,6987,6989,6995,6998,7001,7006,7012,7015,7017,7019,7023,7034,7037,7039,7053,7156,7167,7170,7174,7176,7180,7184,7190,7319,7331,7337,7344,7346,7354,7359,7361,7454,7490,7492,7499,7502,7525,7530,7603,7619,7642,7646,7650,7651,7653,7657,7676,7677,7679,7681,7683,7684,7688,7692,7710,7713,7717,7728,7732,7766,7769,7776,7779,7781,7794,7802,7804,7815,7834,7838,7841,7843,7850,7851,7852,7858,7861,7865,7868,7892,7893,7900,7905,7907,7909,7919,7921,7923,7927,7929,7932,7936,7939,7945,7947,7950,7951,7955,7956,7957,7961,7963,7964,7975,7987,7991,7993,7994,7997,8000,8003,8004,8007,8010,8023,8026,8031,8036,8042,8054,8060,8062,8068,8077,8078,8080,8082,8086,8088,8092,8097,8102,8108,8113,8115,8117,8120,8129,8138,8142,8144,8146,8149,8154,8156,8157,8178,8181,8183,8190,8191,8192,8194,8195,8197,8199,8200,8203,8204,8205,8210,8212,8214,8218,8221,8224,8225,8226,8230,8231,8233,8236,8242,8246,8250,8252,8254,8260,8262,8265,8268,8269,8271,8274,8276,8281,8283,8288,8291,8293,8295,8297,8299,8302,8303,8309,8314,8316,8319,8320,8322,8330,8349,8352,8364,8368,8372,8374,8379,8384,8388,8399,8405,8504,8506,8520,8523,8524,8526,8528,8535,8537,8539,8541,8544,8546,8556,8566,8569,8577,8585,8587,8722,8725,8728,8733,8738,8740,8743,8744,8749,8756,8759,8765,8767,8772,8901,8914,8916,8918,8928,8930,8932,8938,8942,8945,8947,8950,8953,8956,8964,8972,9117,9122,9252,9255,9257,9259,9262,9263,9266,9282,9290,9292,9293,9297,9299,9301,9304,9305,9308,9312,9313,9423,9434,9447,9453,9454,9527,9595,9598,9601,9604,9609,9614,9623,9625,9628,9634,9640,9641,9784,9786,9791,9793,9796,9806,9808,9809,9811,9825,9924,9983,10109,10118,10163,10324,10562,10566,10581,10621,10711,10717,10724,10743,10846,10849,10851,10865,10867,10877,10882,10883,10887,10889,10896,10897,10903,10908,10911,10927,10936,10938,10941,10944,10965,10968,10972,10996,10999,11006,11017,11021,11024,11025,11030,11032,11033,11038,11044,11049,11051,11053,11055,11063,11065,11067,11078,11079,11081,11083,11090,11096,11097,11098,11099,11101,11112,11115,11122,11124,11139,11256,11421,11425,11429,11432,11436,11441,11445,11446,11448,11460,11601,11616,11876,11880,11890,11899,12036,12039,12047,12048,12050,12052,12055,12056,12057,12060,12061,12063,12066,12069,12073,12153,12160,12200,12211,12213,12217,12224,12290,12353,12360,12391,12392,12397,12399,12409,12423,12549,12551,12553,12563,12566,12567,12575,12578,12598,12715,12721,12726,12736,12741,12745,12752,12760,12770,12882,12909,12912,12915,12942,13081,13082,13085,13088,13094,13097,13099,13103,13107,13109,13112,13115,13123,13135,13140,13165,13263,13265,13270,13272,13274,13277,13280,13287,13293,13296,13301,13302,13307,13315,13410,13418,13452,13462,13474,13478,13480,13484,13486,13491,13492,13504,13642,13644,13646,13650,13658,13668,13672,13675,13678,13694,13704,13774,13779,13781,13785,13802,13807,13821,13824,13826,13832,13833,13837,13840,13846,13851,13955,13975,13981,14010,14011,14013,14018,14023,14024,14026,14033,14035,14039,14041,14046,14051,14059,14064,14068,14071,14075,14169,14175,14180,14209,14213,14216,14217,14224,14227,14230,14232,14235,14236,14241,14245,14249,14252,14257,14262,14268,14273,14275,14276,14280,14283,14293,14295,14316,14349,14366,14368,14376,14379,14386,14393,14395,14398,14401,14404,14411,14412,14416,14418,14421,14424,14434,14436,14438,14443,14450,14451,14456,14462,14465,14471,14583,14593,14597,14609,14611,14736,14748,14760,14762,14778,14780,14783,14785,14787,14790,14794,14798,14803,14806,14811,14812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+chr19 47507405 47523090 m54329U_210326_192251/77267415/ccs 100,298,424,650,922,1079,1220,1416,1551,1740,2063,2249,2441,2618,2792,2990,3136,3294,3465,3624,3808,3965,4144,4321,4461,4635,4782,4939,5060,5232,5479,5610,5796,5930,6114,6248,6408,6565,6778,6938,7061,7244,7454,8314,8491,8635,8776,8894,9038,9198,9365,9510,9679,9811,10043,10212,10362,10527,10791,11071,11359,11724,11947,12104,12263,12376,12534,12729,12969,13108,13280,13451,13602,13784,14014,14346,14501,14649,14829,15062,15202,15386, 106,121,136,221,127,130,141,134,148,302,132,140,112,145,119,115,147,158,124,138,120,121,150,130,150,146,134,120,140,122,80,137,129,154,113,126,107,110,83,112,117,111,80,83,114,104,117,143,129,114,129,123,130,144,105,120,105,118,164,119,244,113,88,76,112,148,110,137,92,140,133,134,99,92,90,116,99,96,115,112,124,101, 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+chr19 47507794 47513324 m84039_230404_003541_s3/99686134/ccs 107,326,522,708,927,1114,1488,1663,1770,1904,2063,2283,2478,2856,3071,3254,3455,3630,3893,4104,4331,4528,4776,4946,5245, 182,127,185,216,138,349,174,106,83,141,196,176,377,214,168,188,149,174,162,174,169,167,148,277,185, 85,289,453,707,924,1065,1463,1662,1769,1853,2045,2259,2459,2855,3070,3239,3442,3604,3804,4055,4278,4500,4695,4924,5223, 22,37,69,1,3,49,25,1,1,51,18,24,19,1,1,15,13,26,89,49,53,28,81,22,22, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 0,1,5,85,88,93,106,289,294,325,453,467,492,509,521,707,924,926,1065,1109,1113,1463,1476,1478,1487,1662,1688,1696,1769,1853,1871,1874,1883,1884,1891,1894,1899,1903,2045,2048,2057,2062,2259,2264,2282,2459,2467,2477,2855,3070,3239,3253,3442,3454,3604,3624,3629,3804,3811,3824,3837,3850,3853,3855,3871,3872,3874,3886,3892,4055,4067,4070,4081,4095,4098,4103,4278,4282,4283,4286,4289,4290,4296,4307,4309,4312,4315,4325,4330,4451,4500,4506,4509,4527,4695,4702,4705,4709,4713,4716,4718,4722,4775,4924,4928,4945,5223,5225,5241,5244,5430,5433,5443,5445,5519,5520,5522, +chr19 47507921 47523781 m84039_230404_003541_s3/109972366/ccs 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+chr19 47508710 47528217 m54329U_210810_004956/105973473/ccs 77,264,457,784,979,1158,1360,1531,1828,2173,2341,2514,2715,2912,3125,3283,3465,3623,3831,3967,4127,4335,4495,4637,4856,5061,5269,5406,5568,5781,5984,6117,7024,7263,7484,7652,7797,7956,8138,8271,8480,8691,8917,9371,9772,9953,10088,10266,10450,10752,10940,11118,11284,11674,11808,12016,12231,12421,12625,12809,12986,13185,13350,13518,13730,13894,14209,14355,14581,14767,14885,15129,15328,15484,15711,15891,16113,16323,16524,16879,17099,17264,17442,17636,17806,18002,18196,18408,18583,18809,18983,19153, 146,140,318,136,148,130,148,296,305,152,140,142,137,146,132,127,127,134,129,140,131,130,141,159,128,118,109,144,160,134,132,128,125,158,126,117,137,152,116,144,138,119,391,104,126,134,176,151,272,144,142,143,314,115,171,148,172,146,138,122,138,145,138,158,108,262,145,148,185,98,169,136,134,173,157,136,128,162,354,186,164,177,193,169,191,193,145,147,147,145,160,170, 223,404,775,920,1127,1288,1508,1827,2133,2325,2481,2656,2852,3058,3257,3410,3592,3757,3960,4107,4258,4465,4636,4796,4984,5179,5378,5550,5728,5915,6116,6245,7149,7421,7610,7769,7934,8108,8254,8415,8618,8810,9308,9475,9898,10087,10264,10417,10722,10896,11082,11261,11598,11789,11979,12164,12403,12567,12763,12931,13124,13330,13488,13676,13838,14156,14354,14503,14766,14865,15054,15265,15462,15657,15868,16027,16241,16485,16878,17065,17263,17441,17635,17805,17997,18195,18341,18555,18730,18954,19143,19323, 41,53,9,59,31,72,23,1,40,16,33,59,60,67,26,55,31,74,7,20,77,30,1,60,77,90,28,18,53,69,1,779,114,63,42,28,22,30,17,65,73,107,63,297,55,1,2,33,30,44,36,23,76,19,37,67,18,58,46,55,61,20,30,54,56,53,1,78,1,20,75,63,22,54,23,86,82,39,1,34,1,1,1,1,5,1,67,28,79,29,10,1, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,251,0,0,0,0,0,0,0,0,0,0,0,251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 28,33,36,39,43,45,48,52,56,59,61,63,68,69,76,137,223,227,231,236,238,242,243,245,247,251,254,262,263,404,406,415,418,420,426,428,431,436,438,446,449,456,775,778,783,920,921,930,935,936,940,955,958,978,1127,1132,1138,1143,1144,1149,1157,1183,1288,1299,1303,1311,1318,1320,1322,1328,1330,1337,1340,1346,1349,1351,1353,1359,1508,1530,1827,2133,2136,2148,2157,2158,2160,2169,2172,2325,2326,2331,2336,2340,2481,2488,2492,2506,2510,2513,2656,2669,2671,2681,2683,2685,2691,2695,2697,2700,2714,2852,2857,2861,2862,2865,2867,2874,2877,2880,2891,2894,2895,2898,2900,2911,3058,3061,3064,3067,3070,3073,3077,3083,3088,3092,3096,3098,3102,3106,3109,3124,3257,3267,3273,3282,3410,3412,3414,3417,3422,3425,3430,3432,3436,3443,3447,3455,3457,3464,3592,3615,3618,3622,3757,3758,3770,3775,3783,3785,3790,3793,3797,3800,3801,3804,3806,3808,3810,3821,3830,3960,3962,3964,3966,4107,4112,4113,4115,4126,4258,4264,4267,4271,4276,4280,4282,4285,4292,4297,4300,4302,4306,4308,4311,4313,4315,4319,4324,4326,4329,4332,4333,4334,4465,4494,4636,4796,4798,4804,4810,4812,4813,4817,4823,4824,4828,4831,4843,4846,4847,4850,4853,4855,4984,5008,5010,5012,5018,5020,5022,5024,5028,5030,5033,5041,5057,5060,5179,5197,5200,5210,5216,5228,5238,5262,5268,5378,5383,5386,5400,5405,5515,5550,5558,5562,5567,5728,5730,5733,5736,5740,5743,5745,5753,5757,5761,5775,5780,5915,5922,5928,5930,5933,5937,5943,5944,5955,5959,5961,5968,5970,5974,5978,5983,6116,6245,6258,6260,6264,6266,6270,6274,6275,6277,6279,6281,6300,6301,6303,6305,6307,6308,6312,6316,6318,6327,6331,6334,6337,6341,6352,6356,6357,6393,6400,6405,6426,6428,6439,6448,6458,6460,6462,6465,6467,6475,6476,6477,6483,6485,6486,6488,6493,6517,6518,6525,6528,6530,6532,6534,6539,6544,6546,6548,6549,6552,6554,6557,6561,6564,6566,6573,6576,6577,6581,6582,6583,6587,6589,6590,6613,6617,6619,6623,6626,6629,6630,6633,6636,6639,6643,6644,6646,6649,6652,6657,6662,6668,6681,6687,6689,6695,6704,6705,6707,6709,6713,6715,6717,6719,6722,6724,6731,6737,6765,6769,6771,6773,6774,6776,6781,6783,6784,6787,6788,6790,6805,6808,6810,6817,6819,6821,6824,6826,6830,6831,6832,6837,6838,6839,6841,6845,6848,6851,6852,6853,6857,6860,6863,6890,6895,6908,6910,6915,6917,6918,6920,6922,6924,6930,6931,6933,6937,6944,6947,6950,6952,6956,6958,6961,6963,6965,6977,6979,6980,6992,6996,7000,7001,7007,7012,7016,7019,7023,7149,7152,7153,7155,7157,7160,7166,7168,7170,7173,7175,7176,7177,7181,7195,7198,7206,7214,7216,7217,7220,7224,7226,7229,7231,7234,7238,7244,7246,7250,7252,7254,7256,7260,7262,7295,7388,7421,7424,7425,7429,7431,7433,7435,7437,7439,7453,7454,7455,7460,7474,7477,7479,7483,7610,7617,7621,7629,7635,7651,7696,7769,7776,7779,7784,7790,7792,7794,7796,7934,7938,7952,7955,8108,8111,8113,8119,8124,8131,8134,8137,8254,8257,8263,8270,8415,8420,8422,8425,8429,8435,8438,8440,8444,8446,8448,8450,8452,8454,8467,8469,8471,8476,8479,8618,8628,8632,8635,8641,8643,8647,8649,8656,8659,8660,8662,8665,8667,8670,8683,8690,8810,8819,8822,8824,8829,8831,8835,8839,8841,8843,8847,8849,8853,8857,8859,8861,8865,8867,8869,8871,8874,8875,8877,8916,9308,9328,9331,9333,9336,9337,9341,9345,9347,9350,9354,9357,9358,9361,9370,9475,9481,9485,9492,9495,9499,9503,9505,9507,9514,9517,9519,9526,9527,9531,9533,9538,9541,9542,9546,9548,9549,9551,9552,9556,9557,9563,9564,9566,9568,9570,9571,9573,9574,9575,9577,9578,9580,9581,9582,9583,9585,9587,9588,9592,9595,9598,9601,9602,9604,9607,9610,9615,9617,9619,9629,9631,9633,9636,9639,9645,9647,9651,9654,9663,9674,9681,9683,9685,9689,9692,9693,9695,9697,9698,9699,9701,9704,9705,9708,9709,9711,9713,9714,9715,9717,9720,9722,9726,9727,9729,9731,9737,9742,9744,9745,9748,9752,9762,9769,9771,9898,9952,10059,10087,10264,10265,10417,10422,10424,10426,10431,10433,10449,10722,10731,10737,10744,10751,10896,10905,10909,10914,10920,10923,10925,10928,10932,10935,10936,10939,11082,11085,11089,11096,11100,11111,11113,11117,11261,11265,11270,11273,11275,11283,11598,11604,11610,11612,11615,11616,11627,11630,11631,11633,11637,11639,11641,11644,11646,11663,11668,11673,11789,11792,11794,11802,11804,11807,11979,11996,12015,12164,12166,12168,12172,12173,12178,12183,12186,12188,12190,12195,12196,12198,12205,12213,12215,12230,12403,12405,12410,12412,12416,12420,12567,12576,12583,12586,12592,12594,12597,12598,12603,12606,12612,12624,12763,12775,12777,12781,12783,12786,12787,12800,12806,12808,12931,12956,12966,12975,12978,12980,12985,13124,13126,13163,13169,13184,13330,13334,13336,13338,13340,13343,13349,13488,13491,13514,13517,13676,13679,13680,13682,13684,13688,13690,13692,13698,13699,13704,13712,13714,13717,13723,13729,13838,13859,13865,13873,13878,13886,13893,14156,14159,14184,14187,14191,14196,14208,14354,14503,14505,14515,14527,14531,14534,14536,14542,14547,14580,14766,14865,14881,14884,15054,15060,15068,15071,15073,15076,15079,15082,15084,15086,15090,15095,15097,15100,15107,15110,15115,15117,15120,15124,15128,15161,15265,15267,15272,15280,15283,15286,15292,15298,15301,15302,15304,15306,15312,15327,15462,15464,15466,15478,15483,15657,15665,15680,15681,15685,15687,15688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+chr19 47509060 47513962 m84039_230401_031619_s3/221582713/ccs 176,329,461,661,798,956,1089,1486,1628,1818,2001,2169,2340,2519,2747,3295,3412,3714,3893,4095,4280,4408, 133,131,129,109,118,119,123,76,110,83,109,115,118,100,116,83,212,108,111,100,109,106, 137,309,460,590,770,916,1075,1212,1562,1738,1901,2110,2284,2458,2619,2863,3378,3624,3822,4004,4195,4389,4514, 39,20,1,71,28,40,14,274,66,80,100,59,56,61,128,432,34,90,71,91,85,19,244, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 0,2,3,5,137,146,155,158,159,161,175,309,315,317,320,326,328,460,590,593,602,622,624,634,638,645,657,659,660,770,774,786,792,797,916,925,935,947,953,955,1075,1080,1088,1127,1212,1216,1267,1306,1308,1324,1336,1339,1346,1347,1349,1353,1357,1368,1375,1433,1461,1465,1466,1468,1485,1562,1578,1579,1580,1582,1585,1589,1590,1592,1595,1604,1608,1609,1611,1613,1621,1627,1677,1738,1740,1749,1752,1757,1758,1760,1762,1766,1768,1770,1771,1772,1775,1776,1779,1781,1784,1786,1787,1789,1793,1796,1805,1808,1811,1817,1901,1912,1914,1922,1923,1925,1928,1933,1937,1938,1974,1979,1980,1984,1991,1998,2000,2110,2114,2115,2117,2132,2143,2144,2154,2168,2284,2289,2300,2305,2308,2312,2317,2319,2324,2329,2333,2336,2339,2458,2460,2471,2474,2475,2476,2481,2484,2487,2488,2491,2495,2497,2500,2518,2619,2621,2627,2639,2644,2645,2647,2649,2671,2682,2683,2684,2686,2718,2719,2725,2740,2742,2746,2798,2841,2863,2872,2878,2882,2888,2891,2909,2912,2945,2947,2976,2979,2992,2996,2998,3000,3001,3005,3007,3008,3011,3017,3018,3021,3024,3028,3031,3034,3035,3039,3054,3075,3103,3105,3148,3150,3152,3157,3161,3163,3164,3167,3172,3174,3178,3179,3181,3182,3184,3186,3188,3189,3192,3195,3196,3200,3203,3207,3208,3210,3213,3217,3228,3230,3235,3238,3239,3241,3244,3249,3250,3253,3254,3262,3265,3269,3272,3290,3293,3294,3378,3380,3382,3385,3387,3388,3391,3394,3398,3399,3404,3405,3407,3411,3624,3657,3659,3662,3663,3665,3673,3674,3676,3677,3678,3680,3683,3685,3688,3692,3694,3695,3700,3701,3703,3704,3706,3707,3710,3712,3713,3733,3791,3822,3824,3828,3832,3835,3836,3839,3841,3843,3845,3847,3848,3852,3853,3858,3864,3867,3871,3872,3873,3879,3880,3882,3885,3889,3890,3892,4004,4006,4007,4010,4015,4016,4018,4022,4023,4024,4029,4032,4036,4037,4039,4042,4044,4046,4047,4051,4054,4057,4061,4063,4066,4075,4081,4083,4087,4088,4090,4093,4094,4195,4197,4199,4203,4205,4208,4210,4215,4219,4221,4224,4226,4231,4238,4241,4244,4247,4248,4254,4255,4257,4260,4262,4264,4271,4279,4340,4389,4405,4407,4514,4518,4519,4522,4524,4530,4531,4535,4538,4540,4541,4543,4545,4547,4551,4552,4554,4556,4558,4562,4567,4568,4569,4570,4574,4575,4579,4581,4582,4584,4586,4589,4590,4592,4594,4596,4598,4601,4614,4617,4620,4622,4667,4675,4677,4699,4700,4704,4707,4714,4722,4726,4729,4731,4733,4736,4740,4742,4743,4747,4752,4755,4757,4881,4884,4886,4889,4890,4892,4895, +chr19 47509233 47523608 m54329U_210326_192251/88801936/ccs 146,311,615,818,989,1192,1394,1569,1760,1918,2116,2292,2432,2629,2841,3020,3183,3356,3541,3760,3954,4095,4316,4450,4632,4758,4915,5106,5318,5398,5615,6433,6597,6764,6946,7069,7215,7367,7532,7709,7871,8027,8417,8738,9061,9235,9458,9608,9936,10114,10309,10454,10691,10860,11028,11208,11434,11595,11775,11995,12177,12360,12552,12757,12952,13138,13367,13516,13671,13811, 100,286,140,146,140,134,138,164,138,129,136,116,157,146,115,136,129,143,129,128,98,157,111,163,115,133,134,106,79,216,103,158,155,127,122,134,127,141,157,123,121,389,293,275,147,222,77,309,146,125,139,185,120,152,148,138,139,129,153,145,127,138,152,145,151,144,90,147,139,138, 246,597,755,964,1129,1326,1532,1733,1898,2047,2252,2408,2589,2775,2956,3156,3312,3499,3670,3888,4052,4252,4427,4613,4747,4891,5049,5212,5397,5614,5718,6591,6752,6891,7068,7203,7342,7508,7689,7832,7992,8416,8710,9013,9208,9457,9535,9917,10082,10239,10448,10639,10811,11012,11176,11346,11573,11724,11928,12140,12304,12498,12704,12902,13103,13282,13457,13663,13810,13949, 65,18,63,25,63,68,37,27,20,69,40,24,40,66,64,27,44,42,90,66,43,64,23,19,11,24,57,106,1,1,715,6,12,55,1,12,25,24,20,39,35,1,28,48,27,1,73,19,32,70,6,52,49,16,32,88,22,51,67,37,56,54,53,50,35,85,59,8,1,34, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,243,0,0,251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,243,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 145,246,271,276,282,285,287,289,292,297,299,302,310,597,609,614,755,759,770,774,782,789,792,793,797,799,801,806,817,964,971,974,988,1129,1131,1135,1139,1142,1144,1147,1150,1152,1159,1162,1164,1170,1176,1191,1326,1330,1332,1333,1335,1338,1350,1353,1354,1358,1383,1385,1393,1532,1540,1541,1546,1547,1549,1559,1561,1563,1565,1568,1733,1759,1898,1904,1907,1908,1911,1917,2047,2050,2053,2060,2064,2069,2071,2075,2077,2080,2084,2087,2091,2115,2252,2255,2257,2264,2268,2275,2291,2408,2422,2431,2589,2608,2614,2616,2620,2623,2628,2775,2795,2798,2809,2811,2815,2817,2819,2824,2840,2956,2958,2960,2962,2963,2967,2969,2976,2980,2983,3001,3003,3011,3014,3015,3019,3156,3159,3182,3312,3316,3318,3322,3326,3329,3330,3332,3336,3349,3352,3355,3499,3516,3517,3519,3520,3522,3525,3528,3529,3537,3540,3670,3676,3679,3691,3697,3701,3704,3707,3709,3712,3717,3719,3723,3726,3735,3739,3741,3744,3751,3756,3759,3888,3896,3900,3901,3903,3906,3907,3909,3911,3916,3918,3922,3924,3925,3928,3931,3933,3947,3949,3953,4052,4065,4073,4075,4082,4086,4092,4094,4252,4256,4258,4262,4264,4270,4272,4273,4277,4299,4310,4315,4427,4430,4437,4440,4443,4444,4449,4613,4615,4623,4627,4629,4631,4747,4757,4891,4902,4907,4909,4914,5049,5058,5065,5069,5070,5071,5072,5075,5077,5080,5083,5101,5105,5212,5216,5220,5227,5234,5239,5242,5243,5247,5248,5250,5256,5257,5259,5263,5267,5270,5273,5274,5276,5288,5293,5295,5297,5304,5314,5317,5397,5614,5718,5720,5727,5731,5735,5736,5738,5740,5742,5748,5761,5762,5764,5766,5768,5769,5773,5779,5788,5792,5795,5798,5802,5813,5817,5818,5825,5828,5829,5832,5835,5837,5839,5845,5850,5851,5854,5861,5864,5865,5866,5880,5888,5890,5898,5901,5920,5922,5924,5927,5929,5937,5938,5945,5948,5950,5954,5961,5962,5967,5969,5978,5979,5986,5989,5991,5993,5995,6002,6007,6009,6011,6012,6015,6017,6020,6027,6029,6033,6035,6038,6039,6043,6044,6045,6049,6051,6052,6076,6080,6082,6083,6086,6089,6092,6093,6096,6099,6102,6105,6106,6107,6109,6112,6115,6120,6125,6131,6143,6149,6151,6157,6167,6168,6170,6172,6176,6178,6180,6182,6185,6187,6192,6194,6196,6198,6200,6203,6205,6210,6231,6233,6235,6236,6238,6243,6245,6246,6267,6270,6272,6283,6285,6287,6288,6290,6296,6298,6303,6305,6307,6311,6313,6314,6317,6318,6319,6323,6324,6326,6329,6361,6362,6375,6377,6384,6385,6387,6389,6391,6393,6398,6406,6414,6417,6432,6557,6591,6593,6596,6752,6753,6755,6757,6761,6763,6891,6897,6919,6926,6928,6929,6932,6934,6937,6940,6943,6945,7068,7167,7203,7210,7214,7342,7344,7347,7351,7352,7354,7355,7360,7361,7364,7366,7508,7516,7518,7520,7526,7527,7531,7689,7692,7695,7698,7708,7832,7835,7845,7848,7851,7854,7857,7858,7861,7863,7865,7870,7992,7998,8006,8014,8018,8022,8023,8026,8416,8710,8713,8737,9013,9018,9019,9025,9026,9028,9030,9032,9033,9037,9042,9044,9047,9049,9054,9057,9060,9208,9211,9214,9215,9217,9219,9234,9457,9535,9549,9552,9556,9558,9583,9585,9598,9607,9917,9923,9925,9929,9935,10082,10104,10107,10113,10239,10246,10253,10257,10261,10264,10268,10270,10274,10277,10279,10283,10285,10289,10291,10292,10299,10300,10305,10308,10448,10453,10639,10645,10649,10652,10661,10663,10664,10681,10690,10811,10831,10835,10838,10843,10853,10854,10856,10859,11012,11018,11027,11176,11179,11183,11191,11193,11199,11205,11207,11346,11348,11355,11360,11363,11370,11373,11376,11379,11384,11385,11399,11402,11403,11406,11407,11412,11416,11417,11419,11421,11423,11425,11427,11430,11433,11573,11574,11586,11594,11724,11738,11741,11743,11745,11748,11755,11758,11761,11774,11928,11930,11933,11940,11941,11942,11946,11952,11956,11961,11963,11965,11968,11970,11973,11983,11985,11990,11994,12140,12145,12149,12156,12160,12161,12165,12176,12304,12312,12315,12319,12321,12336,12340,12353,12359,12498,12501,12504,12518,12523,12527,12533,12542,12545,12551,12704,12708,12712,12720,12731,12737,12749,12756,12902,12905,12921,12925,12931,12932,12936,12951,13103,13105,13109,13116,13137,13282,13285,13299,13303,13306,13309,13312,13317,13326,13332,13334,13337,13341,13347,13349,13354,13356,13361,13362,13364,13366,13457,13466,13473,13477,13503,13507,13509,13515,13634,13663,13666,13668,13670,13810,13847,13879,13885,13949,13951,13961,13967,13968,13977,13980,13982,14301,14305,14307,14309,14310,14313,14323,14325,14328,14331,14334, +chr19 47509612 47524347 m84039_230401_034725_s4/123339260/ccs 74,581,769,1706,2204,2754,3393,3528,3724,4169,4523,4852,5213,5517,5650,6473,7304,7648,8226,9139,9558,10021,10888,11185,11596,12077,12246,12603,12822,13218,13384,13562,13744,14181,14305, 506,187,936,497,490,638,134,155,444,339,328,312,285,132,822,776,343,577,912,418,454,866,200,410,480,168,356,218,395,165,108,181,436,123,231, 580,768,1705,2203,2694,3392,3527,3683,4168,4508,4851,5164,5498,5649,6472,7249,7647,8225,9138,9557,10012,10887,11088,11595,12076,12245,12602,12821,13217,13383,13492,13743,14180,14304,14536, 1,1,1,1,60,1,1,41,1,15,1,49,19,1,1,55,1,1,1,1,9,1,97,1,1,1,1,1,1,1,70,1,1,1,1, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 0,1,5,6,73,580,768,1705,2203,2694,2722,2725,2753,3392,3527,3683,3723,4168,4508,4522,4851,5164,5212,5498,5516,5606,5649,6472,7249,7302,7303,7647,8225,9138,9557,10012,10020,10887,11088,11129,11184,11595,12076,12173,12245,12602,12821,13217,13383,13492,13498,13561,13675,13743,14180,14224,14304,14536,14723,14725,14727, +chr19 47509937 47521574 m54329U_210323_190418/72353082/ccs 121,302,506,698,895,1120,1292,1382,1538,1736,1907,2107,2281,2463,2753,3219,3399,3588,3764,3900,4179,4580,4743,4912,5799,6021,6325,6507,6689,6862,7042,7329,7515,7683,8084,8292,8500,8699,9194,9395,9586,9906,10088,10275,10452,10588,10784,10961,11166,11365, 158,149,185,174,200,151,89,86,155,152,186,122,161,285,465,179,188,130,135,278,269,134,127,129,136,260,133,179,165,140,282,182,167,362,201,151,198,481,192,109,297,161,174,147,135,195,174,147,141,140, 82,279,451,691,872,1095,1271,1381,1468,1693,1888,2093,2229,2442,2748,3218,3398,3587,3718,3899,4178,4448,4714,4870,5041,5935,6281,6458,6686,6854,7002,7324,7511,7682,8045,8285,8443,8698,9180,9386,9504,9883,10067,10262,10422,10587,10783,10958,11108,11307,11505, 39,23,55,7,23,25,21,1,70,43,19,14,52,21,5,1,1,1,46,1,1,132,29,42,758,86,44,49,3,8,40,5,4,1,39,7,57,1,14,9,82,23,21,13,30,1,1,3,58,58,46, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,250,0,0,251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 81,85,89,96,112,120,279,280,285,292,294,301,451,454,463,469,475,476,479,482,499,505,691,693,697,769,872,889,890,892,894,1095,1097,1099,1101,1105,1119,1230,1271,1285,1289,1291,1381,1468,1471,1477,1480,1483,1486,1491,1496,1500,1506,1507,1511,1515,1517,1518,1531,1536,1537,1693,1697,1700,1703,1707,1709,1713,1720,1735,1775,1888,1892,1895,1906,2093,2106,2229,2234,2242,2244,2250,2253,2254,2275,2280,2323,2442,2449,2454,2456,2460,2462,2748,2750,2752,3218,3338,3398,3587,3718,3733,3736,3740,3742,3745,3763,3899,4178,4448,4453,4456,4458,4464,4472,4475,4486,4488,4495,4496,4497,4499,4501,4509,4511,4518,4519,4521,4526,4528,4531,4539,4541,4544,4552,4556,4567,4574,4579,4607,4714,4717,4721,4725,4727,4729,4732,4742,4870,4876,4911,5010,5041,5047,5060,5062,5066,5068,5072,5077,5079,5083,5089,5102,5103,5105,5107,5109,5110,5115,5118,5119,5130,5134,5135,5137,5138,5141,5145,5156,5160,5161,5188,5197,5205,5231,5233,5242,5245,5254,5264,5266,5271,5273,5280,5281,5282,5288,5298,5322,5323,5330,5335,5338,5340,5345,5350,5352,5355,5360,5366,5371,5375,5377,5380,5381,5385,5386,5387,5392,5395,5407,5423,5425,5429,5432,5436,5439,5442,5449,5450,5452,5455,5458,5463,5468,5474,5486,5501,5511,5512,5514,5516,5522,5524,5526,5529,5554,5563,5574,5576,5578,5588,5590,5591,5593,5614,5616,5623,5625,5627,5628,5632,5636,5638,5643,5644,5645,5647,5654,5659,5663,5666,5714,5723,5724,5726,5728,5730,5745,5747,5750,5762,5764,5767,5771,5783,5788,5798,5935,5939,5941,5958,5970,6020,6281,6296,6324,6458,6481,6506,6686,6688,6814,6854,6861,7002,7008,7010,7013,7025,7030,7031,7035,7041,7324,7328,7511,7514,7682,8045,8049,8051,8064,8067,8072,8080,8083,8285,8291,8443,8445,8461,8468,8469,8471,8474,8476,8477,8482,8493,8499,8698,9180,9182,9185,9193,9386,9394,9504,9527,9561,9566,9585,9883,9886,9888,9892,9893,9895,9898,9901,9905,10067,10075,10082,10087,10262,10266,10274,10422,10427,10428,10433,10451,10587,10783,10958,10960,11108,11110,11115,11122,11125,11133,11139,11141,11151,11165,11307,11335,11340,11352,11357,11364,11505,11517,11524,11525,11529,11540,11550, +chr19 47510024 47533653 m54329U_210326_192251/104792639/ccs 158,402,565,754,942,1140,1346,1511,1716,1875,2018,2165,2381,2544,2750,2924,3108,3258,3444,3627,3798,3962,4168,4320,4459,4646,4818,5654,5736,5919,6166,6388,6651,6906,7084,7245,7409,7567,7707,7902,8467,8576,8782,8923,9091,9271,9389,9585,9852,10007,10188,10340,10544,10712,10901,11057,11293,11445,11693,11876,12035,12252,12429,12734,12897,13378,13578,13760,13951,14163,14383,14582,14791,14962,15192,15346,15515,15686,15903,16038,16259,16445,16629,16817,16972,17196,17389,17552,17719,17879,18098,18296,18430,18634,18873,19090,19269,19414,19605,19760,19954,20201,20361,20559,20739,20902,21127,21333,21552,21754,21938,22157,22354,22536,22720,22920,23117,23281,23449, 131,100,138,109,131,128,112,100,96,81,127,105,111,146,135,146,112,128,136,141,131,123,121,121,140,111,100,81,173,134,113,181,134,123,122,116,86,128,132,269,108,166,140,138,130,114,144,223,125,174,121,145,129,158,139,115,115,132,118,117,151,130,257,145,475,122,136,148,161,167,128,141,123,156,104,162,148,139,134,182,139,150,175,150,169,150,157,162,127,135,139,97,122,140,133,118,124,131,126,116,115,156,157,134,156,162,145,147,146,119,141,130,134,138,136,129,150,159,140, 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+chr19 47510045 47522679 m84039_230404_003541_s3/205851410/ccs 80,263,443,655,827,1034,1452,1660,1810,1992,2168,2382,2871,3034,3163,3448,3600,3773,3962,4171,4548,4673,4789,5588,5791,5982,6178,6365,6687,6860,7331,7538,7865,8031,8383,8518,8656,8785,9153,9360,9578,9736,9929,10328,10532,10746,10969,11156,11358,11603,11769,12008,12240, 119,157,140,91,159,161,140,149,181,118,133,171,99,107,165,125,132,110,133,229,84,105,118,124,159,149,123,288,136,407,153,266,136,142,134,137,128,327,113,111,112,132,291,128,159,152,109,130,144,111,144,83,111, 199,420,583,746,986,1195,1592,1809,1991,2110,2301,2553,2970,3141,3328,3573,3732,3883,4095,4400,4632,4778,4907,5712,5950,6131,6301,6653,6823,7267,7484,7804,8001,8173,8517,8655,8784,9112,9266,9471,9690,9868,10220,10456,10691,10898,11078,11286,11502,11714,11913,12091,12351, 64,23,72,81,48,257,68,1,1,58,81,318,64,22,120,27,41,79,76,148,41,11,681,79,32,47,64,34,37,64,54,61,30,210,1,1,1,41,94,107,46,61,108,76,55,71,78,72,101,55,95,149,83, 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4,6,13,26,28,36,38,39,53,67,79,199,204,262,420,424,428,429,432,435,439,442,583,591,603,610,611,613,625,629,630,632,634,654,746,763,800,802,805,817,826,986,994,995,1000,1001,1005,1009,1012,1021,1023,1033,1195,1202,1207,1209,1210,1214,1216,1219,1222,1225,1229,1231,1233,1236,1249,1255,1279,1282,1297,1305,1310,1380,1385,1388,1403,1406,1411,1413,1416,1419,1451,1592,1594,1607,1610,1614,1626,1629,1639,1641,1647,1659,1778,1809,1991,2110,2122,2143,2160,2165,2167,2212,2301,2313,2317,2320,2321,2324,2326,2328,2331,2339,2341,2356,2359,2370,2378,2381,2553,2556,2580,2586,2587,2589,2594,2597,2616,2624,2626,2628,2630,2633,2637,2641,2661,2664,2666,2671,2676,2680,2697,2702,2705,2709,2711,2712,2717,2718,2720,2721,2723,2724,2726,2727,2737,2741,2744,2754,2763,2764,2771,2777,2779,2784,2790,2792,2796,2797,2800,2802,2804,2810,2812,2817,2819,2822,2823,2826,2828,2835,2839,2841,2845,2849,2860,2862,2869,2870,2970,2973,2975,2977,2990,2993,2996,2997,2998,3002,3007,3010,3012,3033,3083,3129,3141,3148,3152,3154,3155,3158,3161,3162,3328,3332,3338,3340,3342,3347,3349,3352,3357,3361,3363,3365,3370,3372,3384,3391,3392,3395,3404,3406,3407,3409,3418,3422,3424,3447,3573,3575,3579,3592,3596,3599,3732,3733,3739,3743,3746,3748,3750,3753,3757,3769,3772,3883,3892,3926,3929,3936,3944,3952,3955,3961,4095,4102,4106,4113,4116,4118,4127,4134,4142,4149,4152,4170,4400,4415,4444,4452,4453,4455,4458,4461,4462,4464,4468,4472,4475,4478,4481,4493,4498,4500,4502,4503,4509,4513,4518,4519,4522,4527,4530,4536,4538,4543,4547,4632,4649,4663,4666,4671,4672,4778,4780,4788,4907,4909,4924,4928,4934,4939,4945,4964,4965,4967,4969,4971,4972,4980,4982,4991,4995,4998,5001,5005,5016,5020,5021,5028,5031,5035,5038,5042,5048,5054,5057,5064,5067,5069,5082,5090,5092,5100,5103,5112,5122,5124,5126,5129,5131,5138,5146,5149,5151,5153,5163,5164,5169,5171,5180,5188,5193,5195,5197,5207,5209,5211,5212,5215,5220,5227,5229,5233,5235,5238,5239,5243,5244,5245,5249,5251,5252,5275,5279,5281,5285,5288,5291,5292,5295,5298,5306,5308,5311,5314,5324,5330,5342,5348,5350,5356,5365,5366,5368,5370,5374,5376,5378,5380,5383,5385,5390,5392,5394,5398,5401,5403,5405,5408,5430,5432,5434,5435,5437,5442,5445,5449,5451,5466,5469,5471,5482,5485,5487,5493,5498,5500,5502,5509,5512,5513,5514,5518,5521,5569,5571,5576,5579,5581,5583,5585,5587,5712,5717,5718,5728,5731,5741,5744,5749,5751,5758,5761,5779,5787,5790,5950,5952,5956,5974,5981,6131,6134,6137,6175,6177,6301,6308,6311,6358,6364,6653,6656,6659,6660,6668,6674,6676,6680,6682,6686,6823,6824,6826,6830,6834,6838,6841,6852,6859,7267,7327,7330,7484,7501,7507,7509,7517,7519,7521,7523,7525,7527,7529,7531,7534,7535,7537,7804,7831,7836,7849,7852,7864,8001,8007,8010,8014,8017,8030,8136,8173,8177,8179,8180,8186,8193,8198,8206,8208,8209,8211,8212,8217,8223,8224,8226,8228,8230,8231,8234,8235,8237,8238,8242,8247,8248,8252,8255,8258,8261,8262,8264,8267,8270,8277,8279,8299,8305,8307,8320,8322,8334,8338,8380,8382,8517,8546,8655,8784,9112,9117,9123,9125,9129,9152,9266,9279,9283,9286,9293,9294,9297,9300,9302,9305,9308,9310,9314,9326,9329,9337,9338,9347,9353,9359,9471,9475,9478,9486,9493,9509,9513,9517,9533,9541,9544,9546,9550,9556,9559,9560,9562,9568,9572,9575,9577,9690,9693,9718,9726,9730,9731,9733,9735,9767,9868,9870,9877,9891,9894,9913,9924,9928,10220,10253,10260,10274,10276,10279,10280,10297,10300,10301,10303,10305,10308,10316,10325,10327,10388,10456,10466,10468,10471,10474,10482,10484,10492,10500,10502,10514,10520,10525,10530,10531,10691,10695,10703,10707,10711,10725,10731,10733,10745,10898,10902,10906,10909,10915,10930,10935,10937,10939,10954,10956,10958,10965,10968,11078,11093,11095,11100,11106,11107,11108,11117,11119,11125,11130,11133,11139,11142,11144,11147,11154,11155,11286,11309,11316,11317,11322,11332,11334,11339,11344,11346,11349,11352,11357,11429,11502,11509,11517,11520,11523,11525,11528,11529,11532,11534,11538,11542,11547,11549,11550,11553,11559,11566,11572,11573,11576,11580,11584,11586,11588,11593,11602,11714,11731,11736,11743,11744,11762,11768,11913,11927,11931,11935,11941,11964,11971,12006,12007,12091,12101,12117,12120,12131,12133,12136,12140,12142,12146,12147,12151,12154,12157,12162,12166,12169,12171,12173,12175,12177,12180,12184,12185,12186,12189,12192,12194,12198,12202,12203,12204,12208,12209,12212,12216,12221,12228,12239,12351,12355,12358,12361,12362,12367,12375,12380,12382,12384,12386,12389,12392,12393,12398,12405,12410,12417,12428,12433,12627,12630, +chr19 47510306 47526564 m54329U_210323_190418/99550444/ccs 69,254,388,578,751,921,1124,1288,1511,1702,2051,2238,2424,2643,2808,3015,3191,3355,3518,3840,4033,4170,4300,4416,4535,5384,5669,5846,6004,6152,6353,6545,6691,6879,7205,7424,7584,7716,8178,8336,8499,8668,8836,8999,9161,9349,9506,9666,9836,10032,10226,10451,10643,10805,11046,11220,11455,11626,11762,11925,12143,12331,12515,12742,12865,13038,13151,13409,13588,13793,13964,14174,14372,14614,14781,14914,15141,15352,15541,15708,15924, 124,133,151,93,137,142,116,131,104,97,108,119,106,102,127,116,131,105,303,118,92,104,78,84,84,246,104,102,141,145,152,132,160,295,118,125,118,124,84,123,121,165,121,128,94,113,108,94,132,118,140,96,103,114,79,95,80,135,123,143,122,102,117,76,130,109,141,86,78,117,102,109,105,114,124,147,127,130,154,193,122, 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+chr19 47510518 47527257 m84039_230401_034725_s4/117245222/ccs 109,309,434,575,838,917,1306,1716,1993,2199,2393,2776,2976,3087,3420,3614,3841,4003,4201,4303,4454,4711,4904,5482,5665,5793,5888,5987,6084,6197,6417,6743,6848,7097,7583,7825,8076,8260,8357,8495,8630,9029,9138,9285,9505,9657,9778,9902,10012,10206,10398,10640,10794,10875,11167,11303,11471,11684,11855,12064,12259,12450,12643,12738,12988,13130,13235,13386,13550,13765,13968,14239,14381,14548,14705,14920,15273,15384,15746,15901,15990,16173,16295,16451, 152,120,105,262,78,381,345,239,176,137,163,101,110,326,142,226,161,197,101,150,139,160,572,77,127,94,98,96,112,191,325,104,156,437,186,222,137,96,137,134,166,94,103,190,151,120,87,109,94,191,149,153,77,194,88,97,129,170,168,119,103,137,94,142,141,103,105,155,141,154,125,141,158,128,214,352,110,361,154,86,166,105,155,177, 108,261,429,539,837,916,1298,1651,1955,2169,2336,2556,2877,3086,3413,3562,3840,4002,4200,4302,4453,4593,4871,5476,5559,5792,5887,5986,6083,6196,6388,6742,6847,7004,7534,7769,8047,8213,8356,8494,8629,8796,9123,9241,9475,9656,9777,9865,10011,10106,10397,10547,10793,10871,11069,11255,11400,11600,11854,12023,12183,12362,12587,12737,12880,13129,13233,13340,13541,13691,13919,14093,14380,14539,14676,14919,15272,15383,15745,15900,15987,16156,16278,16450,16628, 1,48,5,36,1,1,8,65,38,30,57,220,99,1,7,52,1,1,1,1,1,118,33,6,106,1,1,1,1,1,29,1,1,93,49,56,29,47,1,1,1,233,15,44,30,1,1,37,1,100,1,93,1,4,98,48,71,84,1,41,76,88,56,1,108,1,2,46,9,74,49,146,1,9,29,1,1,1,1,1,3,17,17,1,1, 0,0,0,0,0,0,0,0,0,0,0,246,0,0,0,0,0,0,0,0,0,243,0,0,243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,245,0,0,0,0,0,0,0,0,0,243,0,0,0,0,0,0,0,0,0,243,0,0,0,0,0,0,0,0,0,244,0,0,0,0,0,0,0,0,0,0,0,0,0, 0,1,4,9,108,261,300,308,429,433,539,546,548,554,574,837,916,1298,1302,1305,1651,1687,1692,1705,1712,1715,1955,1992,2169,2197,2198,2264,2289,2336,2392,2556,2606,2610,2624,2659,2693,2710,2744,2764,2775,2780,2834,2877,2880,2909,2953,2955,2975,3023,3025,3086,3413,3419,3451,3531,3562,3580,3586,3604,3611,3613,3840,3900,3947,4002,4200,4259,4283,4302,4453,4511,4593,4596,4611,4621,4655,4660,4702,4709,4710,4744,4804,4821,4871,4903,5476,5477,5479,5481,5559,5562,5567,5589,5661,5664,5746,5792,5887,5986,6083,6196,6388,6391,6408,6416,6742,6770,6847,7004,7059,7096,7534,7582,7769,7773,7824,8047,8069,8074,8075,8213,8239,8259,8356,8452,8494,8573,8629,8796,8821,8873,8875,8884,8925,8934,8937,8999,9018,9028,9123,9134,9137,9241,9255,9273,9280,9284,9475,9504,9560,9606,9656,9728,9777,9865,9879,9892,9901,9966,9985,10011,10106,10113,10156,10173,10175,10176,10205,10267,10325,10397,10460,10512,10547,10620,10639,10793,10871,10874,10913,10997,11069,11133,11148,11152,11166,11255,11268,11278,11302,11400,11416,11436,11447,11470,11600,11611,11659,11663,11683,11751,11854,11951,12023,12029,12055,12060,12063,12143,12183,12188,12205,12240,12254,12256,12258,12304,12310,12362,12366,12382,12386,12387,12405,12444,12449,12476,12512,12554,12587,12608,12632,12642,12737,12880,12884,12891,12895,12952,12956,12964,12987,13129,13188,13233,13234,13274,13312,13340,13341,13342,13385,13541,13549,13691,13699,13726,13755,13757,13761,13764,13881,13919,13946,13964,13967,14034,14093,14106,14109,14153,14161,14163,14228,14238,14332,14380,14539,14547,14640,14676,14704,14919,15272,15346,15383,15745,15846,15900,15987,15989,16048,16156,16172,16278,16291,16294,16356,16410,16450,16527,16555,16628,16642,16671,16733,16735,16736, +chr19 47510580 47527139 m84039_230404_003541_s3/257819209/ccs 243,353,585,830,932,1232,1435,1885,2006,2279,2439,2684,2810,3061,3242,3408,3579,3818,4120,5057,5296,5606,5767,6149,6347,6686,6872,7005,7172,7333,7521,7893,8396,8590,8865,9047,9243,9416,9740,9946,10097,10278,10501,10695,10880,11083,11256,11457,11639,11849,12733,12845,13069,13286,13492,13680,13870,14057,14249,14429,14613,14785,14878,15009,15184,15343,15531,15710,15913,16116, 104,166,128,85,117,89,101,77,89,100,144,76,150,100,137,138,127,123,108,106,150,160,128,130,145,107,85,135,138,144,86,129,112,140,77,112,96,108,133,146,129,124,105,87,118,100,119,99,106,105,111,147,121,113,117,136,130,112,122,113,119,92,102,110,101,133,136,101,108,118, 107,347,519,713,915,1049,1321,1536,1962,2095,2379,2583,2760,2960,3161,3379,3546,3706,3941,4228,5163,5446,5766,5895,6279,6492,6793,6957,7140,7310,7477,7607,8022,8508,8730,8942,9159,9339,9524,9873,10092,10226,10402,10606,10782,10998,11183,11375,11556,11745,11954,12844,12992,13190,13399,13609,13816,14000,14169,14371,14542,14732,14877,14980,15119,15285,15476,15667,15811,16021,16234, 136,6,66,117,17,183,114,349,44,184,60,101,50,101,81,29,33,112,179,829,133,160,1,254,68,194,79,48,32,23,44,286,374,82,135,105,84,77,216,73,5,52,99,89,98,85,73,82,83,104,779,1,77,96,93,71,54,57,80,58,71,53,1,29,65,58,55,43,102,95,194, 0,0,0,0,0,0,0,243,0,0,0,0,0,0,0,0,0,243,0,246,0,0,0,0,0,0,0,0,0,0,0,247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 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+chr19 47510789 47515778 m84039_230404_003541_s3/81792247/ccs 74,395,586,767,906,1161,1313,1514,1632,1752,1917,2478,2772,2906,3307,3446,3599,3739,3884,4037,4633, 110,110,110,94,108,76,115,106,119,119,121,106,92,87,111,114,110,123,118,109,131, 184,505,696,861,1014,1237,1428,1620,1751,1871,2038,2584,2864,2993,3418,3560,3709,3862,4002,4146,4764, 211,81,71,45,147,76,86,12,1,46,440,188,42,314,28,39,30,22,35,487,79, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,244,0, 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+chr19 47510878 47527135 m84008_230107_003043_s1/179442349/ccs 201,384,567,756,960,1092,1279,1429,1579,1734,2020,2320,2475,2666,2854,3016,3182,3483,3686,3805,3953,4867,5011,5130,5288,5471,5661,5846,6034,6247,6387,6644,6841,6985,7171,7618,7885,7991,8151,8442,8624,8786,8941,9128,9263,9487,9649,9842,10080,10229,10442,10620,10813,11013,11182,11356,11538,11680,11865,12061,12208,12417,12591,12758,12974,13177,13361,13575,13774,13958,14089,14308,14480,14705,14902,15077,15271,15414,15601,15824,15977, 147,147,126,132,116,127,100,136,110,107,225,115,156,122,137,138,253,121,109,140,118,115,118,133,141,139,166,119,142,92,116,106,86,83,125,266,105,134,242,113,96,114,117,112,160,118,139,131,134,125,121,138,128,136,154,133,141,117,139,124,167,125,140,181,124,153,150,124,86,97,153,116,150,172,87,124,106,129,107,110,132, 146,348,531,693,888,1076,1219,1379,1565,1689,1841,2245,2435,2631,2788,2991,3154,3435,3604,3795,3945,4071,4982,5129,5263,5429,5610,5827,5965,6176,6339,6503,6750,6927,7068,7296,7884,7990,8125,8393,8555,8720,8900,9058,9240,9423,9605,9788,9973,10214,10354,10563,10758,10941,11149,11336,11489,11679,11797,12004,12185,12375,12542,12731,12939,13098,13330,13511,13699,13860,14055,14242,14424,14630,14877,14989,15201,15377,15543,15708,15934,16109, 55,36,36,63,72,16,60,50,14,45,179,75,40,35,66,25,28,48,82,10,8,796,29,1,25,42,51,19,69,71,48,141,91,58,103,322,1,1,26,49,69,66,41,70,23,64,44,54,107,15,88,57,55,72,33,20,49,1,68,57,23,42,49,27,35,79,31,64,75,98,34,66,56,75,25,88,70,37,58,116,43,20, 0,0,0,0,0,0,0,0,0,0,250,0,0,0,0,0,0,0,0,0,0,251,0,0,0,0,0,0,0,0,0,244,0,0,0,251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 8,15,16,146,157,161,162,179,186,188,200,348,374,377,381,383,531,533,536,539,542,544,547,550,552,556,563,566,660,693,701,703,727,730,734,736,755,862,888,890,893,894,897,900,903,909,913,919,924,928,930,932,934,938,942,959,1076,1079,1083,1085,1091,1219,1235,1238,1242,1246,1248,1250,1253,1258,1260,1263,1265,1266,1269,1278,1379,1395,1400,1404,1415,1422,1425,1428,1565,1567,1578,1644,1689,1707,1720,1723,1726,1733,1841,1846,1850,1852,1867,1870,1872,1875,1880,1881,1882,1887,1888,1890,1891,1893,1894,1896,1900,1902,1906,1907,1911,1912,1914,1916,1917,1920,1924,1929,1934,1941,1946,1947,1949,1954,1955,1957,1960,1962,1963,1966,1967,1970,1972,1974,1977,1980,1982,1983,1989,1992,1993,1996,1998,2000,2002,2005,2015,2019,2245,2251,2254,2271,2275,2276,2278,2281,2282,2285,2287,2292,2294,2298,2300,2301,2304,2307,2309,2312,2317,2319,2435,2442,2448,2450,2452,2455,2459,2463,2469,2471,2474,2631,2633,2639,2640,2645,2647,2648,2652,2654,2659,2663,2665,2788,2802,2805,2808,2810,2812,2815,2819,2825,2832,2835,2838,2841,2843,2847,2853,2991,2993,2997,3001,3015,3154,3157,3159,3178,3181,3435,3442,3449,3452,3454,3460,3465,3474,3476,3482,3604,3611,3619,3624,3627,3630,3633,3634,3636,3644,3650,3653,3665,3670,3672,3675,3681,3685,3795,3804,3902,3945,3952,4071,4083,4094,4096,4100,4102,4106,4110,4111,4113,4117,4136,4137,4139,4141,4143,4144,4148,4152,4154,4170,4173,4177,4188,4192,4193,4200,4203,4204,4207,4210,4212,4214,4215,4220,4225,4226,4229,4236,4239,4254,4262,4264,4272,4275,4284,4294,4296,4298,4301,4303,4310,4311,4312,4318,4321,4323,4325,4331,4335,4336,4341,4343,4345,4352,4353,4360,4365,4367,4369,4374,4381,4399,4401,4405,4407,4410,4411,4415,4416,4417,4421,4424,4435,4447,4451,4453,4457,4460,4463,4467,4473,4476,4477,4478,4480,4483,4486,4491,4496,4502,4514,4520,4537,4538,4540,4546,4548,4550,4552,4555,4557,4562,4573,4577,4580,4589,4602,4604,4606,4609,4617,4638,4641,4643,4650,4652,4654,4657,4659,4663,4664,4665,4670,4674,4681,4684,4685,4686,4690,4693,4696,4741,4743,4750,4751,4753,4755,4757,4759,4764,4770,4772,4775,4777,4780,4781,4783,4787,4791,4798,4807,4810,4813,4815,4829,4833,4834,4849,4866,4916,4966,4982,4985,4990,4993,4997,4999,5010,5129,5263,5265,5267,5271,5273,5287,5328,5400,5425,5429,5431,5436,5439,5442,5459,5462,5463,5470,5610,5619,5630,5641,5660,5827,5833,5834,5839,5842,5845,5965,5982,5987,5989,5992,5995,5998,6000,6002,6004,6005,6008,6012,6015,6017,6026,6031,6033,6176,6179,6180,6197,6200,6201,6208,6213,6216,6219,6225,6233,6238,6240,6246,6339,6348,6351,6353,6356,6358,6360,6366,6372,6374,6376,6377,6381,6382,6386,6503,6508,6510,6511,6514,6516,6519,6523,6529,6531,6532,6535,6537,6539,6541,6543,6549,6550,6557,6563,6565,6566,6571,6592,6594,6600,6603,6604,6606,6608,6611,6612,6615,6618,6625,6629,6643,6750,6769,6770,6772,6776,6777,6780,6784,6787,6807,6808,6815,6820,6840,6927,6939,6940,6944,6946,6947,6948,6951,6962,6971,6984,7068,7092,7096,7097,7100,7102,7108,7112,7115,7116,7128,7130,7131,7134,7136,7138,7166,7169,7170,7296,7303,7309,7314,7325,7328,7330,7339,7340,7346,7352,7353,7359,7360,7364,7366,7371,7374,7375,7379,7380,7381,7382,7385,7389,7390,7396,7397,7399,7401,7403,7404,7407,7408,7410,7411,7413,7414,7415,7416,7418,7420,7425,7434,7435,7437,7440,7443,7448,7450,7452,7454,7457,7459,7462,7464,7466,7469,7472,7480,7484,7487,7488,7490,7493,7495,7496,7501,7502,7507,7511,7512,7514,7516,7518,7520,7521,7522,7526,7528,7530,7531,7534,7537,7538,7541,7542,7544,7546,7550,7553,7555,7556,7559,7560,7564,7570,7572,7575,7577,7578,7581,7584,7585,7587,7589,7591,7592,7597,7602,7604,7608,7617,7884,7990,8125,8130,8150,8393,8411,8413,8415,8419,8421,8422,8426,8431,8434,8436,8441,8555,8570,8574,8579,8592,8594,8595,8601,8603,8610,8623,8720,8726,8729,8738,8742,8745,8747,8753,8756,8761,8766,8769,8785,8900,8905,8909,8910,8912,8915,8922,8929,8933,8940,9058,9063,9066,9083,9089,9091,9094,9106,9108,9116,9127,9240,9258,9262,9423,9430,9436,9438,9443,9444,9446,9449,9450,9456,9478,9486,9605,9620,9623,9626,9628,9644,9647,9648,9788,9792,9796,9797,9803,9805,9807,9810,9813,9816,9818,9825,9830,9834,9835,9841,9973,9975,9981,10005,10009,10010,10015,10018,10020,10022,10026,10030,10037,10045,10047,10068,10076,10079,10214,10221,10225,10228,10354,10357,10374,10378,10381,10384,10386,10396,10399,10400,10408,10415,10417,10420,10424,10426,10430,10435,10441,10563,10567,10572,10578,10581,10585,10588,10591,10592,10595,10599,10611,10613,10615,10619,10758,10771,10772,10776,10779,10782,10784,10788,10794,10801,10807,10810,10812,10906,10941,10943,10945,10946,10948,10956,10958,10965,10968,10969,10972,10974,10975,10978,10979,10981,10984,10986,10988,10991,10992,10993,10998,11002,11008,11012,11149,11153,11163,11167,11169,11171,11173,11181,11336,11343,11355,11489,11491,11495,11504,11509,11512,11517,11521,11523,11525,11532,11537,11679,11797,11810,11816,11826,11828,11829,11831,11832,11836,11837,11839,11847,11849,11860,11864,12004,12007,12012,12017,12020,12021,12023,12024,12029,12054,12060,12185,12207,12375,12383,12384,12386,12388,12389,12395,12399,12405,12408,12413,12416,12542,12546,12547,12549,12552,12562,12565,12568,12572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+chr19 47510884 47527565 m54329U_210813_020940/103744027/ccs 182,338,503,691,930,1116,1280,1480,1641,1808,1995,2163,2300,2459,2642,2838,3121,3275,3595,3841,3960,4794,5036,5273,5595,5788,6357,6550,6750,6991,7224,7369,7620,7828,7993,8277,8695,9295,9463,9640,9851,10039,10230,10398,10574,10774,10946,11107,11281,11450,11650,12205,12352,12521,12680,12923,13132,13307,13478,13663,13871,14042,14218,14398,14565,14768,14993,15411,15599,15765,15937,16107,16277,16464, 116,117,131,207,116,109,103,124,137,171,110,126,137,126,131,247,116,90,93,84,100,118,148,102,118,121,108,105,120,117,103,102,121,83,283,136,124,130,133,131,150,117,83,119,139,115,127,147,122,138,127,100,136,123,128,112,114,120,135,139,122,127,151,128,202,132,417,160,135,118,131,156,146,118, 121,298,455,634,898,1046,1225,1383,1604,1778,1979,2105,2289,2437,2585,2773,3085,3237,3365,3688,3925,4060,4912,5184,5375,5713,5909,6465,6655,6870,7108,7327,7471,7741,7911,8276,8413,8819,9425,9596,9771,10001,10156,10313,10517,10713,10889,11073,11254,11403,11588,11777,12305,12488,12644,12808,13035,13246,13427,13613,13802,13993,14169,14369,14526,14767,14900,15410,15571,15734,15883,16068,16263,16423, 61,40,48,57,32,70,55,97,37,30,16,58,11,22,57,65,36,38,230,153,35,734,124,89,220,75,448,85,95,121,116,42,149,87,82,1,282,476,38,44,80,38,74,85,57,61,57,34,27,47,62,428,47,33,36,115,97,61,51,50,69,49,49,29,39,1,93,1,28,31,54,39,14,41, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,250,0,0,0,0,0,0,0,0,0,0,244,0,0,0,244,244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 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+chr19 47510892 47522730 m64076_210328_012155/128584028/ccs 169,319,550,702,895,1043,1205,1383,1561,1753,2019,2167,2917,3066,3430,3582,3753,3923,4109,4377,4839,5109,5286,5457,5606,5803,6072,6355,6517,6760,6888,7100,7209,7611,7825,8086,8275,8399,8576,8701,8873,9064,9315,9441,9663,9837,10045,10258,10468,10835,11025,11166,11327,11499,11669, 115,143,108,152,147,141,136,150,120,125,85,128,89,89,83,103,84,185,101,84,77,104,103,120,138,235,195,112,83,127,154,108,116,128,247,130,95,128,121,171,109,108,125,128,105,152,146,114,110,130,138,144,162,112,132, 113,284,462,658,854,1042,1184,1341,1533,1681,1878,2104,2295,3006,3155,3513,3685,3837,4108,4210,4461,4916,5213,5389,5577,5744,6038,6267,6467,6600,6887,7042,7208,7325,7739,8072,8216,8370,8527,8697,8872,8982,9172,9440,9569,9768,9989,10191,10372,10578,10965,11163,11310,11489,11611,11801, 56,35,88,44,41,1,21,42,28,72,141,63,622,60,275,69,68,86,1,167,378,193,73,68,29,59,34,88,50,160,1,58,1,286,86,14,59,29,49,4,1,82,143,1,94,69,56,67,96,257,60,3,17,10,58,28, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,245,246,0,0,0,0,0,0,0,0,0,0,0,0,249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 113,117,120,123,128,133,138,139,143,149,150,151,156,161,168,284,288,307,314,315,318,462,474,478,482,483,486,490,495,497,509,514,517,521,523,526,529,532,537,540,542,546,549,658,659,661,678,683,685,692,695,701,854,877,881,882,886,890,894,1042,1145,1184,1193,1198,1201,1204,1341,1353,1358,1360,1361,1363,1371,1374,1375,1379,1382,1533,1535,1543,1548,1560,1681,1683,1687,1691,1694,1695,1697,1700,1701,1703,1706,1707,1708,1709,1710,1711,1715,1718,1721,1728,1735,1736,1737,1739,1746,1747,1752,1878,1885,1888,1891,1892,1894,1909,1915,1922,1929,1932,1939,1944,1945,1947,1952,1953,1962,1965,1969,1971,1981,1982,1986,1988,2004,2008,2010,2018,2104,2115,2130,2133,2135,2137,2139,2141,2144,2147,2153,2158,2163,2166,2295,2297,2301,2303,2304,2307,2310,2312,2322,2328,2375,2410,2412,2432,2439,2451,2453,2455,2462,2466,2467,2470,2472,2473,2474,2477,2480,2538,2544,2548,2551,2558,2633,2641,2647,2649,2655,2661,2662,2666,2668,2669,2673,2677,2679,2681,2686,2689,2692,2694,2699,2706,2711,2714,2716,2732,2743,2750,2755,2806,2809,2822,2823,2828,2847,2851,2857,2859,2861,2863,2867,2872,2875,2878,2879,2881,2884,2885,2895,2916,3006,3010,3016,3020,3022,3023,3025,3030,3034,3045,3056,3062,3065,3155,3158,3174,3176,3177,3179,3186,3191,3194,3195,3207,3209,3213,3215,3220,3234,3235,3240,3242,3244,3247,3248,3251,3253,3255,3257,3323,3333,3334,3337,3344,3346,3348,3349,3351,3360,3367,3370,3371,3374,3375,3377,3378,3380,3386,3388,3397,3406,3429,3513,3516,3528,3539,3541,3543,3545,3550,3551,3568,3570,3581,3685,3689,3695,3706,3711,3712,3715,3717,3722,3726,3730,3732,3752,3837,3842,3843,3847,3850,3860,3864,3871,3876,3884,3887,3914,3922,4108,4210,4211,4217,4221,4227,4232,4233,4236,4243,4246,4261,4269,4280,4283,4292,4302,4304,4306,4309,4311,4320,4329,4330,4332,4334,4344,4350,4369,4376,4461,4463,4464,4467,4470,4473,4474,4477,4480,4483,4486,4487,4488,4490,4493,4496,4506,4512,4531,4533,4547,4550,4552,4556,4558,4560,4562,4565,4567,4572,4574,4576,4578,4580,4583,4585,4587,4608,4610,4612,4614,4616,4617,4619,4624,4627,4653,4660,4663,4675,4677,4690,4691,4692,4693,4696,4697,4698,4702,4705,4708,4713,4723,4725,4731,4733,4734,4736,4739,4740,4742,4745,4746,4747,4752,4759,4761,4762,4764,4766,4768,4773,4774,4775,4776,4782,4787,4789,4792,4793,4795,4797,4808,4819,4823,4838,4916,4936,4943,4952,4954,4957,4972,4975,4979,4981,4983,4986,4988,4990,4991,4995,4998,4999,5001,5006,5012,5016,5019,5023,5098,5102,5108,5213,5215,5218,5234,5240,5244,5245,5247,5253,5267,5269,5270,5274,5275,5277,5279,5281,5283,5285,5389,5391,5412,5416,5419,5424,5427,5430,5432,5434,5436,5437,5441,5443,5448,5450,5453,5456,5577,5598,5605,5744,5747,5749,5757,5765,5768,5769,5774,5776,5779,5780,5783,5787,5788,5791,5792,5793,5799,5802,6038,6071,6267,6272,6285,6287,6291,6297,6299,6310,6316,6318,6321,6323,6324,6327,6344,6346,6354,6401,6467,6473,6476,6490,6492,6498,6511,6516,6600,6617,6623,6625,6628,6629,6634,6635,6638,6642,6646,6650,6654,6657,6660,6663,6666,6667,6669,6672,6674,6679,6681,6682,6685,6689,6691,6693,6696,6697,6699,6703,6707,6709,6711,6713,6715,6717,6719,6721,6724,6725,6727,6736,6746,6748,6754,6759,6887,6916,7042,7046,7048,7051,7054,7057,7061,7065,7067,7070,7075,7077,7081,7085,7087,7099,7208,7325,7329,7331,7335,7342,7345,7347,7353,7355,7357,7362,7363,7364,7367,7369,7377,7388,7391,7392,7396,7398,7399,7401,7402,7413,7416,7418,7420,7421,7424,7427,7428,7430,7431,7432,7435,7437,7438,7442,7445,7448,7451,7452,7454,7457,7460,7468,7470,7472,7475,7477,7480,7482,7484,7487,7490,7496,7498,7505,7508,7511,7513,7514,7519,7520,7522,7525,7530,7532,7536,7544,7546,7548,7549,7550,7556,7559,7560,7562,7564,7565,7568,7571,7574,7577,7578,7582,7588,7595,7596,7599,7602,7603,7605,7607,7610,7739,7740,7742,7745,7752,7759,7766,7772,7777,7800,7802,7806,7824,8072,8075,8080,8085,8216,8219,8231,8235,8246,8248,8254,8274,8370,8382,8390,8398,8527,8532,8536,8537,8543,8549,8553,8557,8560,8562,8568,8572,8575,8611,8697,8700,8872,8982,8992,8994,8998,9001,9024,9027,9029,9031,9032,9039,9041,9044,9045,9047,9048,9053,9057,9060,9062,9063,9172,9179,9182,9191,9196,9197,9199,9203,9206,9211,9213,9214,9218,9219,9223,9227,9230,9231,9233,9235,9237,9238,9245,9246,9248,9251,9255,9258,9260,9262,9265,9267,9270,9274,9279,9281,9287,9299,9312,9314,9440,9569,9584,9590,9593,9594,9595,9596,9602,9604,9606,9607,9610,9611,9617,9621,9623,9632,9641,9646,9650,9656,9659,9662,9688,9768,9771,9774,9777,9783,9793,9796,9797,9800,9801,9804,9805,9810,9814,9815,9817,9821,9823,9825,9828,9836,9989,9993,10014,10016,10026,10028,10033,10036,10038,10044,10130,10191,10198,10204,10207,10211,10213,10215,10217,10225,10230,10233,10234,10241,10245,10255,10257,10372,10377,10386,10387,10394,10398,10401,10404,10406,10407,10416,10419,10420,10425,10426,10435,10444,10447,10450,10455,10458,10461,10464,10467,10578,10584,10588,10593,10597,10599,10601,10606,10609,10616,10620,10621,10624,10625,10626,10628,10630,10632,10634,10636,10639,10653,10660,10678,10690,10739,10745,10758,10790,10793,10794,10798,10801,10810,10816,10823,10829,10834,10965,10973,10978,10987,10990,10994,11006,11010,11013,11024,11163,11165,11310,11313,113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+chr19 47511145 47534069 m64076_221119_202646/33490605/ccs 118,314,490,706,861,1214,1769,2289,2489,2643,2812,2972,3128,3620,3883,3978,4140,4245,4474,4800,5147,5488,5729,5904,6118,6315,6533,6717,7092,7281,7627,7779,7908,8108,8249,8448,8654,8755,9754,9916,10133,10511,11157,11349,11521,11710,12135,12347,12505,12688,12842,13176,13316,13556,13805,13976,14143,14380,14584,14896,15089,15276,15444,15615,15750,15991,16279,16449,16620,16964,17159,17328,17546,17704,18183,18542,18835,19003,19337,19532,19694,19927,20123,20267,20628,20973,21138,21353,21610,21727,21916,22484, 158,140,215,104,308,518,480,165,150,168,156,155,362,232,94,161,78,128,287,311,307,180,139,143,161,136,150,288,122,256,151,128,181,140,193,205,80,957,154,83,290,628,163,139,149,424,211,93,162,145,333,130,161,156,152,166,168,192,311,143,162,151,170,129,196,162,148,167,307,162,161,152,157,429,326,292,153,322,194,161,172,154,138,360,327,164,193,256,116,169,561,168, 112,276,454,705,810,1169,1732,2249,2454,2639,2811,2968,3127,3490,3852,3977,4139,4218,4373,4761,5111,5454,5668,5868,6047,6279,6451,6683,7005,7214,7537,7778,7907,8089,8248,8442,8653,8734,9712,9908,9999,10423,11139,11320,11488,11670,12134,12346,12440,12667,12833,13175,13306,13477,13712,13957,14142,14311,14572,14895,15039,15251,15427,15614,15744,15946,16153,16427,16616,16927,17126,17320,17480,17703,18133,18509,18834,18988,19325,19531,19693,19866,20081,20261,20627,20955,21137,21331,21609,21726,21896,22477,22652, 6,38,36,1,51,45,37,40,35,4,1,4,1,130,31,1,1,27,101,39,36,34,61,36,71,36,82,34,87,67,90,1,1,19,1,6,1,21,42,8,134,88,18,29,33,40,1,1,65,21,9,1,10,79,93,19,1,69,12,1,50,25,17,1,6,45,126,22,4,37,33,8,66,1,50,33,1,15,12,1,1,61,42,6,1,18,1,22,1,1,20,7,22, 0,0,0,0,0,0,0,0,0,0,0,0,0,245,0,0,0,0,244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,244,243,0,0,0,0,0,0,0,0,0,0,0,0,243,0,0,0,0,0,0,0,0,0,0,0,245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 112,114,117,221,276,285,291,295,300,302,313,454,474,478,480,483,489,705,810,812,818,828,842,856,860,1169,1179,1189,1213,1732,1736,1738,1762,1763,1768,2249,2281,2288,2454,2456,2463,2465,2470,2488,2639,2642,2811,2968,2971,3031,3127,3490,3546,3551,3552,3554,3559,3569,3573,3575,3579,3619,3852,3859,3863,3869,3878,3882,3977,4139,4218,4230,4236,4238,4244,4325,4373,4379,4380,4390,4457,4459,4469,4471,4473,4761,4763,4773,4776,4778,4791,4795,4799,5111,5120,5146,5454,5468,5475,5479,5481,5483,5487,5668,5669,5675,5681,5689,5697,5699,5702,5705,5710,5723,5728,5868,5877,5880,5886,5888,5903,6047,6061,6066,6068,6080,6082,6094,6099,6102,6117,6279,6288,6314,6451,6474,6477,6481,6501,6505,6512,6513,6526,6528,6532,6590,6683,6685,6688,6689,6707,6710,6714,6716,7005,7011,7015,7017,7066,7068,7091,7131,7214,7228,7229,7231,7233,7241,7261,7262,7264,7266,7277,7279,7280,7537,7588,7591,7594,7598,7608,7610,7617,7622,7626,7778,7907,8089,8098,8107,8164,8248,8442,8445,8447,8653,8734,8754,9712,9716,9736,9738,9743,9753,9908,9915,9999,10012,10083,10086,10087,10107,10111,10113,10114,10116,10117,10122,10128,10132,10423,10429,10443,10445,10450,10455,10458,10459,10463,10469,10471,10475,10485,10488,10490,10494,10497,10499,10510,11139,11150,11156,11320,11338,11348,11488,11499,11510,11512,11516,11520,11670,11679,11682,11697,11702,11705,11706,11709,12134,12346,12440,12459,12462,12471,12478,12485,12487,12492,12493,12496,12497,12500,12504,12667,12673,12687,12833,12841,13175,13306,13308,13311,13315,13477,13494,13526,13532,13535,13537,13541,13555,13712,13719,13721,13733,13735,13736,13740,13741,13743,13745,13747,13755,13757,13760,13761,13763,13777,13779,13780,13782,13787,13793,13795,13797,13799,13800,13804,13957,13969,13972,13975,14142,14311,14343,14349,14358,14360,14361,14379,14572,14583,14895,15039,15044,15048,15052,15054,15057,15060,15070,15072,15076,15081,15085,15088,15251,15257,15269,15273,15275,15427,15431,15434,15436,15440,15443,15614,15744,15749,15946,15960,15971,15988,15990,16153,16156,16159,16161,16166,16167,16170,16172,16174,16176,16177,16179,16182,16185,16186,16187,16205,16207,16209,16211,16213,16216,16218,16221,16236,16241,16249,16251,16256,16260,16267,16273,16278,16427,16434,16448,16616,16619,16927,16928,16959,16960,16963,17126,17132,17144,17151,17153,17158,17320,17327,17480,17484,17493,17499,17521,17524,17525,17527,17531,17534,17539,17542,17544,17545,17703,18133,18177,18178,18182,18509,18541,18834,18988,18991,18996,18998,19002,19325,19329,19332,19333,19336,19531,19693,19866,19876,19878,19880,19883,19901,19906,19909,19911,19926,20081,20090,20104,20106,20109,20114,20122,20261,20266,20627,20955,20972,21137,21331,21347,21352,21609,21726,21896,21899,21915,22477,22483,22652,22668,22671,22674, +chr19 47511426 47524219 m54329U_210326_192251/44827220/ccs 215,472,660,844,1012,1209,1413,1603,1777,1961,2135,2312,2457,2621,2839,2980,3357,4240,4387,4611,4769,4923,5093,5301,5521,5688,5925,6064,6260,6493,6659,6852,7072,7329,7478,7662,7886,8068,8274,8437,8624,8811,9021,9191,9346,9526,9733,9916,10068,10271,10450,10630,10793,10968,11197,11471,11643,11806,12186,12403,12596, 157,106,148,145,138,130,132,135,118,123,160,136,103,136,106,376,168,119,116,146,117,139,168,143,119,140,113,144,135,136,109,122,137,123,131,170,135,141,157,128,148,145,130,147,171,132,129,143,122,128,138,123,142,126,191,142,150,319,149,137,148, 165,372,578,808,989,1150,1339,1545,1738,1895,2084,2295,2448,2560,2757,2945,3356,3525,4359,4503,4757,4886,5062,5261,5444,5640,5828,6038,6208,6395,6629,6768,6974,7209,7452,7609,7832,8021,8209,8431,8565,8772,8956,9151,9338,9517,9658,9862,10059,10190,10399,10588,10753,10935,11094,11388,11613,11793,12125,12335,12540, 50,100,82,36,23,59,74,58,39,66,51,17,9,61,82,35,1,715,28,108,12,37,31,40,77,48,97,26,52,98,30,84,98,120,26,53,54,47,65,6,59,39,65,40,8,9,75,54,9,81,51,42,40,33,103,83,30,13,61,68,56, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 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+chr19 47514327 47528440 m84039_230401_034725_s4/169282444/ccs 131,300,521,1342,1534,1748,1896,2124,2283,2476,2621,2770,2903,3009,3184,3391,3531,3682,4156,4463,4619,4830,5234,5530,5763,5935,6298,6513,6661,7071,7241,7412,7648,7785,7987,8168,8374,8494,8668,8838,9174,9630,9787,9976,10168,10360,10574,10856,10991,11173,11353,11559,11702,11909,12129,12307,12532,12682,12887,13081,13261,13444,13642,13835, 125,111,89,105,128,104,130,129,101,120,117,132,105,146,109,89,93,123,123,106,142,108,105,143,129,97,101,128,110,108,122,141,111,94,144,121,86,143,101,235,113,106,128,115,127,126,139,112,134,102,128,138,143,115,86,149,105,140,133,109,134,139,107,131, 256,411,610,1447,1662,1852,2026,2253,2384,2596,2738,2902,3008,3155,3293,3480,3624,3805,4279,4569,4761,4938,5339,5673,5892,6032,6399,6641,6771,7179,7363,7553,7759,7879,8131,8289,8460,8637,8769,9073,9287,9736,9915,10091,10295,10486,10713,10968,11125,11275,11481,11697,11845,12024,12215,12456,12637,12822,13020,13190,13395,13583,13749, 44,110,732,87,86,44,98,30,92,25,32,1,1,29,98,51,58,351,184,50,69,296,191,90,43,266,114,20,300,62,49,95,26,108,37,85,34,31,69,101,343,51,61,77,65,88,143,23,48,78,78,5,64,105,92,76,45,65,61,71,49,59,86, 0,0,248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,247,0,0,0,244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 1,3,6,27,31,42,45,47,53,60,61,63,65,74,76,80,81,85,87,89,91,96,97,99,102,106,107,108,109,113,115,118,121,125,126,128,130,256,258,263,288,293,299,411,416,424,427,429,433,440,447,450,454,458,460,462,465,469,472,474,476,481,484,493,498,518,520,610,611,623,627,631,634,642,650,654,658,659,661,663,665,671,684,685,687,689,691,692,702,711,721,736,740,741,784,802,810,812,820,823,842,846,849,851,858,859,860,866,868,869,871,876,900,901,908,911,915,917,922,927,929,931,935,937,940,944,947,949,953,955,958,959,963,964,969,971,972,983,995,999,1001,1002,1005,1008,1011,1012,1015,1018,1025,1026,1028,1031,1034,1039,1044,1050,1062,1068,1070,1076,1085,1088,1090,1094,1096,1098,1100,1103,1105,1110,1112,1114,1116,1118,1123,1128,1137,1150,1152,1154,1157,1162,1165,1171,1189,1191,1198,1199,1200,1202,1203,1205,1207,1212,1218,1219,1222,1232,1233,1234,1238,1241,1244,1284,1289,1291,1296,1298,1299,1301,1303,1305,1311,1319,1330,1341,1357,1407,1447,1450,1460,1462,1463,1468,1469,1470,1477,1480,1487,1488,1493,1498,1504,1506,1509,1513,1515,1525,1529,1533,1572,1662,1665,1667,1669,1673,1686,1687,1689,1691,1692,1693,1696,1699,1700,1709,1711,1713,1716,1721,1724,1725,1729,1732,1735,1747,1852,1861,1870,1872,1876,1885,1887,1893,1895,1922,1951,2021,2026,2029,2031,2033,2035,2040,2043,2049,2050,2051,2056,2060,2064,2065,2067,2069,2070,2071,2073,2074,2080,2081,2092,2095,2096,2107,2108,2118,2121,2123,2253,2255,2257,2260,2262,2271,2274,2277,2282,2384,2403,2415,2424,2426,2428,2429,2431,2433,2439,2440,2444,2446,2452,2454,2458,2472,2475,2551,2596,2597,2601,2604,2607,2620,2738,2741,2745,2749,2760,2766,2769,2902,2929,2955,3008,3043,3155,3160,3161,3164,3183,3293,3302,3311,3314,3318,3319,3320,3322,3328,3330,3338,3342,3343,3345,3349,3350,3351,3357,3362,3363,3369,3381,3390,3480,3484,3486,3487,3504,3506,3508,3511,3515,3517,3519,3523,3530,3624,3640,3648,3670,3671,3674,3676,3678,3681,3719,3805,3807,3811,3813,3815,3818,3820,3842,3847,3848,3851,3853,3857,3867,3869,3871,3875,3877,3878,3879,3884,3885,3886,3889,3891,3892,3898,3899,3903,3905,3910,3929,3935,4001,4003,4005,4008,4011,4016,4031,4034,4039,4040,4041,4046,4050,4052,4054,4056,4063,4064,4066,4068,4070,4072,4076,4079,4080,4082,4084,4088,4093,4098,4100,4102,4108,4109,4113,4115,4116,4122,4123,4125,4127,4131,4133,4135,4142,4146,4152,4155,4279,4304,4324,4325,4328,4330,4336,4340,4353,4364,4367,4368,4370,4372,4375,4377,4379,4382,4383,4386,4388,4392,4394,4397,4402,4405,4406,4411,4413,4417,4423,4427,4428,4431,4434,4439,4440,4443,4445,4448,4450,4462,4509,4562,4569,4570,4579,4589,4595,4598,4603,4618,4761,4763,4768,4770,4775,4776,4780,4781,4782,4786,4789,4791,4794,4796,4798,4803,4805,4815,4821,4827,4829,4938,4941,4944,4946,4949,4950,4952,4954,4958,4960,4961,4965,4966,4970,4973,4975,4978,4980,4983,4990,4991,4998,5001,5009,5017,5020,5022,5059,5099,5101,5130,5146,5149,5152,5155,5159,5162,5163,5166,5172,5174,5177,5181,5187,5190,5198,5202,5204,5205,5210,5212,5221,5233,5295,5339,5347,5349,5351,5355,5357,5362,5366,5370,5371,5372,5393,5448,5468,5472,5516,5520,5523,5525,5529,5673,5676,5677,5682,5684,5687,5696,5698,5700,5703,5706,5708,5712,5713,5715,5721,5723,5727,5728,5730,5732,5735,5737,5738,5743,5747,5751,5754,5762,5838,5892,5897,5899,5902,5905,5910,5913,5914,5916,5928,5934,6032,6057,6060,6063,6073,6075,6078,6082,6083,6086,6089,6092,6098,6104,6108,6166,6182,6185,6192,6238,6247,6254,6259,6264,6273,6297,6399,6404,6407,6411,6419,6426,6428,6429,6433,6435,6439,6444,6445,6449,6451,6453,6463,6467,6475,6479,6481,6482,6485,6487,6488,6490,6504,6509,6512,6577,6641,6643,6645,6660,6701,6771,6773,6778,6780,6784,6788,6799,6801,6806,6812,6814,6820,6823,6825,6831,6832,6836,6839,6850,6853,6860,6866,6869,6881,6883,6885,6888,6944,6951,6960,6965,6971,6974,6977,6980,6985,6986,6992,6998,7009,7010,7017,7043,7045,7065,7067,7070,7140,7151,7179,7181,7187,7189,7192,7199,7204,7205,7208,7212,7215,7216,7240,7278,7315,7363,7365,7367,7369,7371,7378,7385,7386,7387,7390,7392,7394,7397,7400,7411,7553,7570,7577,7583,7585,7593,7597,7633,7647,7759,7782,7784,7879,7881,7891,7934,7935,7938,7941,7945,7946,7951,7953,7957,7960,7962,7963,7982,7984,7986,8131,8134,8151,8154,8156,8157,8167,8289,8291,8312,8314,8316,8317,8320,8323,8327,8331,8333,8336,8340,8343,8344,8346,8347,8351,8352,8355,8357,8362,8365,8367,8368,8372,8373,8460,8478,8487,8493,8525,8637,8642,8643,8656,8659,8667,8737,8769,8785,8791,8794,8796,8800,8802,8806,8811,8813,8814,8817,8821,8834,8837,9073,9103,9104,9121,9123,9125,9134,9142,9152,9158,9160,9170,9173,9244,9287,9294,9298,9301,9313,9322,9324,9327,9331,9333,9335,9338,9339,9342,9343,9346,9355,9358,9364,9367,9369,9370,9372,9374,9375,9379,9384,9387,9395,9449,9453,9491,9526,9528,9534,9537,9548,9553,9560,9561,9563,9565,9570,9573,9575,9576,9579,9580,9584,9585,9587,9589,9592,9601,9608,9610,9615,9627,9629,9652,9726,9736,9743,9749,9752,9766,9768,9770,9772,9775,9778,9780,9783,9786,9874,9915,9918,9925,9936,9940,9943,9953,9956,9961,9964,9966,9975,10091,10109,10112,10126,10130,10133,10136,10137,10139,10144,10147,10149,10152,10160,10163,10167,10221,10295,10306,10309,10311,10313,10323,10326,10328,10331,10333,10335,10339,10345,10349,10351,10353,10357,10359,10419,10486,10488,10493,10495,10496,10498,10504,10511,10515,10519,10521,10522,10528,10529,10543,10545,10546,10549,10558,10564,10566,10568,10571,10572,10573,10713,10715,10716,10718,10726,10731,10736,10737,10739,10740,10742,10746,10751,10752,10754,10755,10758,10768,10770,10773,10806,10851,10855,10968,10974,10984,10985,10990,11125,11144,11157,11160,11172,11275,11300,11302,11316,11319,11327,11333,11341,11343,11346,11349,11352,11481,11489,11492,11496,11501,11502,11505,11513,11521,11523,11528,11530,11533,11535,11540,11556,11558,11670,11697,11698,11701,11845,11854,11863,11867,11869,11879,11883,11886,11894,11908,12024,12042,12045,12050,12057,12074,12078,12081,12082,12093,12095,12098,12100,12107,12119,12121,12128,12215,12228,12243,12244,12252,12255,12260,12261,12264,12268,12271,12274,12278,12285,12289,12290,12297,12299,12303,12305,12306,12456,12462,12466,12469,12470,12474,12475,12478,12481,12488,12491,12493,12505,12515,12531,12637,12662,12668,12677,12681,12822,12825,12833,12837,12838,12843,12845,12847,12848,12854,12856,12860,12863,12866,12869,12886,13020,13023,13026,13034,13037,13039,13041,13043,13046,13048,13049,13052,13069,13072,13076,13078,13080,13190,13203,13207,13211,13215,13236,13238,13240,13241,13244,13246,13248,13260,13301,13395,13405,13407,13410,13412,13417,13419,13427,13429,13434,13435,13438,13443,13470,13583,13591,13593,13594,13600,13604,13610,13618,13621,13625,13634,13641,13749,13764,13789,13791,13798,13799,13825,13830,13831,13834,13966,13968,13990,13992,13994,13996,13998,14001,14002,14004,14008,14043,14047,14087,14091, +chr19 47514355 47517971 m84008_230107_003043_s1/209457465/ccs 126,328,635,1131,1281,1504,1686,2266,2407,2618,2777,2936,3093, 139,248,140,119,116,145,579,140,136,100,110,150,138, 90,265,576,775,1250,1397,1649,2265,2406,2543,2718,2887,3086,3231, 36,63,59,356,31,107,37,1,1,75,59,49,7,1, 0,0,0,0,0,0,0,0,0,0,0,0,0,0, 90,93,97,98,100,102,108,110,114,118,125,265,266,272,277,279,283,285,287,290,294,298,300,301,312,316,318,319,325,327,576,583,584,592,594,595,596,600,602,604,609,615,617,621,623,627,631,632,634,698,775,805,833,873,881,884,886,888,890,895,900,902,905,908,910,913,917,920,922,926,928,978,1017,1023,1035,1041,1110,1119,1127,1130,1195,1211,1250,1252,1256,1257,1262,1264,1269,1280,1397,1400,1403,1405,1408,1410,1413,1419,1424,1437,1478,1480,1483,1487,1491,1499,1503,1649,1685,2265,2406,2543,2545,2550,2551,2553,2556,2564,2568,2573,2574,2578,2581,2584,2585,2587,2589,2590,2592,2597,2600,2611,2617,2718,2721,2724,2734,2737,2740,2743,2750,2754,2759,2767,2769,2771,2776,2887,2903,2907,2911,2912,2930,2935,3086,3092,3231,3604, +chr19 47514515 47519907 m84008_230107_003043_s1/130946739/ccs 153,314,1021,1340,1633,1845,1991,2153,2355,2520,2733,2904,3071,3309,3535,3694,3907,4074,4267,4417,4588,5024,5189, 84,118,318,281,155,111,152,162,155,140,103,138,188,147,137,159,142,133,109,132,134,132,136, 56,237,432,1339,1621,1788,1956,2143,2315,2510,2660,2836,3042,3259,3456,3672,3853,4049,4207,4376,4549,4722,5156, 97,77,589,1,12,57,35,10,40,10,73,68,29,50,79,22,54,25,60,41,39,302,33, 0,0,249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 55,65,69,71,76,80,84,86,88,91,93,98,99,100,101,105,106,112,113,115,123,125,127,130,152,237,253,260,267,273,275,279,282,285,287,289,293,294,297,306,313,432,440,442,444,455,457,461,463,467,471,472,474,478,497,498,500,502,504,505,509,513,515,524,528,529,531,534,538,549,553,554,615,623,625,633,636,645,655,657,659,662,664,671,672,673,679,682,684,686,689,692,696,697,702,704,705,713,714,721,724,726,728,730,735,740,742,744,748,753,757,760,762,766,768,771,772,776,777,778,782,784,785,796,808,812,814,818,821,824,825,828,831,834,837,838,839,841,844,847,852,857,863,875,881,883,889,898,899,901,903,907,909,911,913,916,918,923,925,927,929,931,934,936,938,941,950,959,963,965,967,968,970,975,978,984,999,1002,1004,1020,1339,1621,1624,1626,1630,1632,1788,1790,1795,1797,1798,1799,1803,1804,1810,1818,1822,1844,1956,1962,1969,1981,1984,1987,1990,2143,2148,2152,2315,2317,2320,2324,2327,2330,2346,2354,2510,2516,2519,2660,2689,2691,2698,2699,2711,2718,2732,2836,2842,2849,2853,2855,2860,2863,2865,2868,2874,2876,2879,2883,2891,2895,2897,2901,2903,3042,3052,3056,3058,3060,3062,3064,3068,3070,3259,3262,3268,3270,3271,3273,3274,3278,3280,3285,3299,3308,3424,3456,3457,3460,3468,3471,3472,3475,3476,3488,3490,3491,3494,3496,3498,3526,3529,3534,3672,3674,3685,3688,3690,3693,3853,3855,3856,3871,3872,3874,3878,3886,3888,3890,3891,3898,3904,3906,4049,4052,4057,4068,4073,4207,4209,4218,4223,4226,4234,4239,4244,4249,4255,4266,4376,4383,4390,4403,4416,4549,4552,4559,4562,4566,4569,4570,4573,4575,4581,4582,4585,4587,4722,4725,4733,4736,4738,4741,4744,4746,4751,4753,4759,4761,4762,4765,4767,4770,4771,4773,4775,4779,4781,4782,4786,4787,4790,4791,4794,4796,4799,4801,4805,4806,4811,4812,4814,4816,4822,4826,4830,4838,4851,4859,4862,4915,4924,4937,4942,4944,4961,4963,4967,4970,4973,4976,4980,4983,4989,4993,4995,4998,5008,5011,5023,5156,5170,5172,5176,5178,5183,5188,5325,5341,5344,5346,5350,5372,5376,5377,5382, +chr19 47514810 47540310 m84008_230107_003043_s1/189797755/ccs 1049,1144,1332,1495,1642,1853,2007,2158,2350,2524,2871,3040,3203,3450,3768,3934,4124,4281,4451,4644,4914,5121,5318,5496,5665,5830,6015,6247,6498,6659,6872,7025,7231,7419,7673,7896,8110,8270,8453,8631,8775,8991,9174,9371,9571,9763,9971,10170,10352,10515,10721,10901,11071,11430,11609,11791,11989,12165,12366,12567,12753,12944,13141,13331,13546,13707,14061,14260,14470,14668,14870,15118,15273,15450,15656,15820,16016,16183,16375,16566,16772,16909,17136,17345,17569,17775,18159,18362,18531,18749,18916,19109,19302,19516,19751,19897,20074,20268,20475,20636,20836,21024,21211,21420,21563,21752,21925,22094,22358,22563,22723,22922,23103,23314,23474,23670,23865,24099,24292,24437,24622,24787,25012,25174, 94,142,109,143,129,153,116,135,173,290,131,126,165,296,138,189,137,140,172,269,147,116,125,133,153,135,168,136,99,115,143,175,134,157,94,112,84,124,147,131,172,147,160,152,180,151,129,118,144,205,134,122,300,142,139,179,175,178,138,123,121,116,104,131,133,316,146,123,142,149,134,140,129,138,112,155,166,131,145,148,134,148,150,145,176,339,156,130,154,149,141,144,151,141,121,151,155,137,146,172,153,165,169,142,144,140,132,157,117,101,147,134,148,140,154,141,141,122,121,154,145,155,128,154, 147,1143,1286,1441,1638,1771,2006,2123,2293,2523,2814,3002,3166,3368,3746,3906,4123,4261,4421,4623,4913,5061,5237,5443,5629,5818,5965,6183,6383,6597,6774,7015,7200,7365,7576,7767,8008,8194,8394,8600,8762,8947,9138,9334,9523,9751,9914,10100,10288,10496,10720,10855,11023,11371,11572,11748,11970,12164,12343,12504,12690,12874,13060,13245,13462,13679,14023,14207,14383,14612,14817,15004,15258,15402,15588,15768,15975,16182,16314,16520,16714,16906,17057,17286,17490,17745,18114,18315,18492,18685,18898,19057,19253,19453,19657,19872,20048,20229,20405,20621,20808,20989,21189,21380,21562,21707,21892,22057,22251,22475,22664,22870,23056,23251,23454,23628,23811,24006,24221,24413,24591,24767,24942,25140,25328, 902,1,46,54,4,82,1,35,57,1,57,38,37,82,22,28,1,20,30,21,1,60,81,53,36,12,50,64,115,62,98,10,31,54,97,129,102,76,59,31,13,44,36,37,48,12,57,70,64,19,1,46,48,59,37,43,19,1,23,63,63,70,81,86,84,28,38,53,87,56,53,114,15,48,68,52,41,1,61,46,58,3,79,59,79,30,45,47,39,64,18,52,49,63,94,25,26,39,70,15,28,35,22,40,1,45,33,37,107,88,59,52,47,63,20,42,54,93,71,24,31,20,70,34,38, 250,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,243,0,0,0,0,0,0,0, 11,18,147,160,166,168,172,176,177,179,183,202,203,205,207,209,210,214,218,229,233,236,239,243,254,258,259,266,269,278,280,286,291,292,295,302,305,307,320,328,338,341,350,360,364,367,369,376,378,384,418,419,426,429,431,433,440,445,449,453,458,462,465,467,471,473,476,477,481,482,483,489,501,513,517,519,523,526,529,530,533,536,539,543,546,549,552,562,568,586,588,594,603,604,606,608,612,614,616,618,621,646,655,664,668,670,672,675,689,716,718,720,723,725,729,730,746,747,750,752,759,795,809,816,817,819,821,823,825,828,829,830,836,838,840,841,843,851,855,857,860,864,872,876,878,879,881,899,901,906,908,910,911,915,918,920,922,926,932,942,945,947,950,953,955,956,960,969,979,981,989,996,998,1023,1048,1143,1286,1312,1327,1331,1441,1443,1463,1467,1470,1472,1475,1478,1481,1484,1485,1488,1494,1638,1641,1771,1777,1780,1791,1808,1811,1815,1818,1822,1824,1826,1829,1830,1833,1852,2006,2123,2126,2129,2139,2142,2148,2150,2153,2157,2293,2295,2300,2308,2310,2312,2315,2317,2320,2324,2330,2333,2335,2339,2341,2343,2347,2349,2523,2814,2831,2834,2838,2840,2870,3002,3006,3010,3018,3024,3039,3079,3166,3169,3191,3197,3199,3202,3368,3384,3387,3423,3425,3430,3434,3449,3746,3748,3751,3753,3767,3906,3922,3930,3933,4123,4261,4265,4268,4280,4421,4428,4432,4438,4443,4450,4502,4595,4623,4633,4643,4913,5061,5071,5073,5075,5076,5081,5083,5089,5099,5100,5104,5106,5109,5120,5237,5241,5243,5247,5250,5258,5262,5267,5271,5274,5275,5277,5279,5281,5295,5302,5304,5317,5443,5468,5470,5475,5476,5482,5489,5491,5495,5629,5662,5664,5714,5768,5796,5818,5823,5824,5829,5965,5966,5972,5984,5996,6006,6008,6009,6011,6013,6014,6183,6187,6190,6197,6200,6203,6208,6210,6219,6224,6226,6230,6233,6237,6240,6243,6246,6383,6404,6408,6411,6428,6433,6437,6440,6474,6488,6497,6597,6600,6626,6631,6647,6654,6658,6774,6790,6802,6805,6809,6815,6817,6827,6830,6835,6869,6871,6901,7015,7017,7019,7024,7200,7202,7206,7208,7222,7228,7230,7365,7369,7371,7376,7383,7386,7398,7400,7402,7404,7409,7418,7576,7580,7590,7591,7596,7609,7611,7617,7618,7621,7622,7627,7646,7657,7662,7666,7669,7672,7767,7770,7776,7778,7781,7785,7835,7837,7839,7849,7854,7856,7859,7863,7866,7867,7869,7874,7878,7880,7885,7887,7888,7891,7895,7978,8008,8030,8032,8039,8045,8052,8054,8057,8072,8073,8077,8080,8083,8084,8089,8109,8194,8198,8210,8211,8227,8230,8232,8234,8238,8241,8242,8243,8245,8247,8249,8254,8259,8261,8265,8269,8394,8396,8398,8404,8405,8406,8411,8452,8600,8604,8605,8621,8623,8626,8630,8762,8771,8774,8947,8950,8958,8963,8969,8972,8985,8990,9018,9138,9152,9155,9157,9162,9170,9173,9334,9336,9339,9352,9354,9356,9370,9523,9525,9527,9529,9541,9544,9547,9551,9552,9555,9557,9562,9567,9570,9751,9758,9762,9817,9914,9917,9919,9935,9937,9939,9967,9970,10100,10101,10103,10107,10114,10117,10121,10127,10129,10131,10153,10158,10169,10288,10301,10339,10351,10496,10514,10720,10855,10861,10872,10877,10882,10900,10966,10968,11023,11056,11061,11063,11068,11070,11371,11389,11395,11429,11572,11593,11602,11604,11607,11608,11748,11769,11778,11781,11786,11790,11970,11988,12164,12343,12352,12360,12365,12504,12515,12547,12550,12553,12564,12566,12690,12713,12716,12719,12733,12736,12752,12874,12879,12899,12901,12905,12909,12919,12924,12928,12933,12938,12943,13060,13062,13065,13067,13069,13073,13074,13075,13077,13080,13081,13083,13087,13093,13096,13098,13102,13104,13109,13119,13126,13140,13245,13248,13262,13266,13269,13272,13273,13278,13291,13294,13296,13299,13303,13319,13324,13325,13327,13330,13462,13465,13469,13471,13475,13478,13480,13488,13492,13494,13517,13519,13545,13679,13690,13692,13694,13697,13698,13700,13706,14023,14057,14060,14207,14209,14212,14233,14238,14259,14383,14389,14399,14401,14417,14446,14450,14451,14458,14461,14469,14612,14625,14634,14651,14656,14661,14662,14667,14708,14817,14824,14830,14837,14842,14845,14849,14851,14855,14860,14863,14866,14869,15004,15033,15034,15037,15040,15042,15043,15057,15061,15067,15070,15079,15089,15117,15258,15267,15272,15402,15426,15433,15436,15443,15449,15588,15593,15599,15602,15625,15628,15637,15642,15649,15655,15768,15786,15789,15791,15794,15819,15865,15975,15978,16015,16182,16314,16331,16333,16338,16351,16353,16362,16368,16374,16520,16526,16528,16531,16535,16537,16538,16546,16550,16565,16714,16732,16738,16739,16742,16744,16763,16771,16906,16908,16936,17057,17060,17069,17074,17077,17088,17099,17103,17107,17109,17118,17121,17127,17131,17133,17135,17286,17298,17301,17303,17305,17308,17310,17318,17323,17324,17326,17327,17332,17334,17339,17340,17344,17490,17492,17497,17505,17508,17514,17518,17519,17520,17525,17528,17530,17531,17537,17539,17546,17549,17550,17555,17559,17561,17564,17568,17745,17748,17752,17761,17765,17769,17774,18114,18130,18134,18135,18138,18154,18158,18315,18318,18332,18334,18337,18338,18340,18343,18344,18347,18353,18361,18492,18502,18506,18516,18522,18524,18528,18530,18685,18686,18691,18692,18728,18739,18748,18898,18901,18904,18909,18915,19057,19063,19068,19075,19081,19091,19095,19108,19253,19256,19262,19271,19301,19334,19453,19457,19474,19478,19480,19485,19487,19490,19492,19496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+chr19 47514827 47529737 m84039_230404_003541_s3/181208974/ccs 894,1239,1538,1912,2234,2591,2779,3021,3134,3237,3440,3628,3942,4271,4461,4634,5117,5486,5869,6070,6278,6449,6645,6829,7024,7360,7595,7748,7910,8104,8257,8412,8616,8814,9048,9166,9392,9612,9784,9982,10140,10237,10355,10531,10766,10986,11174,11387,11585,11780,11982,12152,12230,12336,12692,12873,13063,13403,13576,13736,13941,14113,14318,14525, 136,284,349,296,350,144,197,112,84,171,150,305,299,151,124,453,355,359,147,150,149,159,127,148,307,154,139,140,193,148,154,180,197,128,117,178,170,138,127,139,96,78,140,222,188,187,212,175,171,191,169,77,86,349,165,162,287,164,155,164,151,170,192,168, 128,1030,1523,1887,2208,2584,2735,2976,3133,3218,3408,3590,3933,4241,4422,4585,5087,5472,5845,6016,6220,6427,6608,6772,6977,7331,7514,7734,7888,8103,8252,8411,8592,8813,8942,9165,9344,9562,9750,9911,10121,10236,10315,10495,10753,10954,11173,11386,11562,11756,11971,12151,12229,12316,12685,12857,13035,13350,13567,13731,13900,14092,14283,14510,14693, 766,209,15,25,26,7,44,45,1,19,32,38,9,30,39,49,30,14,24,54,58,22,37,57,47,29,81,14,22,1,5,1,24,1,106,1,48,50,34,71,19,1,40,36,13,32,1,1,23,24,11,1,1,20,7,16,28,53,9,5,41,21,35,15,39, 251,244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 1,128,143,155,160,162,164,166,185,186,190,192,193,201,203,212,216,219,222,237,241,242,275,278,303,311,313,320,323,332,342,349,351,358,366,376,384,400,401,408,411,413,415,417,422,427,429,431,435,440,455,458,459,465,469,471,495,501,505,508,511,512,515,518,525,526,528,531,534,544,550,562,568,585,588,590,596,603,623,628,637,646,654,657,662,671,686,689,729,732,733,734,739,741,789,791,796,807,812,820,823,829,831,834,835,837,839,844,854,858,861,863,873,877,881,893,1030,1033,1034,1041,1047,1049,1051,1058,1062,1073,1076,1135,1143,1168,1170,1172,1200,1202,1203,1212,1214,1216,1219,1235,1238,1523,1525,1528,1530,1533,1537,1887,1889,1911,2208,2217,2220,2222,2228,2233,2584,2590,2735,2778,2976,2978,2981,2989,2993,2996,3011,3013,3020,3133,3218,3223,3232,3236,3408,3413,3438,3439,3590,3595,3627,3933,3938,3941,4241,4251,4255,4258,4259,4262,4270,4422,4440,4451,4460,4585,4587,4604,4613,4626,4633,5087,5116,5472,5478,5481,5485,5845,5859,5862,5868,6016,6024,6069,6220,6223,6227,6230,6233,6236,6244,6246,6259,6270,6277,6427,6445,6448,6608,6616,6625,6644,6772,6778,6792,6795,6799,6805,6812,6817,6821,6828,6977,6981,6983,6987,6990,6992,7000,7005,7007,7009,7014,7023,7331,7336,7339,7352,7355,7359,7514,7533,7538,7540,7544,7574,7594,7734,7741,7744,7747,7802,7888,7909,8103,8252,8256,8411,8592,8597,8615,8813,8942,8944,8950,8958,8961,8982,9038,9047,9165,9344,9346,9348,9362,9364,9391,9562,9581,9611,9750,9754,9762,9774,9777,9783,9911,9931,9939,9943,9946,9959,9962,9963,9975,9978,9981,10121,10129,10135,10139,10236,10315,10318,10326,10331,10339,10343,10346,10349,10354,10441,10495,10498,10500,10506,10523,10526,10527,10530,10753,10765,10954,10958,10961,10967,10968,10970,10977,10985,11173,11386,11562,11565,11569,11584,11756,11763,11771,11774,11779,11971,11981,12151,12229,12316,12335,12685,12691,12857,12859,12865,12872,13035,13062,13350,13360,13374,13377,13380,13391,13402,13567,13575,13731,13735,13900,13902,13929,13939,13940,14092,14112,14283,14294,14303,14316,14317,14510,14516,14524,14693,14710,14712,14731,14906,14907,14909,14911,14912, +chr19 47515224 47527520 m54329U_210323_190418/97651167/ccs 431,613,965,1168,1328,1480,1712,1959,2096,2273,2450,2647,2795,2971,3141,3324,3721,3955,4127,4340,4517,4740,4957,5183,5341,5539,5757,5958,6176,6330,6486,6676,6891,7084,7277,7478,7676,7877,8051,8224,8401,8607,8824,8973,9183,9372,9581,9927,10110,10275,10446,10623,10821,10953,11217,11356,11433,11766,11961, 120,257,117,151,151,116,98,127,130,135,118,137,127,135,153,139,134,94,108,116,114,122,129,118,115,133,121,121,110,150,101,131,136,106,107,129,133,134,154,147,162,124,130,159,120,114,281,105,124,166,129,131,128,119,138,76,219,97,128, 551,870,1082,1319,1479,1596,1810,2086,2226,2408,2568,2784,2922,3106,3294,3463,3855,4049,4235,4456,4631,4862,5086,5301,5456,5672,5878,6079,6286,6480,6587,6807,7027,7190,7384,7607,7809,8011,8205,8371,8563,8731,8954,9132,9303,9486,9862,10032,10234,10441,10575,10754,10949,11072,11355,11432,11652,11863,12089, 62,95,86,9,1,116,149,10,47,42,79,11,49,35,30,258,100,78,105,61,109,95,97,40,83,85,80,97,44,6,89,84,57,87,94,69,68,40,19,30,44,93,19,51,69,95,65,78,41,5,48,67,4,145,1,1,114,98,53, 0,0,0,0,0,0,246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,242,0,0,0,0,0, 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+chr19 47515325 47525397 m64076_210328_012155/64620793/ccs 315,745,1096,1234,1386,1525,1738,1936,2353,2746,2939,3096,3293,3483,3629,3807,3955,4109,4337,4732,4908,5063,5234,5480,5602,5830,6013,6217,6389,6554,6748,6921,7070,7218,7430,7612,7771,7939,8136,8321,8503,8686,8869,9005,9235,9398,9592,9781, 101,197,122,117,129,129,123,107,107,124,81,129,134,145,133,109,153,107,81,106,101,121,132,99,86,103,98,77,108,145,134,123,134,91,96,116,134,162,147,138,152,129,132,165,116,138,139,118, 416,942,1218,1351,1515,1654,1861,2043,2460,2870,3020,3225,3427,3628,3762,3916,4108,4216,4418,4838,5009,5184,5366,5579,5688,5933,6111,6294,6497,6699,6882,7044,7204,7309,7526,7728,7905,8101,8283,8459,8655,8815,9001,9170,9351,9536,9731,9899, 329,154,16,35,10,84,75,310,286,69,76,68,56,1,45,39,1,121,314,70,54,50,114,23,142,80,106,95,57,49,39,26,14,121,86,43,34,35,38,44,31,54,4,65,47,56,50,77, 0,0,0,0,0,0,0,243,0,0,0,0,0,0,0,0,0,0,244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 8,11,14,15,18,21,24,27,28,31,34,37,42,47,53,66,73,75,81,93,95,123,128,133,142,155,157,159,162,167,170,172,176,195,197,204,205,206,208,209,211,213,217,218,219,228,232,233,234,235,238,239,240,244,245,247,250,251,252,253,254,256,257,260,264,266,268,274,276,277,279,282,283,285,288,289,290,296,303,305,308,310,312,314,416,433,436,439,441,444,446,447,449,451,453,455,457,460,469,470,472,473,478,479,480,487,489,490,492,497,498,503,514,516,519,523,525,527,530,532,535,542,617,620,622,629,635,637,639,641,643,645,647,648,649,651,653,670,671,674,676,677,679,681,685,687,698,699,703,704,705,709,712,721,723,725,744,942,956,963,968,971,974,976,977,981,985,987,990,992,994,995,996,998,1000,1001,1002,1004,1005,1007,1011,1013,1014,1015,1018,1019,1022,1023,1025,1027,1028,1033,1036,1038,1041,1043,1045,1047,1053,1062,1063,1064,1068,1069,1070,1073,1080,1095,1218,1225,1233,1351,1374,1385,1515,1520,1524,1654,1656,1663,1668,1676,1683,1689,1699,1709,1720,1721,1725,1737,1861,1863,1865,1867,1868,1870,1872,1873,1884,1885,1886,1890,1892,1894,1895,1896,1899,1900,1902,1904,1908,1909,1912,1914,1917,1919,1921,1924,1927,1928,1933,1935,1970,2043,2053,2054,2056,2059,2061,2064,2066,2069,2075,2077,2080,2084,2088,2090,2092,2093,2096,2106,2110,2132,2198,2201,2204,2210,2211,2213,2216,2218,2223,2225,2226,2227,2229,2233,2235,2237,2240,2241,2243,2247,2251,2253,2255,2257,2259,2261,2263,2265,2268,2269,2271,2286,2288,2290,2291,2292,2295,2296,2297,2298,2303,2304,2309,2310,2311,2313,2314,2316,2328,2330,2331,2333,2337,2338,2341,2344,2345,2348,2352,2460,2471,2472,2474,2475,2476,2479,2482,2483,2484,2486,2488,2489,2490,2493,2494,2500,2501,2505,2507,2508,2509,2512,2513,2518,2523,2525,2527,2529,2532,2536,2538,2540,2543,2545,2547,2553,2619,2623,2625,2645,2657,2658,2661,2665,2666,2669,2672,2673,2676,2677,2683,2684,2685,2688,2689,2691,2692,2695,2696,2697,2699,2702,2728,2731,2736,2745,2870,2874,2876,2878,2887,2890,2892,2894,2898,2901,2902,2903,2922,2934,2938,3020,3027,3029,3032,3035,3041,3043,3047,3050,3051,3052,3053,3056,3058,3059,3070,3075,3077,3079,3081,3089,3093,3095,3225,3226,3230,3231,3234,3236,3239,3248,3251,3253,3256,3258,3261,3262,3264,3265,3267,3269,3270,3272,3273,3277,3278,3281,3283,3284,3286,3289,3292,3427,3438,3448,3452,3453,3455,3456,3459,3463,3466,3468,3470,3472,3473,3475,3479,3482,3628,3762,3765,3777,3787,3797,3799,3804,3805,3806,3916,3925,3936,3947,3949,3954,4108,4216,4220,4222,4226,4228,4229,4231,4234,4236,4237,4238,4240,4243,4244,4246,4247,4251,4255,4258,4267,4268,4273,4275,4276,4278,4280,4284,4286,4288,4290,4293,4294,4296,4297,4302,4306,4309,4311,4315,4317,4320,4325,4332,4336,4418,4422,4433,4436,4442,4444,4445,4450,4473,4476,4479,4493,4541,4554,4576,4578,4581,4586,4587,4588,4590,4593,4594,4596,4602,4604,4605,4606,4609,4611,4612,4614,4615,4617,4619,4620,4622,4625,4627,4628,4630,4631,4641,4642,4647,4651,4653,4655,4658,4662,4663,4664,4665,4667,4670,4672,4674,4678,4686,4695,4698,4701,4702,4704,4705,4707,4709,4712,4714,4715,4719,4721,4723,4728,4731,4838,4842,4846,4855,4857,4858,4859,4862,4864,4865,4868,4869,4894,4907,5009,5011,5014,5015,5017,5026,5029,5030,5032,5035,5036,5038,5040,5041,5043,5045,5046,5051,5060,5062,5184,5187,5190,5192,5195,5196,5199,5200,5202,5205,5208,5211,5216,5218,5228,5230,5233,5366,5367,5369,5371,5374,5377,5380,5382,5383,5388,5393,5394,5396,5398,5399,5405,5410,5412,5413,5415,5416,5418,5423,5425,5429,5430,5432,5433,5434,5437,5440,5441,5445,5449,5450,5452,5454,5459,5461,5465,5467,5477,5479,5579,5584,5601,5688,5690,5708,5713,5719,5721,5725,5729,5731,5735,5737,5738,5740,5742,5745,5757,5759,5761,5766,5768,5769,5774,5777,5778,5780,5782,5785,5789,5792,5793,5799,5806,5808,5812,5816,5829,5933,5938,5942,5948,5950,5954,5955,5960,5970,5971,5973,5975,5980,5982,5985,5989,5991,5992,5995,6000,6003,6012,6111,6114,6116,6122,6124,6128,6132,6141,6143,6145,6146,6147,6150,6153,6155,6156,6157,6160,6164,6168,6169,6170,6172,6174,6176,6178,6180,6183,6184,6197,6201,6203,6205,6215,6216,6294,6301,6303,6307,6308,6311,6315,6319,6321,6333,6336,6337,6341,6344,6347,6349,6353,6356,6357,6358,6359,6363,6365,6366,6368,6372,6375,6380,6382,6385,6388,6407,6426,6497,6506,6508,6511,6513,6516,6521,6523,6525,6530,6533,6539,6549,6551,6553,6699,6702,6706,6708,6712,6714,6718,6732,6734,6736,6747,6882,6886,6889,6901,6904,6920,7044,7049,7050,7054,7069,7121,7204,7209,7210,7213,7217,7309,7314,7315,7320,7343,7348,7351,7354,7357,7358,7362,7364,7367,7371,7375,7377,7382,7383,7386,7388,7393,7395,7396,7398,7399,7403,7404,7406,7411,7414,7416,7417,7419,7420,7429,7526,7545,7548,7552,7554,7558,7561,7563,7565,7566,7569,7573,7582,7586,7589,7590,7592,7593,7611,7665,7728,7736,7739,7743,7747,7750,7752,7754,7756,7762,7765,7770,7905,7924,7933,7936,7938,8101,8102,8107,8112,8116,8117,8119,8133,8135,8283,8286,8309,8320,8459,8462,8470,8475,8478,8481,8484,8486,8488,8492,8502,8655,8664,8682,8685,8815,8818,8820,8823,8826,8831,8840,8854,8864,8866,8868,9001,9004,9170,9173,9176,9177,9179,9182,9184,9187,9189,9192,9194,9198,9200,9203,9207,9213,9215,9216,9221,9222,9228,9229,9231,9233,9234,9351,9361,9366,9368,9371,9373,9375,9379,9381,9384,9389,9391,9393,9395,9397,9536,9544,9551,9553,9555,9557,9559,9561,9562,9565,9566,9568,9569,9573,9586,9589,9591,9731,9739,9745,9749,9753,9755,9756,9758,9761,9763,9766,9780,9899,9906,9909,9912,9915,9921,9923,9927,9930,9938,9940,9943,9945,9952,9965,9975, +chr19 47515526 47530633 m64076_210328_012155/70713469/ccs 110,243,659,1164,1400,1629,1798,1959,2203,2360,2546,2727,2886,3079,3233,3399,3593,3778,3930,4139,4334,4506,4687,4882,5097,5292,5439,5647,5867,6037,6177,6386,6548,6724,6950,7096,7240,7397,7598,7743,7940,8094,8313,8519,8743,8832,9049,9302,9483,9667,9856,10069,10224,10448,10583,10798,10983,11172,11417,11602,11788,12208,12418,12579,12786,12978,13121,13370,13554,13752,13971,14172,14375,14523,14733,14913, 116,415,498,215,224,163,137,135,127,158,123,156,138,142,160,149,136,120,140,139,114,180,135,125,129,107,148,131,124,139,143,128,142,147,145,89,127,143,135,149,127,165,117,135,88,179,176,117,110,109,112,123,149,132,153,133,157,176,104,91,137,129,143,148,125,132,130,132,136,94,125,105,101,178,146,153, 226,658,1157,1379,1624,1792,1935,2094,2330,2518,2669,2883,3024,3221,3393,3548,3729,3898,4070,4278,4448,4686,4822,5007,5226,5399,5587,5778,5991,6176,6320,6514,6690,6871,7095,7185,7367,7540,7733,7892,8067,8259,8430,8654,8831,9011,9225,9419,9593,9776,9968,10192,10373,10580,10736,10931,11140,11348,11521,11693,11925,12337,12561,12727,12911,13110,13251,13502,13690,13846,14096,14277,14476,14701,14879,15066, 17,1,7,21,5,6,24,109,30,28,58,3,55,12,6,45,49,32,69,56,58,1,60,90,66,40,60,89,46,1,66,34,34,79,1,55,30,58,10,48,27,54,89,89,1,38,77,64,74,80,101,32,75,3,62,52,32,69,81,95,283,81,18,59,67,11,119,52,62,125,76,98,47,32,34,16, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,250,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 40,41,43,46,50,53,56,59,61,63,69,72,74,77,78,79,81,84,85,86,91,93,103,105,109,226,229,234,237,239,242,658,1157,1159,1163,1379,1399,1624,1628,1792,1797,1935,1948,1952,1955,1958,2094,2099,2106,2108,2116,2125,2129,2130,2131,2133,2136,2137,2140,2144,2147,2151,2153,2154,2156,2160,2161,2164,2174,2183,2193,2199,2200,2202,2330,2332,2335,2336,2337,2339,2342,2343,2354,2356,2358,2359,2518,2521,2524,2542,2545,2669,2670,2673,2680,2683,2685,2687,2691,2693,2700,2702,2703,2705,2707,2714,2719,2721,2726,2883,2885,3024,3028,3029,3030,3036,3043,3047,3048,3050,3052,3078,3221,3232,3393,3398,3548,3553,3555,3558,3562,3565,3566,3569,3578,3581,3583,3585,3587,3592,3729,3732,3739,3747,3749,3753,3754,3755,3758,3759,3761,3766,3767,3769,3771,3774,3777,3898,3900,3902,3906,3929,4018,4070,4072,4076,4082,4088,4098,4101,4103,4109,4112,4117,4121,4122,4125,4128,4132,4138,4278,4284,4285,4311,4313,4315,4317,4328,4331,4333,4448,4451,4460,4465,4479,4484,4485,4488,4491,4494,4502,4505,4686,4822,4824,4828,4830,4832,4833,4835,4837,4838,4839,4841,4843,4846,4847,4851,4852,4853,4854,4855,4858,4860,4861,4864,4865,4867,4874,4877,4881,5007,5025,5032,5044,5045,5051,5061,5087,5089,5096,5226,5227,5230,5231,5235,5237,5238,5242,5248,5252,5265,5269,5272,5273,5275,5277,5287,5291,5399,5407,5409,5413,5430,5434,5438,5587,5597,5604,5606,5610,5621,5625,5627,5646,5703,5778,5784,5790,5791,5793,5794,5805,5808,5811,5813,5814,5829,5831,5837,5838,5840,5843,5845,5847,5848,5850,5851,5853,5854,5856,5866,5991,5996,6002,6004,6009,6015,6017,6020,6036,6176,6320,6324,6350,6352,6355,6356,6357,6360,6376,6378,6385,6514,6518,6528,6532,6534,6536,6538,6541,6542,6547,6690,6693,6695,6699,6705,6716,6723,6790,6871,6878,6882,6942,6949,7095,7185,7186,7189,7191,7196,7198,7201,7202,7207,7208,7210,7215,7224,7228,7231,7233,7239,7367,7369,7373,7390,7394,7396,7433,7540,7543,7545,7547,7551,7552,7554,7555,7558,7560,7566,7567,7569,7572,7574,7578,7581,7597,7733,7740,7742,7892,7905,7910,7912,7920,7925,7936,7939,8067,8071,8086,8089,8092,8093,8259,8262,8265,8276,8284,8287,8289,8291,8295,8302,8305,8312,8430,8432,8435,8444,8451,8453,8457,8458,8461,8462,8463,8464,8467,8470,8472,8477,8481,8483,8485,8488,8491,8494,8497,8503,8506,8509,8518,8654,8661,8665,8667,8669,8671,8675,8678,8681,8683,8685,8688,8704,8714,8721,8725,8735,8742,8831,9011,9025,9026,9027,9032,9033,9035,9037,9048,9225,9231,9237,9244,9246,9248,9249,9253,9255,9257,9260,9263,9265,9272,9275,9281,9285,9288,9289,9296,9301,9419,9425,9430,9432,9433,9435,9445,9447,9449,9455,9457,9458,9461,9477,9480,9482,9593,9602,9609,9615,9617,9627,9629,9642,9645,9647,9653,9658,9666,9776,9778,9780,9782,9784,9803,9806,9808,9810,9813,9816,9817,9823,9824,9825,9826,9828,9834,9835,9838,9840,9841,9846,9852,9855,9968,9969,9970,9972,9975,9980,9991,9994,9997,10002,10007,10021,10022,10027,10028,10040,10042,10044,10046,10048,10051,10052,10054,10066,10068,10192,10200,10205,10210,10214,10216,10220,10223,10373,10378,10380,10383,10385,10388,10390,10392,10398,10400,10402,10406,10408,10410,10414,10416,10447,10580,10582,10736,10753,10756,10761,10763,10766,10769,10771,10774,10775,10785,10787,10790,10794,10797,10931,10956,10972,10978,10982,11140,11145,11149,11152,11154,11160,11161,11163,11166,11167,11171,11348,11362,11366,11368,11373,11377,11379,11381,11384,11388,11391,11392,11394,11395,11397,11398,11400,11416,11521,11537,11538,11555,11558,11561,11562,11565,11567,11569,11571,11573,11577,11580,11589,11590,11594,11598,11601,11693,11701,11716,11719,11722,11724,11733,11735,11739,11741,11742,11745,11748,11749,11751,11753,11754,11758,11760,11763,11765,11766,11769,11778,11781,11783,11784,11785,11787,11925,11930,11932,11934,11936,11938,11939,11942,11944,11946,11950,11954,11957,11959,11962,11964,11967,11971,11972,11974,11975,11979,11981,11982,11983,11986,11990,11991,11993,11996,11999,12000,12001,12004,12006,12007,12011,12015,12019,12022,12024,12033,12035,12036,12039,12046,12059,12062,12092,12094,12096,12097,12104,12110,12111,12120,12123,12125,12126,12129,12131,12134,12135,12139,12142,12145,12147,12150,12157,12163,12171,12174,12175,12190,12194,12202,12207,12337,12340,12347,12352,12356,12357,12359,12363,12366,12367,12372,12376,12377,12384,12392,12395,12397,12417,12561,12571,12575,12578,12727,12731,12734,12738,12742,12743,12746,12753,12762,12768,12770,12785,12911,12917,12924,12933,12934,12936,12939,12943,12945,12949,12973,12977,13110,13116,13119,13120,13154,13251,13255,13256,13258,13267,13270,13273,13275,13276,13282,13284,13286,13287,13291,13293,13296,13299,13301,13302,13304,13305,13307,13310,13312,13324,13330,13332,13334,13336,13337,13339,13341,13343,13345,13347,13350,13354,13356,13360,13363,13365,13369,13502,13520,13522,13523,13525,13527,13529,13530,13535,13538,13540,13543,13545,13553,13690,13692,13695,13697,13698,13702,13709,13711,13714,13726,13728,13731,13733,13740,13747,13751,13846,13849,13852,13855,13861,13864,13867,13872,13874,13876,13880,13882,13886,13887,13888,13891,13893,13897,13899,13905,13906,13909,13912,13913,13917,13919,13920,13923,13925,13926,13927,13929,13939,13941,13943,13945,13946,13951,1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+chr19 47515617 47528492 m84039_230404_003541_s3/134221345/ccs 148,325,767,1029,1213,1473,1670,1883,2025,2138,2338,2677,2911,3047,3249,3380,3577,3776,3962,4111,4318,4488,4650,4840,4982,5310,5651,5815,6022,6237,6420,6599,6744,6951,7097,7298,7454,7636,7814,7988,8171,8363,8623,8862,9010,9192,9367,9524,9727,9895,10069,10239,10390,10620,10922,11067,11248,11464,11650,11859,12055,12293,12396,12575, 111,119,109,172,128,85,100,124,112,173,92,112,123,111,130,79,75,136,104,114,111,137,154,139,128,113,102,122,102,122,134,138,142,100,155,124,131,143,131,113,98,126,117,97,101,126,116,119,116,162,115,150,124,144,121,112,163,106,150,130,114,102,149,143, 112,259,444,876,1201,1341,1558,1770,2007,2137,2311,2430,2789,3034,3158,3379,3459,3652,3912,4066,4225,4429,4625,4804,4979,5110,5423,5753,5937,6124,6359,6554,6737,6886,7051,7252,7422,7585,7779,7945,8101,8269,8489,8740,8959,9111,9318,9483,9643,9843,10057,10184,10389,10514,10764,11043,11179,11411,11570,11800,11989,12169,12395,12545,12718, 36,66,323,153,12,132,112,113,18,1,27,247,122,13,91,1,118,124,50,45,93,59,25,36,3,200,228,62,85,113,61,45,7,65,46,46,32,51,35,43,70,94,134,122,51,81,49,41,84,52,12,55,1,106,158,24,69,53,80,59,66,124,1,30,33, 0,0,0,0,0,242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 0,2,19,112,136,147,217,259,261,263,278,288,291,294,307,310,313,317,324,444,447,450,455,460,462,465,466,470,471,478,481,487,492,526,528,585,600,622,623,625,626,643,645,649,651,653,659,663,668,671,674,677,680,683,684,688,690,693,695,697,698,707,710,714,716,718,721,722,725,726,728,730,731,746,748,750,764,766,833,876,877,886,896,899,923,933,934,935,946,964,970,972,975,977,986,1008,1021,1025,1028,1201,1212,1341,1343,1346,1350,1352,1356,1358,1364,1372,1376,1377,1379,1404,1406,1412,1415,1416,1420,1424,1425,1427,1429,1432,1433,1440,1444,1446,1450,1457,1469,1472,1558,1581,1585,1591,1594,1595,1599,1604,1609,1612,1619,1622,1623,1628,1630,1632,1634,1637,1638,1642,1646,1649,1655,1657,1664,1669,1730,1757,1770,1773,1777,1785,1789,1791,1793,1797,1799,1801,1804,1819,1820,1868,1882,2007,2008,2024,2137,2311,2313,2321,2334,2337,2430,2439,2442,2455,2458,2464,2468,2471,2475,2490,2492,2495,2514,2518,2520,2531,2591,2604,2610,2617,2626,2630,2633,2635,2636,2640,2641,2647,2648,2652,2654,2655,2658,2662,2666,2671,2676,2789,2795,2804,2806,2807,2810,2815,2825,2827,2828,2831,2835,2837,2852,2863,2866,2878,2881,2887,2889,2910,3034,3046,3158,3162,3165,3168,3170,3173,3177,3199,3201,3202,3204,3206,3207,3212,3214,3219,3232,3240,3243,3248,3379,3459,3467,3513,3522,3523,3531,3534,3545,3547,3551,3574,3576,3652,3662,3670,3675,3683,3685,3688,3690,3693,3694,3708,3711,3716,3719,3721,3722,3724,3727,3730,3732,3736,3740,3743,3748,3756,3759,3760,3762,3767,3768,3769,3772,3775,3912,3914,3922,3928,3929,3936,3953,3961,4066,4073,4078,4081,4083,4104,4105,4110,4150,4225,4227,4240,4262,4264,4266,4267,4272,4273,4274,4276,4279,4280,4283,4288,4292,4295,4297,4301,4317,4429,4433,4449,4455,4457,4459,4466,4484,4487,4625,4643,4649,4685,4804,4819,4823,4837,4839,4943,4979,4981,5110,5122,5134,5143,5144,5147,5149,5152,5155,5158,5163,5177,5189,5193,5195,5196,5201,5202,5204,5210,5219,5221,5223,5224,5225,5227,5233,5235,5243,5248,5250,5253,5271,5273,5288,5291,5309,5357,5423,5426,5430,5433,5435,5439,5455,5456,5461,5464,5465,5467,5469,5472,5476,5479,5521,5563,5568,5596,5600,5603,5605,5608,5617,5620,5625,5632,5635,5637,5638,5650,5753,5755,5758,5765,5767,5770,5772,5773,5778,5780,5782,5798,5800,5808,5810,5814,5937,5940,5945,5948,5949,5954,5967,5969,5970,5992,5996,6000,6021,6092,6113,6124,6127,6130,6133,6146,6150,6155,6159,6162,6163,6165,6167,6173,6174,6177,6181,6183,6187,6190,6192,6194,6195,6197,6200,6205,6207,6209,6221,6223,6224,6230,6232,6234,6236,6269,6359,6361,6364,6379,6382,6385,6389,6391,6395,6397,6401,6411,6415,6417,6419,6554,6558,6560,6564,6565,6569,6572,6575,6584,6587,6589,6595,6598,6737,6743,6886,6891,6895,6901,6910,6911,6915,6918,6924,6926,6950,7051,7055,7068,7073,7075,7076,7078,7079,7083,7086,7091,7094,7096,7218,7252,7268,7271,7272,7289,7297,7422,7426,7430,7433,7435,7447,7449,7453,7480,7585,7591,7611,7614,7616,7622,7625,7635,7702,7779,7785,7786,7813,7945,7946,7949,7959,7961,7964,7987,8101,8104,8108,8112,8137,8140,8156,8159,8162,8164,8166,8170,8269,8288,8291,8294,8297,8298,8302,8305,8307,8310,8314,8319,8326,8328,8332,8333,8339,8342,8343,8345,8362,8489,8490,8492,8496,8497,8500,8503,8507,8508,8522,8523,8525,8528,8541,8543,8545,8549,8561,8562,8578,8588,8591,8599,8601,8609,8622,8740,8759,8764,8793,8795,8837,8861,8959,8966,8969,8971,8978,8984,8987,8991,9003,9006,9009,9111,9124,9126,9128,9140,9143,9146,9156,9159,9162,9167,9172,9175,9178,9186,9189,9191,9318,9332,9334,9342,9346,9350,9353,9366,9483,9487,9512,9523,9550,9643,9647,9649,9651,9653,9671,9676,9678,9681,9691,9693,9696,9700,9701,9702,9707,9719,9726,9843,9847,9860,9873,9876,9894,10057,10060,10062,10065,10068,10184,10208,10211,10227,10229,10238,10275,10389,10514,10517,10538,10541,10544,10573,10619,10764,10794,10837,10847,10849,10898,10921,11043,11045,11056,11061,11062,11066,11179,11183,11218,11220,11221,11223,11232,11234,11236,11240,11247,11348,11411,11412,11414,11415,11418,11420,11422,11424,11436,11440,11445,11447,11456,11458,11460,11462,11463,11518,11570,11593,11602,11611,11613,11625,11635,11637,11639,11647,11649,11675,11800,11806,11810,11813,11820,11823,11835,11847,11857,11858,11989,12000,12008,12025,12032,12036,12048,12052,12054,12169,12173,12186,12195,12198,12201,12205,12214,12221,12224,12230,12241,12257,12261,12271,12275,12292,12335,12395,12545,12559,12571,12574,12617,12674,12704,12718,12728,12740,12750,12841,12855,12856,12857,12859,12860,12861, 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+chr19 47516423 47523540 m84008_230107_003043_s1/127407090/ccs 215,368,528,692,860,1068,1258,1410,1584,1837,1988,2163,2359,2479,2676,2869,3099,3274,3436,3621,3807,4008,4209,4397,4596,4789,5007,5177,5313,5570,5851,6075,6263,6561, 126,136,138,160,140,141,133,167,127,105,163,122,112,175,172,147,146,146,140,175,136,142,138,166,133,147,114,121,175,131,97,131,262,354, 132,341,504,666,852,1000,1209,1391,1577,1711,1942,2151,2285,2471,2654,2848,3016,3245,3420,3576,3796,3943,4150,4347,4563,4729,4936,5121,5298,5488,5701,5948,6206,6525,6915, 83,27,24,26,8,68,49,19,7,126,46,12,74,8,22,21,83,29,16,45,11,65,59,50,33,60,71,56,15,82,150,127,57,36,1, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 131,158,162,164,169,195,198,207,210,212,214,341,347,352,354,356,362,367,504,508,511,514,515,527,666,669,672,675,681,683,691,852,859,1000,1021,1049,1053,1057,1060,1067,1209,1225,1227,1257,1391,1409,1577,1578,1583,1711,1723,1741,1747,1748,1753,1754,1757,1759,1763,1769,1772,1774,1803,1804,1809,1812,1836,1942,1953,1960,1972,1976,1978,1987,2151,2162,2285,2291,2305,2310,2331,2347,2353,2356,2358,2471,2478,2654,2657,2669,2673,2675,2848,2852,2858,2868,3016,3023,3058,3065,3068,3078,3080,3083,3098,3214,3245,3255,3257,3261,3263,3273,3420,3426,3431,3435,3462,3576,3579,3581,3582,3587,3611,3618,3620,3796,3801,3803,3806,3943,3947,3948,3950,3957,3982,3986,3992,3996,4001,4003,4007,4150,4157,4162,4169,4176,4181,4208,4347,4375,4390,4396,4563,4566,4570,4573,4576,4595,4729,4730,4748,4764,4770,4774,4788,4936,4948,4950,4953,4961,4969,4975,4981,5006,5121,5127,5129,5132,5149,5165,5176,5298,5312,5488,5508,5522,5526,5530,5533,5534,5543,5549,5551,5554,5566,5569,5701,5722,5738,5744,5746,5748,5753,5779,5783,5787,5789,5792,5803,5811,5819,5843,5850,5948,5952,5959,5990,5998,6010,6017,6021,6023,6046,6048,6050,6074,6152,6206,6211,6214,6225,6227,6230,6234,6237,6238,6245,6251,6262,6525,6560,6915,7048,7064, +chr19 47516482 47530674 m84039_230401_031619_s3/178849005/ccs 69,305,438,665,752,894,1104,1243,1384,1580,1995,2124,2316,2416,2573,2723,2863,3058,3216,3365,3541,3720,3898,4091,4288,4467,4650,4859,4995,5187,5363,5534,5746,5912,6083,6451,6596,6804,6963,7169,7540,7714,8103,8464,8690,8871,9040,9258,9422,9571,9803,10152,10343,10539,10718,10901,11072,11338,11472,11617,11777,11990,12163,12441,12551,12775,12969,13162,13315,13495,13670,13850, 117,113,114,75,141,145,104,112,110,130,111,93,92,136,144,139,171,119,148,110,124,102,118,118,117,88,85,103,93,77,120,106,111,132,87,109,128,118,125,85,131,110,92,101,125,142,140,105,113,144,80,128,140,110,150,94,265,101,144,76,127,111,117,87,146,121,105,110,101,125,79,120, 186,418,552,740,893,1039,1208,1355,1494,1710,2106,2217,2408,2552,2717,2862,3034,3177,3364,3475,3665,3822,4016,4209,4405,4555,4735,4962,5088,5264,5483,5640,5857,6044,6170,6560,6724,6922,7088,7254,7671,7824,8195,8565,8815,9013,9180,9363,9535,9715,9883,10280,10483,10649,10868,10995,11337,11439,11616,11693,11904,12101,12280,12528,12697,12896,13074,13272,13416,13620,13749,13970, 119,20,113,12,1,65,35,29,86,285,18,99,8,21,6,1,24,39,1,66,55,76,75,79,62,95,124,33,99,99,51,106,55,39,281,36,80,41,81,286,43,279,269,125,56,27,78,59,36,88,269,63,56,69,33,77,1,33,1,84,86,62,161,23,78,73,88,43,79,50,101,45, 0,0,0,0,0,0,0,0,0,251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 0,3,4,6,11,57,58,68,132,167,186,199,218,220,223,225,226,227,230,232,234,235,238,240,241,243,244,247,249,250,253,256,259,262,265,268,271,272,276,279,281,283,304,418,426,429,435,436,437,552,553,564,566,569,570,572,577,583,587,590,594,601,606,609,615,618,624,631,639,664,740,751,779,893,1039,1048,1050,1055,1058,1061,1065,1067,1069,1073,1075,1079,1085,1087,1089,1093,1097,1101,1103,1170,1201,1208,1213,1214,1220,1224,1231,1233,1240,1242,1355,1357,1359,1361,1364,1370,1377,1379,1383,1454,1494,1504,1520,1522,1523,1526,1528,1530,1533,1546,1556,1558,1561,1562,1566,1570,1572,1575,1579,1710,1717,1720,1722,1728,1731,1732,1737,1738,1744,1745,1751,1752,1756,1758,1763,1766,1767,1771,1772,1774,1776,1777,1781,1782,1788,1789,1791,1793,1795,1796,1799,1800,1802,1803,1805,1806,1807,1810,1812,1817,1820,1823,1826,1827,1829,1835,1836,1840,1842,1844,1846,1849,1851,1854,1856,1858,1861,1864,1872,1876,1879,1880,1885,1887,1888,1893,1899,1903,1904,1906,1908,1910,1914,1918,1920,1922,1923,1924,1926,1930,1933,1934,1936,1938,1945,1947,1948,1951,1952,1953,1954,1956,1962,1963,1964,1967,1970,1973,1977,1981,1994,2106,2111,2117,2120,2123,2217,2220,2239,2250,2254,2255,2258,2263,2266,2270,2283,2284,2287,2298,2301,2315,2408,2415,2552,2554,2558,2572,2717,2722,2862,2924,3008,3034,3049,3055,3057,3177,3192,3200,3208,3210,3215,3364,3475,3495,3498,3500,3511,3519,3520,3526,3529,3530,3537,3540,3665,3669,3673,3682,3687,3713,3719,3790,3813,3822,3839,3840,3843,3844,3846,3855,3857,3861,3863,3865,3866,3868,3876,3885,3886,3887,3892,3897,4016,4018,4022,4026,4028,4031,4037,4038,4042,4044,4052,4054,4055,4059,4062,4067,4071,4073,4074,4080,4082,4085,4090,4209,4224,4231,4233,4236,4239,4241,4255,4260,4263,4276,4287,4405,4416,4427,4430,4435,4437,4458,4466,4555,4557,4568,4571,4574,4577,4585,4587,4594,4595,4600,4603,4604,4606,4611,4615,4618,4619,4625,4627,4642,4649,4735,4742,4744,4747,4756,4761,4764,4768,4771,4774,4776,4777,4780,4786,4789,4795,4796,4800,4805,4807,4810,4814,4816,4819,4820,4828,4831,4834,4837,4846,4858,4932,4957,4962,4978,4985,4994,5088,5094,5113,5119,5126,5132,5133,5136,5140,5144,5146,5148,5153,5161,5162,5169,5178,5186,5264,5265,5274,5277,5287,5289,5291,5296,5300,5304,5306,5309,5318,5322,5324,5328,5331,5333,5335,5336,5341,5346,5348,5350,5355,5362,5483,5487,5491,5495,5501,5506,5531,5533,5571,5620,5640,5659,5665,5677,5680,5696,5700,5707,5711,5714,5717,5726,5729,5733,5737,5745,5857,5869,5874,5879,5881,5885,5892,5894,5895,5905,5911,6044,6054,6058,6061,6067,6069,6082,6170,6176,6179,6180,6193,6199,6205,6210,6215,6217,6221,6225,6228,6233,6242,6246,6249,6251,6253,6295,6341,6347,6375,6384,6387,6390,6394,6402,6407,6410,6411,6413,6414,6419,6431,6442,6444,6446,6450,6513,6560,6568,6575,6577,6579,6586,6589,6591,6595,6623,6724,6726,6728,6738,6765,6773,6782,6803,6922,6932,6936,6937,6939,6944,6949,6952,6953,6955,6958,6962,7001,7088,7093,7094,7101,7103,7106,7116,7125,7127,7129,7140,7144,7146,7157,7160,7165,7168,7254,7269,7276,7279,7282,7290,7293,7298,7301,7304,7306,7308,7312,7317,7319,7322,7329,7330,7332,7337,7339,7342,7346,7349,7350,7354,7356,7359,7361,7369,7371,7379,7430,7440,7452,7461,7467,7468,7470,7474,7475,7481,7484,7485,7489,7494,7495,7496,7498,7500,7502,7505,7508,7511,7514,7523,7524,7526,7528,7534,7539,7671,7674,7678,7684,7686,7688,7694,7702,7713,7824,7829,7835,7845,7848,7852,7855,7857,7859,7861,7866,7868,7873,7874,7876,7879,7883,7884,7887,7889,7890,7897,7899,7907,7909,7918,7920,7925,7929,7932,7943,7951,8002,8007,8018,8020,8023,8027,8033,8036,8041,8043,8048,8049,8051,8054,8063,8081,8083,8086,8094,8102,8195,8201,8209,8211,8213,8217,8238,8240,8242,8249,8251,8254,8269,8271,8276,8279,8286,8289,8346,8356,8361,8364,8371,8373,8375,8379,8381,8382,8388,8389,8391,8401,8403,8406,8409,8411,8415,8418,8419,8424,8426,8428,8431,8433,8435,8439,8443,8446,8447,8449,8450,8453,8454,8457,8459,8461,8463,8471,8496,8565,8569,8573,8576,8578,8581,8583,8586,8591,8593,8599,8600,8602,8606,8611,8614,8615,8618,8620,8622,8626,8628,8630,8632,8633,8642,8651,8655,8658,8660,8671,8679,8683,8686,8689,8815,8828,8835,8836,8838,8840,8845,8846,8849,8851,8857,8863,8870,9013,9021,9027,9031,9033,9039,9180,9188,9194,9205,9207,9210,9213,9215,9218,9220,9221,9224,9229,9230,9233,9245,9255,9257,9363,9374,9382,9384,9389,9391,9394,9396,9401,9403,9417,9421,9535,9554,9556,9559,9561,9570,9715,9724,9728,9730,9735,9740,9744,9747,9764,9769,9771,9774,9777,9782,9783,9793,9795,9802,9883,9885,9896,9900,9903,9906,9907,9911,9915,9918,9926,9928,9931,9935,9937,9939,9942,9943,9954,9956,9959,9961,9964,9968,9974,9982,9984,9986,9992,10049,10069,10078,10083,10084,10089,10096,10098,10104,10105,10112,10113,10116,10121,10122,10125,10129,10142,10146,10150,10151,10280,10314,10317,10320,10323,10327,10330,10331,10342,10441,10483,10485,10486,10493,10498,10506,10513,10523,10538,10649,10656,10663,10669,10672,10674,10677,10679,10681,10683,10686,10688,10694,10698,10699,10704,10706,10715,10717,10789,10868,10884,10887,10895,10900,10995,11020,11027,11033,11051,11057,11064,11067,11068,11071,11337,11400,11402,11439,11471,11616,11693,11716,11722,11733,11737,11740,11748,11759,11765,11774,11776,11904,11906,11914,11916,11922,11937,11939,11941,11943,11944,11948,11950,11962,11964,11965,11978,11980,11989,12015,12057,12101,12105,12117,12121,12124,12125,12137,12151,12154,12157,12159,12162,12280,12284,12296,12298,12301,12304,12309,12312,12315,12316,12329,12335,12337,12339,12341,12342,12344,12346,12348,12350,12355,12359,12361,12365,12368,12370,12374,12386,12393,12401,12418,12420,12439,12440,12528,12530,12540,12543,12545,12548,12550,12697,12702,12703,12707,12711,12714,12717,12719,12720,12726,12733,12735,12736,12738,12743,12745,12747,12752,12756,12774,12859,12896,12908,12915,12916,12923,12926,12928,12932,12940,12942,12944,12946,12949,12960,12968,13023,13074,13077,13091,13094,13096,13098,13099,13103,13107,13113,13116,13119,13121,13123,13127,13134,13146,13149,13161,13272,13278,13290,13292,13296,13298,13304,13307,13314,13416,13418,13441,13443,13444,13450,13451,13454,13460,13470,13476,13479,13482,13485,13494,13620,13622,13626,13631,13641,13649,13653,13654,13657,13659,13666,13669,13749,13774,13802,13811,13817,13821,13831,13833,13837,13842,13846,13849,13970,13980,13982,13986,13987,13999,14014,14179,14181,14185,14187, +chr19 47516511 47535109 m84039_230404_003541_s3/246354145/ccs 396,525,752,1160,1337,1556,1845,2105,2288,2664,2877,3017,3228,3599,3771,3974,4145,4227,4320,4533,4740,4923,5089,5290,5507,5702,6091,6301,6389,6572,7119,7292,7483,7663,7862,8024,8186,8384,8566,8758,8927,9205,9378,9897,10241,10407,10718,11178,11348,11664,11886,12046,12133,12240,12618,12802,12971,13167,13372,13541,13738,13882,15008,15131,15221,15396,15726,15889,16099,16468,16833,17383,17596,17781,17885,17989,18396, 128,179,366,153,112,75,157,161,334,152,139,156,321,150,192,147,81,75,169,149,121,135,160,168,145,272,208,84,149,458,127,166,175,163,161,159,197,163,115,137,277,132,518,343,165,246,453,169,315,182,145,86,77,332,139,160,159,147,160,116,143,1107,122,89,120,266,120,118,348,339,549,212,179,103,100,406,136, 351,524,704,1118,1313,1449,1631,2002,2266,2622,2816,3016,3173,3549,3749,3963,4121,4226,4302,4489,4682,4861,5058,5249,5458,5652,5974,6299,6385,6538,7030,7246,7458,7658,7826,8023,8183,8383,8547,8681,8895,9204,9337,9896,10240,10406,10653,11171,11347,11663,11846,12031,12132,12210,12572,12757,12962,13130,13314,13532,13657,13881,14989,15130,15220,15341,15662,15846,16007,16447,16807,17382,17595,17775,17884,17985,18395, 45,1,48,42,24,107,214,103,22,42,61,1,55,50,22,11,24,1,18,44,58,62,31,41,49,50,117,2,4,34,89,46,25,5,36,1,3,1,19,77,32,1,41,1,1,1,65,7,1,1,40,15,1,30,46,45,9,37,58,9,81,1,19,1,1,55,64,43,92,21,26,1,1,6,1,4,1, 0,0,0,0,0,0,250,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 0,1,2,4,5,351,359,395,524,704,713,716,718,723,725,737,739,751,1118,1141,1145,1151,1159,1313,1321,1336,1449,1473,1496,1501,1506,1531,1534,1543,1545,1548,1552,1555,1631,1633,1639,1641,1644,1672,1673,1676,1678,1682,1689,1735,1738,1739,1743,1754,1761,1763,1765,1767,1768,1771,1774,1778,1784,1785,1789,1792,1795,1798,1799,1844,2002,2004,2009,2010,2014,2025,2026,2030,2031,2034,2049,2054,2056,2058,2061,2064,2067,2069,2072,2077,2081,2083,2086,2089,2104,2266,2270,2273,2279,2282,2287,2622,2624,2638,2639,2653,2655,2663,2784,2816,2817,2831,2832,2835,2838,2840,2843,2846,2852,2859,2864,2867,2876,3016,3173,3181,3219,3223,3227,3549,3554,3564,3577,3580,3596,3598,3749,3755,3761,3765,3770,3963,3968,3970,3973,4121,4143,4144,4226,4302,4308,4319,4489,4491,4496,4500,4509,4514,4520,4532,4682,4690,4701,4705,4710,4714,4717,4719,4739,4861,4867,4872,4879,4881,4884,4886,4887,4892,4922,4984,5058,5060,5063,5067,5069,5088,5249,5266,5271,5275,5289,5458,5476,5499,5506,5652,5655,5668,5671,5675,5686,5689,5692,5701,5974,6035,6043,6049,6053,6056,6059,6062,6083,6090,6299,6300,6385,6388,6538,6571,7030,7075,7077,7118,7246,7264,7272,7275,7282,7286,7291,7397,7458,7461,7463,7479,7482,7658,7662,7826,7829,7831,7857,7861,8023,8183,8185,8383,8547,8555,8565,8681,8689,8706,8732,8737,8739,8746,8757,8895,8910,8911,8926,9204,9337,9363,9368,9370,9373,9375,9377,9896,10240,10406,10653,10656,10664,10668,10717,11171,11177,11347,11663,11846,11850,11853,11855,11860,11867,11873,11875,11883,11885,12031,12036,12039,12042,12045,12132,12210,12212,12232,12237,12239,12572,12574,12578,12579,12591,12593,12596,12600,12617,12662,12757,12772,12774,12775,12786,12801,12962,12965,12970,13130,13155,13157,13166,13314,13329,13331,13338,13346,13348,13371,13495,13532,13534,13540,13657,13677,13687,13697,13701,13706,13711,13715,13718,13737,13881,14989,15000,15006,15007,15130,15220,15341,15342,15344,15346,15350,15354,15366,15369,15395,15662,15680,15697,15699,15701,15704,15725,15846,15868,15870,15873,15875,15877,15885,15886,15888,16007,16028,16029,16042,16064,16068,16075,16078,16083,16098,16447,16467,16807,16814,16820,16822,16824,16828,16832,17382,17595,17775,17780,17884,17985,17988,18395,18532,18540,18544,18546,18548,18560,18567,18574,18582,18585, +chr19 47516658 47520871 m84039_230401_034725_s4/172757415/ccs 186,335,523,722,929,1065,1256,1431,1698,1949,2208,2492,2729,2901,3104,3285,3461,3668,3850,4017, 117,121,119,96,134,137,128,95,216,152,283,200,141,132,127,147,186,127,145,107, 149,303,456,642,818,1063,1202,1384,1526,1914,2101,2491,2692,2870,3033,3231,3432,3647,3795,3995, 37,32,67,80,111,2,54,47,172,35,107,1,37,31,71,54,29,21,55,22, 0,0,0,0,0,0,0,0,247,0,0,0,0,0,0,0,0,0,0,0, 0,1,3,4,6,51,149,159,161,162,164,168,173,175,178,182,184,185,303,312,321,326,334,456,464,466,471,473,476,480,486,489,491,495,497,499,501,503,505,520,522,642,649,663,667,670,674,679,688,698,707,710,711,713,716,718,721,818,824,835,839,843,851,855,858,861,867,870,873,875,880,882,883,886,890,892,894,897,898,900,904,908,910,912,914,916,918,920,922,925,926,928,1063,1064,1202,1204,1208,1220,1223,1227,1239,1247,1249,1255,1302,1384,1387,1392,1398,1401,1405,1408,1416,1421,1430,1526,1529,1531,1535,1542,1545,1549,1553,1555,1557,1567,1569,1570,1576,1577,1581,1583,1588,1591,1592,1596,1599,1601,1606,1607,1614,1616,1618,1621,1624,1630,1631,1635,1642,1645,1648,1651,1652,1654,1657,1660,1697,1914,1930,1934,1942,1945,1948,2101,2112,2117,2123,2132,2137,2140,2160,2169,2171,2173,2174,2179,2181,2186,2187,2189,2195,2199,2202,2204,2207,2491,2692,2695,2698,2700,2704,2708,2711,2716,2719,2728,2870,2880,2883,2888,2890,2891,2896,2900,3033,3045,3071,3072,3075,3080,3083,3089,3103,3231,3247,3255,3258,3262,3264,3268,3270,3275,3281,3283,3284,3360,3432,3447,3448,3450,3453,3460,3647,3649,3667,3795,3812,3816,3820,3826,3830,3831,3843,3845,3849,3907,3995,4013,4016,4078,4112,4124,4142,4146,4154,4164,4166,4171,4172,4184,4188,4192,4198,4200,4206,4207,4208,4209,4211, +chr19 47516680 47530390 m84008_230107_003043_s1/83759496/ccs 204,357,501,716,854,1098,1239,1732,2068,2172,2331,2482,2674,2857,3054,3233,3421,3590,3760,3944,4158,4379,4525,4740,4947,5108,5280,5465,5667,5838,6016,6214,6385,6553,6750,6940,7184,7389,7550,7746,7929,8135,8323,8502,8706,8890,9004,9090,9458,9619,9764,9961,10135,10441,10632,10833,10991,11212,11387,11729,11905,12155,12377,12556,12731,12940,13137,13284,13459, 148,141,146,126,145,140,133,275,81,130,112,144,137,130,102,165,158,161,183,179,151,145,160,129,116,160,155,163,152,160,144,136,152,130,168,168,108,135,176,158,150,130,146,203,179,113,85,333,101,139,157,144,305,171,144,147,157,109,93,172,167,92,117,134,148,154,128,162,150, 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45,71,73,76,78,79,86,92,94,100,104,107,109,112,115,252,274,278,282,294,424,445,452,461,473,475,484,487,489,658,669,673,677,680,682,686,692,860,1008,1027,1032,1034,1160,1186,1199,1353,1380,1400,1404,1545,1554,1558,1564,1566,1568,1571,1572,1574,1587,1589,1592,1595,1597,1598,1600,1602,1608,1613,1617,1618,1619,1624,1629,1639,1641,1644,1763,1786,1794,1800,1803,1805,1806,1812,1814,1817,1963,1968,1971,1995,1999,2003,2010,2025,2169,2189,2190,2194,2198,2201,2203,2209,2335,2343,2347,2364,2366,2370,2521,2527,2528,2532,2539,2548,2552,2557,2560,2563,2566,2569,2729,2731,2733,2735,2737,2740,2741,2749,2754,2758,2760,2762,2773,2778,2929,2932,2934,2939,2942,2953,2964,2972,3121,3136,3143,3156,3208,3289,3295,3318,3338,3339,3342,3508,3520,3524,3527,3531,3532,3537,3539,3545,3546,3548,3709,3721,3725,4518,4522,4524,4528,4539,4546,4686,4688,4691,4695,4713,4732,4734,4748,4750,4752,4898,4916,4925,4930,4938,5083,5253,5256,5261,5272,5274,5282,5286,5294,5296,5297,5309,5313,5314,5321,5323,5325,5329,5331,5332,5471,5477,5484,5492,5498,5501,5503,5512,5518,5549,5676,5684,5823,5827,5835,5839,5842,5845,5847,5850,5854,5856,5860,5863,5865,5867,5875,5879,5885,5992,5997,6001,6003,6005,6011,6013,6017,6021,6023,6033,6036,6039,6044,6049,6055,6059,6203,6205,6208,6225,6227,6230,6245,6248,6389,6392,6394,6397,6400,6413,6423,6559,6569,6571,6579,6580,6597,6601,6759,6766,6769,6786,6792,6807,6809,6935,6937,6943,6946,6948,6951,6953,6954,6955,6957,6959,6962,6963,6966,6969,6974,6978,6988,6990,7127,7129,7132,7136,7142,7144,7146,7150,7152,7154,7158,7160,7322,7347,7366,7377,7383,7505,7511,7532,7536,7558,7688,7702,7712,7716,7718,7720,7724,7726,7758,7759,7898,7902,7906,7921,7927,7928,7932,7937,7938,7942,7948,7951,7955,7963,7965,8101,8109,8110,8114,8118,8124,8130,8147,8149,8160,8177,8319,8323,8325,8330,8334,8336,8338,8343,8361,8680,8684,8688,8691,8693,8696,8698,8705,8713,8716,8720,8724,8725,8730,8733,8735,8738,8741,8744,8746,8749,8756,8762,8767,8773,8909,8913,8923,8925,8929,8931,8937,8942,8944,9101,9107,9112,9119,9130,9132,9134,9311,9314,9322,9328,9463,9467,9470,9474,9621,9640,9644,9646,9648,9652,9659,9847,9854,9855,9986,9993,10005,10010,10017,10021,10025,10026,10028,10031,10034,10036,10039,10042,10045,10047,10056,10058,10065,10067,10069,10071,10082,10085,10089,10091,10095,10098,10104,10169,10242,10255,10257,10258,10260,10270,10273,10278,10280,10286,10430,10432,10441,10444,10447,10449,10456,10458,10460,10461,10463,10465,10466,10468,10473,10475,10481,10482,10486,10517,10606,10610,10626,10632,10638,10642,10645,10646,10653,10656,10660,10662,10804,10821,10824,10828,10829,10833,10843,10846,10849,10851,10853,10857,10864,10982,10983,10989,10991,10997,11000,11002,11004,11008,11010,11014,11020,11026,11034,11038,11051,11058,11060,11062,11064,11071,11167,11209,11212,11215,11219,11224,11225,11246,11248,11250,11253,11255,11258,11268,11387,11396,11400,11405,11407,11408,11414,11434,11436,11438,11440,11442,11444,11448,11450,11452,11458,11462,11465,11467,11472,11612,11615,11617,11622,11631,11643,11768,11770,11775,11779,11790,11793,11800,11810,11818,11823,11831,11973,11986,12005,12008,12161,12164,12168,12178,12192,12327,12341,12343,12345,12347,12353,12355,12358,12359,12362,12373,12376,12389,12393,12409,12415,12567,12588,12729,12740,12751,12757,12759,12765,12768,12769,12788,12798,12938,12945,12948,12953,12959,12962,12965,12966,12970,12973,12977,12979,12982,13007,13128,13131,13140,13145,13148,13152,13154,13157,13159,13160,13167,13170,13174,13177,13178,13182,13198,13202,13206,13315,13333,13363,13365,13369,13376,13383,13389,13522, +chr19 47518837 47521124 m84039_230404_003541_s3/117772968/ccs 152,462,703,898,1085,1407,1628,1783,1955, 278,132,194,127,299,169,154,151,152, 151,430,594,897,1025,1384,1576,1782,1934,2107, 1,32,109,1,60,23,52,1,21,1, 0,0,0,0,0,0,0,0,0,0, 1,2,3,5,24,26,151,430,438,441,449,450,461,594,609,613,616,618,621,623,631,633,646,702,897,1025,1029,1051,1069,1077,1084,1384,1393,1398,1400,1406,1576,1579,1580,1584,1587,1590,1593,1597,1599,1611,1625,1627,1782,1934,1942,1952,1954,2107,2261,2265,2282,2284, +chr19 47518978 47534929 m84039_230401_034725_s4/237175162/ccs 88,217,328,512,715,832,965,1047,1161,1249,1370,1531,1794,1872,2043,2244,2408,2542,2678,2813,3042,3142,3483,4023,4133,4510,4807,4932,5240,5489,5788,5927,6129,6259,6382,6542,6644,6934,7025,7142,7297,7502,7634,7899,7993,8126,8407,8502,8659,8844,8961,9148,9250,9429,9670,9992,10295,10439,10663,10746,11047,11160,11340,11497,11802,11930,12070,12323,12566,12767,12931,13416,13628,13785,13878,13983,14064,14175,14332,14420,14558,14676,14807,15017,15147,15458, 108,110,183,202,116,132,76,109,87,120,156,143,77,170,200,158,133,135,134,228,99,293,522,109,303,296,80,307,171,298,138,157,129,122,157,101,217,86,116,154,204,131,167,93,82,280,94,156,168,101,186,101,162,235,275,162,143,209,82,300,112,114,156,262,127,139,252,175,183,163,484,141,101,92,104,80,110,154,87,135,117,130,170,129,308,383, 87,196,327,511,714,831,964,1041,1156,1248,1369,1526,1674,1871,2042,2243,2402,2541,2677,2812,3041,3141,3435,4005,4132,4436,4806,4887,5239,5411,5787,5926,6084,6258,6381,6539,6643,6861,7020,7141,7296,7501,7633,7801,7992,8075,8406,8501,8658,8827,8945,9147,9249,9412,9664,9945,10154,10438,10648,10745,11046,11159,11274,11496,11759,11929,12069,12322,12498,12749,12930,13415,13557,13729,13877,13982,14063,14174,14329,14419,14555,14675,14806,14977,15146,15455,15841, 1,21,1,1,1,1,1,6,5,1,1,5,120,1,1,1,6,1,1,1,1,1,48,18,1,74,1,45,1,78,1,1,45,1,1,3,1,73,5,1,1,1,1,98,1,51,1,1,1,17,16,1,1,17,6,47,141,1,15,1,1,1,66,1,43,1,1,1,68,18,1,1,71,56,1,1,1,1,3,1,3,1,1,40,1,3,1, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 4,5,87,116,196,216,327,511,714,831,964,1041,1046,1156,1160,1248,1369,1526,1530,1674,1697,1759,1767,1768,1793,1871,2042,2243,2402,2405,2407,2541,2677,2812,3041,3141,3435,3443,3482,4005,4019,4022,4071,4132,4436,4440,4466,4495,4509,4806,4887,4888,4931,5239,5411,5428,5488,5787,5926,6036,6084,6128,6258,6323,6335,6381,6439,6539,6541,6643,6861,6929,6933,7020,7024,7102,7141,7296,7501,7575,7633,7801,7836,7837,7875,7876,7878,7898,7992,8075,8079,8115,8125,8406,8501,8658,8827,8843,8945,8960,9147,9249,9412,9416,9428,9664,9669,9945,9991,10046,10154,10163,10234,10241,10262,10266,10294,10364,10365,10438,10648,10662,10745,11046,11159,11238,11274,11277,11280,11337,11339,11430,11496,11759,11762,11769,11801,11897,11929,11989,12069,12322,12498,12565,12626,12749,12762,12766,12930,13415,13557,13621,13627,13683,13729,13731,13742,13744,13746,13759,13770,13784,13877,13982,14063,14174,14329,14331,14419,14469,14555,14557,14614,14675,14806,14977,15016,15146,15455,15457,15841,15888,15941,15942,15943,15944,15946,15947, +chr19 47519260 47541371 m84008_230107_003043_s1/164959873/ccs 99,306,479,686,881,1073,1248,1431,1636,1845,2021,2188,2366,2568,2739,2955,3107,3363,3541,3720,4182,4339,4578,4771,4960,5096,5265,5465,5621,5805,6009,6174,6352,6569,6734,6956,7206,7375,7603,7791,8003,8261,8432,8656,8783,8981,9205,9374,9529,9759,10123,10266,10473,10691,10866,10970,11187,11340,11535,11909,12120,12272,12457,12679,12880,13061,13274,13418,13688,13886,14071,14222,14392,14544,14762,14953,15110,15336,15554,15751,15915,16102,16253,16508,16676,16855,17071,17266,17462,17628,17827,18000,18213,18410,18574,18734,19385,19631,19830,19990,20193,20374,20551,20759,21083,21250,21479,21702, 88,112,129,138,143,132,105,111,117,119,108,117,128,120,127,139,143,139,128,391,115,121,121,121,118,143,142,131,105,112,124,136,132,130,168,146,113,152,132,95,94,134,104,97,154,111,108,134,161,283,118,144,128,144,85,142,123,136,306,118,134,148,160,147,116,148,143,165,83,140,133,97,151,164,119,132,148,148,178,128,155,124,199,153,163,170,123,108,106,144,152,130,104,100,144,645,194,142,126,137,121,157,124,94,154,152,114,97, 187,418,608,824,1024,1205,1353,1542,1753,1964,2129,2305,2494,2688,2866,3094,3250,3502,3669,4111,4297,4460,4699,4892,5078,5239,5407,5596,5726,5917,6133,6310,6484,6699,6902,7102,7319,7527,7735,7886,8097,8395,8536,8753,8937,9092,9313,9508,9690,10042,10241,10410,10601,10835,10951,11112,11310,11476,11841,12027,12254,12420,12617,12826,12996,13209,13417,13583,13771,14026,14204,14319,14543,14708,14881,15085,15258,15484,15732,15879,16070,16226,16452,16661,16839,17025,17194,17374,17568,17772,17979,18130,18317,18510,18718,19379,19579,19773,19956,20127,20314,20531,20675,20853,21237,21402,21593,21799, 119,61,78,57,49,43,78,94,92,57,59,61,74,51,89,13,113,39,51,71,42,118,72,68,18,26,58,25,79,92,41,42,85,35,54,104,56,76,56,117,164,37,120,30,44,113,61,21,69,81,25,63,90,31,19,75,30,59,68,93,18,37,62,54,65,65,1,105,115,45,18,73,1,54,72,25,78,70,19,36,32,27,56,15,16,46,72,88,60,55,21,83,93,64,16,6,52,57,34,66,60,20,84,230,13,77,109,95, 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+chr19 47519556 47545267 m84008_230107_003043_s1/169083681/ccs 1044,1229,1468,1749,2121,2327,2513,3666,4252,4525,4665,4825,5196,5647,6182,6621,7132,7352,7579,7782,7941,8134,8844,9011,9137,9343,9591,9809,9967,10173,10420,10624,10807,10999,11166,11561,12163,12334,12564,12765,12973,13315,13561,13758,13898,14523,15095,16311,16509,16729,16918,17117,17473,17832,18032,18387,18603,18780,19004,19306,19817,20252,20675,21698,22181,22557,22913,23123,23286,23505,23670,24092,24256,24687,24854,25254, 184,201,268,352,135,135,1140,585,272,139,141,272,371,534,438,483,194,213,164,158,167,700,166,125,166,247,161,157,205,212,203,177,191,161,394,547,137,199,183,182,341,205,135,139,624,571,1213,197,214,188,166,355,358,171,323,182,176,223,284,510,434,148,1022,305,375,256,189,162,218,164,367,148,376,163,306,140, 1012,1228,1430,1736,2101,2256,2462,3653,4251,4524,4664,4806,5097,5567,6181,6620,7104,7326,7565,7743,7940,8108,8834,9010,9136,9303,9590,9752,9966,10172,10385,10623,10801,10998,11160,11560,12108,12300,12533,12747,12947,13314,13520,13696,13897,14522,15094,16308,16508,16723,16917,17084,17472,17831,18003,18355,18569,18779,19003,19288,19816,20251,20400,21697,22003,22556,22813,23102,23285,23504,23669,24037,24240,24632,24850,25160,25394, 32,1,38,13,20,71,51,13,1,1,1,19,99,80,1,1,28,26,14,39,1,26,10,1,1,40,1,57,1,1,35,1,6,1,6,1,55,34,31,18,26,1,41,62,1,1,1,3,1,6,1,33,1,1,29,32,34,1,1,18,1,1,275,1,178,1,100,21,1,1,1,55,16,55,4,94,96, 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,251,0,248,0,0,0,0,0,0,0,0,0,0,0,243, 1012,1029,1038,1043,1228,1430,1437,1467,1736,1742,1745,1748,2101,2107,2110,2120,2256,2260,2265,2268,2292,2293,2298,2299,2321,2326,2462,2469,2482,2506,2512,3653,3657,3662,3665,4251,4524,4664,4806,4824,5097,5147,5195,5567,5579,5606,5644,5646,6181,6620,7104,7131,7326,7351,7565,7578,7743,7776,7781,7904,7940,8108,8133,8834,8837,8843,9010,9136,9234,9303,9342,9590,9752,9757,9758,9789,9808,9966,10172,10385,10419,10623,10801,10804,10806,10998,11160,11165,11560,12108,12118,12121,12129,12135,12138,12142,12162,12300,12303,12307,12309,12312,12315,12333,12533,12536,12540,12549,12552,12553,12555,12561,12563,12747,12757,12764,12947,12972,13314,13520,13522,13523,13537,13541,13547,13550,13553,13560,13696,13704,13709,13711,13729,13733,13739,13743,13747,13751,13755,13757,13897,14522,15094,16308,16310,16508,16723,16728,16917,17084,17094,17111,17116,17472,17831,18003,18005,18031,18355,18386,18569,18575,18579,18587,18589,18595,18602,18779,19003,19288,19291,19305,19816,20251,20400,20421,20423,20427,20431,20435,20437,20439,20442,20457,20462,20467,20470,20472,20488,20532,20536,20579,20581,20614,20641,20643,20652,20668,20671,20674,21697,22003,22004,22033,22038,22041,22072,22095,22100,22102,22129,22132,22151,22153,22157,22169,22174,22176,22180,22556,22813,22883,22886,22889,22891,22893,22909,22912,23102,23122,23285,23504,23669,24037,24039,24047,24054,24061,24069,24071,24087,24091,24240,24243,24247,24254,24255,24632,24686,24850,24853,25160,25162,25171,25179,25184,25208,25211,25213,25217,25225,25239,25244,25249,25250,25253,25394,25399,25402,25404,25405,25450,25463,25468,25474,25477,25478,25481,25484,25490, +chr19 47519636 47531246 m54329U_210323_190418/64947030/ccs 167,390,576,749,896,1126,1510,1672,2138,2267,2475,2756,2922,3115,3271,3431,3702,3883,4100,4240,4436,4646,4817,4986,5145,5334,5534,5853,6025,6213,6396,6621,6725,6946,7157,7326,7559,7812,7975,8303,8489,8694,8841,9021,9236,9427,9765,9992,10238,10370,10542,10751,10957,11148,11321,11469, 115,133,93,80,123,144,114,242,108,117,260,130,135,120,147,252,157,133,139,139,155,117,137,125,93,111,295,167,129,137,133,103,128,107,111,116,126,149,287,97,158,122,142,138,127,254,109,124,94,122,156,156,117,98,126,95, 129,282,523,669,829,1019,1270,1624,1914,2246,2384,2735,2886,3057,3235,3418,3683,3859,4016,4239,4379,4591,4763,4954,5111,5238,5445,5829,6020,6154,6350,6529,6724,6853,7053,7268,7442,7685,7961,8262,8400,8647,8816,8983,9159,9363,9681,9874,10116,10332,10492,10698,10907,11074,11246,11447, 38,108,53,80,67,107,240,48,224,21,91,21,36,58,36,13,19,24,84,1,57,55,54,32,34,96,89,24,5,59,46,92,1,93,104,58,117,127,14,41,89,47,25,38,77,64,84,118,122,38,50,53,50,74,75,22, 0,0,0,0,0,0,0,0,253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0, 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diff --git a/tests/regression/snapshots/regression__extract__extract_m6a.snap b/tests/regression/snapshots/regression__extract__extract_m6a.snap new file mode 100644 index 00000000..5a49a13d --- /dev/null +++ b/tests/regression/snapshots/regression__extract__extract_m6a.snap @@ -0,0 +1,27 @@ +--- +source: tests/regression/extract.rs +expression: "select_bed12_cols(&out, BED12_COLS)" +--- +chrom start end name strand block_count block_sizes block_starts +ptg000001l 306 15696 m54329U_210323_190418/5048829/ccs - 1528 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diff --git a/tests/regression/snapshots/regression__extract__extract_msp.snap b/tests/regression/snapshots/regression__extract__extract_msp.snap new file mode 100644 index 00000000..1521861c --- /dev/null +++ b/tests/regression/snapshots/regression__extract__extract_msp.snap @@ -0,0 +1,27 @@ +--- +source: tests/regression/extract.rs +expression: "select_bed12_cols(&out, BED12_COLS)" +--- +chrom start end name strand block_count block_sizes block_starts +ptg000001l 306 15696 m54329U_210323_190418/5048829/ccs - 79 0,24,80,112,143,57,43,164,84,94,75,84,90,105,41,136,62,115,76,280,72,26,77,275,77,58,42,37,51,45,89,113,38,110,21,53,17,36,89,131,297,63,21,46,66,29,46,85,85,52,51,70,29,75,32,24,41,11,79,1,56,91,98,41,88,87,42,1,50,135,79,85,106,64,103,112,25,85,1 0,160,311,509,737,1001,1193,1347,1595,1777,1985,2162,2352,2569,2757,2896,3147,3322,3558,3748,4115,4324,4471,4648,5080,5294,5451,5643,5825,5990,6164,6360,6600,6763,6990,7139,7337,7485,7629,7815,8088,8484,8665,8866,9040,9222,9374,9552,9755,9964,10141,10327,10518,10703,10894,11073,11221,11414,11570,11769,11920,12091,12287,12496,12654,12865,13064,13259,13396,13568,13828,14025,14228,14415,14601,14806,15057,15201,15389 +ptg000001l 832 21833 m54329U_210323_190418/141691444/ccs + 86 0,1,1,21,1,15,21,3,7,15,1,48,1,19,6,36,54,1,14,4,37,15,27,21,11,30,39,7,1,18,7,31,33,33,1,56,1,21,11,36,1,5,15,8,11,1,1,1,24,40,24,24,1,46,11,16,44,27,4,57,55,13,99,24,7,36,53,1,38,1,35,34,14,1,10,28,1,1,58,4,11,8,1,1,11,1 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0,59,82,91,59,15,49,16,56,77,89,51,91,66,91,70,77,49,53,82,63,72,26,71,1,28,27,31,62,78,38,45,52,67,55,89,13,35,20,59,58,63,57,69,66,89,152,69,27,62,86,63,63,56,72,64,102,84,77,97,37,71,29,59,83,74,107,77,112,83,11,72,37,72,89,1,11,41,18,100,78,76,25,31,59,60,27,20,101,52,86,1 0,92,265,461,688,875,1082,1272,1460,1643,1849,2070,2247,2451,2629,2859,3038,3281,3473,3651,3865,4043,4274,4447,4835,5044,5225,5399,5587,5806,6001,6186,6387,6573,6909,7115,7300,7481,7676,7844,8055,8240,8445,8622,8848,9033,9232,9490,9725,9924,10071,10283,10458,10666,10867,11090,11283,11498,11730,11906,12124,12322,12543,12731,12900,13101,13288,13525,13740,13961,14191,14354,14570,14733,14920,15138,15354,15532,16089,16257,16479,16673,16887,17089,17254,17451,17674,17844,18018,18233,18418,18695 +ptg000001l 21207 39362 m54329U_210323_190418/114362450/ccs + 99 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0,12,60,73,59,37,106,45,122,94,86,25,24,217,25,92,95,56,50,134,105,301,115,59,75,64,59,52,58,87,108,75,67,87,97,72,120,85,53,53,62,67,53,93,22,49,13,44,87,24,30,145,65,74,53,39,44,63,67,71,38,32,37,72,63,95,54,106,37,315,102,37,45,70,26,1,46,56,97,62,91,41,22,102,85,66,145,96,55,42,39,40,76,101,65,70,76,54,69,63,66,27,95,1 0,70,230,422,615,800,973,1232,1388,1644,1847,2069,2269,2397,2700,2842,3059,3273,3453,3603,3820,4053,4476,4708,4875,5079,5278,5483,5664,5873,6078,6286,6491,6697,6906,7106,7269,7464,7684,7862,8057,8273,8456,8634,8826,9008,9336,9522,9674,9900,10061,10225,10617,10792,11002,11182,11370,11561,11740,11931,12142,12318,12520,12702,12897,13107,13309,13473,13696,13879,14281,14529,14706,14897,15108,15303,15458,15638,15822,16054,16240,16452,16656,16776,17007,17199,17525,17764,17962,18159,18346,18529,18718,18904,19118,19321,19511,19722,19916,20138,20327,20541,20704,21037 +ptg000001l 25050 34283 m54329U_210323_190418/43059336/ccs + 49 0,61,81,26,66,1,63,1,11,1,1,2,12,73,63,68,33,40,45,25,45,34,6,32,19,42,56,40,14,42,60,62,59,8,1,39,29,25,1,1,8,8,26,13,53,22,82,38,1 0,142,323,552,717,955,1101,1322,1476,1673,1889,2050,2210,2359,2551,2732,2942,3134,3327,3534,3724,3901,4097,4301,4461,4649,4848,5062,5249,5433,5607,5807,6018,6375,6551,6694,6893,7085,7244,7470,7739,7908,8073,8259,8401,8609,8793,9052,9232 +ptg000001l 25868 39722 m54329U_210323_190418/10290844/ccs - 71 0,1,44,1,33,25,41,85,44,19,67,81,84,36,41,29,105,16,71,12,33,47,115,48,75,15,51,65,18,29,9,39,9,46,45,29,92,62,77,94,81,49,1,49,54,56,1,76,60,36,21,61,155,8,90,51,35,50,56,80,29,41,64,80,89,33,56,55,23,1,1 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0,134,331,556,713,927,1099,1244,1460,1903,2076,2273,2466,2645,2840,3080,3255,3459,3623,3782,3988,4154,4418,4615,4786,4961,5153,5356,5557,5708,5948,6271,6589,6821,6977,7199,7367,7619,7783,7992,8187,8332,8599,8840,9210,9448,9610,9777,10178,10371,10761,10944,11176,11360,11535,11725,11873,12158,12327,12520,12673,12862,13102,13260,13440,13640,13854,14019,14200,14392,14600,14753,15004,15187,15445,15640,15812 +ptg000001l 31406 49213 m54329U_210323_190418/94437983/ccs - 88 0,23,5,9,11,43,37,16,32,21,39,29,20,55,9,9,77,17,29,11,9,36,42,44,19,71,58,89,22,94,40,1,50,86,67,48,39,1,27,10,57,14,47,34,70,36,12,26,30,88,53,33,19,10,17,25,30,63,15,23,22,51,47,17,32,52,29,24,29,64,82,38,20,37,67,10,67,66,72,56,9,13,12,67,53,7,83,1 0,92,279,448,624,818,958,1171,1317,1668,1810,2006,2189,2585,2798,2998,3163,3419,3592,3772,3974,4187,4363,4564,4769,4939,5153,5326,5547,5674,5925,6130,6685,6859,7072,7289,7487,7675,7873,8062,8252,8461,8658,8861,9055,9266,9471,9650,9836,10009,10227,10453,10631,10835,11020,11196,11370,11556,11784,11964,12155,12339,12540,12749,12941,13103,13323,13532,13707,13876,14066,14302,14553,14742,14930,15171,15341,15561,15755,15986,16208,16384,16576,17024,17224,17431,17595,17806 +ptg000001l 42836 56647 m54329U_210323_190418/162202206/ccs - 67 0,1,1,1,20,45,71,35,50,60,40,25,33,6,2,1,18,36,38,69,24,77,91,21,50,26,27,11,77,42,48,64,46,8,12,56,46,24,9,45,8,56,83,50,55,1,1,56,1,26,26,33,14,85,9,66,44,18,49,29,35,45,78,87,93,38,1 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0,174,361,530,676,863,1074,1237,1458,1609,1807,2002,2169,2381,2543,2757,2932,3108,3304,3486,3690,3855,4059,4232,4418,4589,4760,4972,5167,5437,5643,5811,5990,6163,6386,6570,6749,6918,7122,7333,7503,7712,7919,8122,8284,8518,8692,8905,9093,9280,9499,9696,9891,10088,10279,10477,10728,10909,11133,11291,11531,11716,11921,12123,12348,12571,12723,12885,13147,13334,13537,13731,13953,14118,14339,14509,14710,14862,15076,15302,15484,15715,15876,16039,16226,16448,16638,16835,17020,17224,17417,17623,17814,17983,18243,18322,18514,18711,18874,19056,19245,19409,19578 +ptg000001l 56406 72943 m54329U_210323_190418/54199156/ccs - 85 0,93,84,75,36,112,35,48,10,45,54,65,15,90,20,103,64,10,93,66,50,59,33,83,96,41,103,90,88,111,55,40,113,71,132,31,103,84,31,176,78,75,98,93,55,73,67,44,40,20,45,117,86,76,30,95,53,113,54,83,60,64,61,91,117,73,89,14,102,70,74,85,102,106,97,76,79,91,88,76,105,97,115,4,1 0,202,402,603,792,933,1206,1359,1553,1704,1890,2069,2274,2494,2690,2826,3035,3218,3370,3574,3766,3942,4116,4282,4508,4718,4866,5069,5287,5496,5726,6074,6217,6472,6635,6892,7064,7280,7460,7571,7872,8075,8266,8511,8689,8870,9077,9272,9464,9654,9818,9974,10210,10420,10606,10758,10956,11103,11351,11508,11720,11915,12107,12434,12629,12862,13053,13300,13436,13654,13855,14005,14194,14374,14608,14810,14998,15158,15340,15553,15728,15943,16146,16388,16536 +ptg000001l 57999 71965 m54329U_210323_190418/111871348/ccs + 68 0,28,41,42,180,82,65,26,68,22,16,124,1,48,66,108,22,3,32,74,147,56,48,123,22,118,80,54,131,60,68,41,53,124,75,42,68,92,60,48,52,69,83,255,73,63,57,222,343,226,153,57,257,345,79,48,70,143,44,77,105,289,84,120,54,246,62,1 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+ptg000001l 63954 78146 m54329U_210323_190418/19792629/ccs - 74 0,53,44,95,98,44,43,71,34,55,53,39,86,76,59,130,76,92,58,51,94,102,70,83,59,67,78,44,50,82,62,26,62,50,111,80,62,40,51,65,42,98,62,83,86,45,27,88,76,70,41,63,65,48,52,105,90,33,65,13,75,91,71,82,44,99,53,45,20,10,1,1,16,1 0,117,308,487,712,919,1119,1303,1529,1726,1919,2117,2262,2487,2698,2877,3118,3299,3498,3706,3908,4099,4315,4516,4733,4942,5109,5340,5559,5750,5945,6137,6317,6527,6691,6911,7127,7305,7483,7669,7893,8044,8276,8430,8633,8853,9081,9243,9431,9604,9816,9990,10141,10322,10530,10689,10901,11117,11274,11512,11665,11868,12076,12242,12452,12628,12851,13050,13249,13441,13674,13798,13980,14191 +ptg000001l 64052 92038 m54329U_210323_190418/180357787/ccs - 129 0,51,84,53,18,31,8,12,8,20,15,117,34,10,7,56,54,1,1,1,14,3,34,53,74,1,4,35,40,17,22,41,24,75,64,12,24,33,58,1,77,39,46,36,38,26,30,70,85,75,83,44,23,26,24,47,28,1,58,23,17,8,30,95,57,1,41,1,1,43,42,39,9,1,25,7,69,1,12,88,153,29,26,36,1,82,4,6,48,81,29,14,40,21,23,37,48,103,66,35,26,24,4,81,14,1,68,62,1,13,1,44,24,36,76,9,29,84,2,43,42,82,7,69,20,64,9,33,1 0,203,395,617,839,1021,1243,1440,1615,1790,1972,2123,2533,2774,2989,3172,3368,3568,3771,3933,4099,4312,4470,4666,4866,5087,5285,5469,5654,5841,6020,6219,6411,6581,6809,7032,7207,7403,7571,7802,7995,8376,8553,8762,8960,9158,9341,9506,9706,9904,10099,10326,10698,10904,11119,11282,11491,11697,11852,12039,12225,12395,12758,12956,13304,14245,14432,14613,14825,15009,15200,15402,15611,15984,16338,16535,16905,17134,17326,17480,17809,18117,18299,18488,18698,18854,19085,19298,19469,19671,19929,20120,20312,20507,20738,20953,21122,21302,21540,21723,21960,22164,22355,22721,22961,23183,23337,23545,23684,23781,23983,24121,24535,24711,25036,25261,25443,25619,25870,26244,26430,26631,26860,27052,27272,27454,27683,27857,27985 +ptg000001l 65740 76562 m54329U_210323_190418/45812047/ccs + 53 0,45,55,108,67,103,67,84,70,40,83,46,51,68,254,97,71,8,25,35,79,70,62,93,99,107,75,106,33,114,64,110,52,274,70,70,243,59,84,84,64,35,67,65,50,84,79,124,106,50,69,63,1 0,295,490,653,876,1059,1294,1484,1700,1907,2075,2288,2460,2639,2855,3227,3430,3636,3791,3966,4102,4320,4535,4695,4872,5091,5305,5489,5731,5898,6114,6307,6517,6688,7109,7304,7495,7879,8052,8252,8464,8669,8860,9053,9250,9450,9651,9830,10067,10290,10496,10707,10821 +ptg000001l 70845 81453 m54329U_210323_190418/9503691/ccs - 51 0,21,37,37,69,54,33,61,25,68,20,27,46,43,21,9,32,67,52,47,20,19,19,1,71,25,39,87,29,24,8,35,1,1,56,23,27,31,19,1,1,12,14,71,61,13,1,3,27,28,1 0,79,276,453,627,837,1032,1213,1436,1626,1827,2020,2212,2410,2612,2798,2977,3164,3381,3591,3802,3992,4377,4519,4770,4998,5208,5393,5636,5815,6006,6176,6967,7441,7541,7753,7953,8136,8338,8540,8824,9078,9231,9392,9591,9804,9995,10182,10357,10527,10607 diff --git a/tests/regression/snapshots/regression__extract__extract_nuc.snap b/tests/regression/snapshots/regression__extract__extract_nuc.snap new file mode 100644 index 00000000..6832ac88 --- /dev/null +++ b/tests/regression/snapshots/regression__extract__extract_nuc.snap @@ -0,0 +1,27 @@ +--- +source: tests/regression/extract.rs +expression: "select_bed12_cols(&out, BED12_COLS)" +--- +chrom start end name strand block_count block_sizes block_starts +ptg000001l 306 15696 m54329U_210323_190418/5048829/ccs - 78 0,127,118,116,121,135,111,84,98,114,102,106,127,83,98,115,113,121,114,87,137,121,100,157,137,99,150,145,114,129,107,127,125,117,128,145,131,108,97,142,99,118,180,128,116,123,132,118,124,125,135,121,156,116,147,124,152,145,120,150,115,105,111,117,123,112,153,136,122,125,118,118,81,122,102,139,119,1 0,184,391,621,880,1058,1236,1511,1679,1871,2060,2246,2442,2674,2798,3032,3209,3437,3634,4028,4187,4350,4548,4923,5157,5352,5493,5680,5876,6035,6253,6473,6638,6873,7011,7192,7354,7521,7718,7946,8385,8547,8686,8912,9106,9251,9420,9637,9840,10016,10192,10397,10547,10778,10926,11097,11262,11425,11649,11770,11976,12182,12385,12537,12742,12952,13106,13260,13446,13703,13907,14110,14334,14479,14704,14918,15082,15389 +ptg000001l 832 21833 m54329U_210323_190418/141691444/ccs + 85 0,174,181,275,86,194,156,188,195,161,352,164,160,101,80,320,143,202,155,233,157,176,158,552,178,164,167,78,90,556,678,307,497,145,150,345,155,169,180,158,139,252,159,530,78,307,501,185,183,159,387,177,307,184,178,171,375,164,157,169,177,166,107,417,488,162,371,162,170,159,142,191,399,320,178,188,146,158,329,157,153,108,246,688,1 0,154,329,531,807,908,1123,1282,1477,1687,1849,2249,2414,2593,2700,2816,3190,3334,3550,3709,3979,4151,4354,4533,5096,5304,5507,5681,5760,5868,6431,7140,7480,8010,8156,8362,8708,8884,9064,9280,9439,9583,9850,10017,10558,10637,10945,11447,11656,11879,12062,12473,12651,13004,13199,13393,13608,14010,14178,14392,14616,14806,15071,15202,15626,16150,16365,16737,16937,17108,17302,17478,17683,18083,18413,18619,18808,18955,19171,19504,19672,19833,19942,20189,21000 +ptg000001l 6745 20968 m54329U_210323_190418/175376495/ccs - 72 0,141,119,153,141,147,138,117,146,157,145,164,148,142,132,114,95,105,123,146,144,146,148,311,128,117,138,177,143,131,147,157,136,174,169,143,118,135,157,293,90,142,141,137,162,152,135,151,141,141,167,140,154,203,136,157,160,121,138,153,146,115,146,125,117,123,137,156,163,144,191,1 0,162,353,525,722,899,1066,1259,1480,1657,1879,2062,2236,2428,2619,2845,3020,3237,3475,3617,3795,3992,4221,4370,4745,4970,5147,5335,5580,5749,5946,6122,6348,6513,6718,6903,7099,7292,7482,7700,8110,8280,8466,8668,8857,9049,9268,9428,9639,9836,10036,10241,10439,10594,10853,11024,11218,11424,11591,11771,11981,12223,12399,12596,12780,13006,13200,13361,13568,13812,13968,14222 +ptg000001l 13560 36197 m54329U_210323_190418/32113767/ccs - 115 0,169,139,115,117,135,130,111,109,84,136,139,107,119,127,164,145,144,133,303,130,156,155,145,131,119,117,136,145,121,115,129,130,104,160,143,162,143,147,138,167,157,131,166,136,133,160,136,162,170,129,108,86,127,164,136,109,117,94,131,125,130,159,164,90,118,150,154,145,159,134,146,106,122,132,140,162,150,116,147,138,169,113,146,137,118,89,114,135,129,147,171,137,152,128,124,147,142,142,139,147,177,161,133,146,140,146,166,114,148,175,140,157,146,1 0,190,360,563,759,963,1111,1335,1498,1608,1735,1895,2097,2305,2474,2613,2822,2983,3204,3387,3814,4009,4209,4388,4567,4792,5024,5218,5427,5655,5876,6048,6291,6479,6661,6853,7031,7227,7427,7636,7806,7992,8188,8356,8561,8751,8923,9143,9288,9455,9626,9921,10110,10242,10389,10611,10995,11218,11425,11660,11851,12074,12219,12406,12621,12820,12989,13170,13362,13585,13772,13933,14173,14370,14542,14752,14899,15114,15319,15548,15766,15958,16178,16364,16553,16798,17012,17193,17454,17657,17854,18010,18225,18423,18599,18834,19024,19238,19452,19634,19835,19988,20166,20432,20616,20845,21064,21220,21502,21666,21829,22069,22231,22412,22636 +ptg000001l 14275 40558 m54329U_210323_190418/66718332/ccs + 141 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0,114,114,136,128,192,141,172,127,129,132,126,113,112,139,109,166,143,125,132,115,159,147,317,208,153,147,157,157,117,147,156,134,269,151,96,168,160,148,152,127,142,120,157,119,110,106,166,172,85,126,112,145,145,151,129,113,148,99,121,161,150,159,110,118,113,130,138,109,147,152,144,126,115,129,215,167,516,150,122,116,138,177,134,138,163,143,154,114,133,118,1 0,151,347,552,747,890,1131,1288,1516,1720,1938,2121,2338,2517,2720,2929,3115,3330,3526,3733,3928,4115,4300,4518,4836,5072,5252,5430,5649,5884,6039,6231,6439,6640,6964,7204,7313,7516,7696,7903,8113,8303,8502,8691,8914,9122,9384,9559,9752,9986,10157,10346,10521,10722,10939,11154,11385,11582,11807,12003,12161,12393,12572,12790,12983,13175,13395,13602,13852,14044,14202,14426,14607,14805,15009,15139,15365,15573,16107,16357,16557,16749,16912,17120,17313,17511,17701,17864,18119,18285,18504,18695 +ptg000001l 21207 39362 m54329U_210323_190418/114362450/ccs + 100 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m54329U_210323_190418/43059336/ccs + 48 0,120,148,139,172,145,158,153,186,215,160,158,137,119,118,142,159,153,162,165,132,162,198,128,169,157,158,147,170,132,140,149,298,168,142,160,163,134,225,268,161,157,160,129,155,162,177,1 0,203,404,578,783,956,1164,1323,1487,1674,1890,2052,2222,2432,2614,2800,2975,3174,3372,3559,3769,3935,4103,4333,4480,4691,4904,5102,5263,5475,5667,5869,6077,6383,6552,6733,6922,7110,7245,7471,7747,7916,8099,8272,8454,8631,8875,9232 +ptg000001l 25868 39722 m54329U_210323_190418/10290844/ccs - 71 0,185,144,164,162,175,128,156,168,126,148,100,135,163,169,142,134,139,144,136,151,88,149,134,139,152,134,155,196,152,171,176,167,144,145,155,125,139,115,131,146,183,150,182,163,190,159,162,135,131,169,103,86,167,128,316,156,152,116,144,140,139,138,139,109,150,132,148,148,173,1 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0,150,550,691,840,1056,1269,1436,1649,1847,2037,2220,2438,2619,2778,2967,3358,3559,3767,3984,4176,4395,4619,4806,5004,5174,5546,5706,5923,6120,6309,6531,6722,6904,7082,7300,7479,7848,8004,8212,8370,8584,8803,8982,9176,9549,9692,10077,10230,10414,10597,10777,10953,11168,11315,11514,11700,11873,12235,12416,12600,12797,13005,13233,13419,13810 +ptg000001l 51835 71565 m54329U_210323_190418/143787994/ccs - 98 0,171,167,184,154,167,172,138,184,149,184,143,144,143,139,151,168,140,164,195,130,197,190,185,168,348,147,147,132,161,186,185,134,97,102,161,156,175,102,143,152,141,129,159,157,163,130,154,172,158,129,161,154,149,149,152,147,120,340,141,125,149,123,135,109,143,157,152,172,172,189,146,174,187,159,349,183,153,116,102,87,119,160,148,167,137,130,139,137,163,150,171,381,150,140,136,171,1 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0,195,378,547,714,935,1100,1281,1480,1646,1859,2047,2230,2408,2613,2782,2966,3178,3338,3545,3710,3942,4077,4258,4443,4662,4875,5071,5319,5511,5677,5869,6042,6237,6420,6623,6823,7017,7192,7355,7575,7777,7969,8168,8373,8570,8757,8917,9161,9364,9547,9736,9951,10151,10370,10589,10795,10966,11134,11392,11611,11798,11974,12199,12406,12600,12784,13023,13210,13400,13570,13776,13962,14178,14380,14552,14752,14948,15162,15343,15537,15738,15889,16074,16309,16481,16701,16882,17064,17313,17476,17665,17840,18057,18244,18376,18561,18750,18935,19086,19260,19578 +ptg000001l 56406 72943 m54329U_210323_190418/54199156/ccs - 85 0,131,107,117,114,105,161,118,146,141,141,125,140,205,106,116,106,119,142,111,126,126,115,133,143,114,107,100,128,121,119,293,103,142,92,125,141,113,96,80,125,125,116,147,85,126,134,128,148,150,144,111,119,124,110,122,103,94,135,103,129,135,128,266,104,116,118,158,122,116,131,76,104,78,128,105,112,81,91,125,99,110,106,127,1 0,71,295,486,678,828,1045,1241,1407,1563,1749,1944,2134,2289,2584,2710,2929,3099,3228,3463,3640,3816,4001,4149,4365,4604,4759,4969,5159,5375,5607,5781,6114,6330,6543,6767,6923,7167,7364,7491,7747,7950,8150,8364,8604,8744,8943,9144,9316,9504,9674,9863,10091,10296,10496,10636,10853,11009,11216,11405,11591,11780,11979,12168,12525,12746,12935,13142,13314,13538,13724,13929,14090,14296,14480,14705,14886,15077,15249,15428,15629,15833,16040,16261,16536 +ptg000001l 57999 71965 m54329U_210323_190418/111871348/ccs + 67 0,156,78,129,94,104,119,121,117,159,144,160,97,104,125,123,88,75,109,130,94,110,129,147,143,101,108,88,120,132,134,135,104,77,119,150,96,114,129,115,140,110,132,109,111,114,151,99,99,90,98,131,118,115,106,118,112,102,112,117,93,81,79,80,117,106,1 0,201,398,518,827,1003,1172,1317,1506,1645,1820,2088,2249,2394,2564,2797,2942,3033,3140,3323,3600,3750,3908,4160,4329,4590,4771,4933,5152,5332,5532,5707,5895,6123,6275,6436,6654,6842,7016,7193,7360,7569,7762,8149,8331,8505,8676,9049,9491,9816,10059,10214,10602,11065,11259,11413,11601,11856,12002,12191,12413,12795,12960,13159,13293,13656,13965 +ptg000001l 58014 74219 m54329U_210323_190418/14615259/ccs + 67 0,297,167,119,135,148,311,205,146,142,147,265,273,207,149,158,168,268,102,87,88,185,176,136,103,111,136,97,99,104,97,115,115,100,107,116,129,92,108,93,117,89,117,123,145,85,97,113,89,117,106,98,84,81,78,108,122,116,100,77,102,103,102,87,84,111,1 0,225,597,812,988,1209,1375,1687,1907,2105,2275,2541,2875,3201,3486,3671,3850,4087,4456,5135,5329,5528,5727,5936,6101,6339,6522,6722,7144,7346,7503,7713,7931,8121,8285,8458,8688,8818,9007,9175,9395,9607,10168,10377,10560,10777,10972,11176,11388,11573,11747,12159,12365,12765,13029,13610,13766,13931,14143,14321,14678,14894,15055,15518,15678,15874,16204 +ptg000001l 63954 78146 m54329U_210323_190418/19792629/ccs - 74 0,138,135,130,109,156,141,155,163,138,145,106,139,135,120,111,105,107,150,151,97,114,131,134,150,100,153,175,141,113,130,154,148,114,109,136,116,138,135,159,109,134,92,120,134,183,135,100,97,142,133,88,116,160,107,107,126,124,173,140,128,117,95,128,132,124,146,154,172,223,123,181,145,1 0,170,352,582,810,963,1162,1374,1563,1781,1972,2156,2348,2563,2757,3007,3194,3391,3556,3757,4002,4201,4385,4599,4792,5009,5187,5384,5609,5832,6007,6163,6379,6577,6802,6991,7189,7345,7534,7734,7935,8142,8338,8513,8719,8898,9108,9331,9507,9674,9857,10053,10206,10370,10582,10794,10991,11150,11339,11525,11740,11959,12147,12324,12496,12727,12904,13095,13269,13451,13675,13799,13996,14191 +ptg000001l 64052 92038 m54329U_210323_190418/180357787/ccs - 129 0,144,141,138,169,164,191,189,163,167,162,136,293,207,205,176,140,146,202,161,165,199,155,162,147,147,197,180,150,147,162,177,151,146,153,159,163,172,135,173,192,304,138,163,162,160,157,135,130,113,120,144,328,183,189,139,162,178,154,129,163,153,355,168,253,884,186,140,211,183,148,160,170,364,353,172,363,160,191,142,241,155,153,163,174,155,149,209,165,154,177,162,178,155,210,192,132,132,135,117,202,178,167,362,159,208,153,140,77,96,189,137,370,152,289,149,173,147,167,372,143,159,147,185,151,162,165,165,1 0,59,254,479,670,857,1052,1251,1452,1623,1810,1987,2240,2567,2784,2996,3228,3422,3569,3772,3934,4113,4315,4504,4719,4940,5088,5289,5504,5694,5858,6042,6260,6435,6656,6873,7044,7231,7436,7629,7803,8072,8415,8599,8798,8998,9184,9371,9576,9791,9979,10182,10370,10721,10930,11143,11329,11519,11698,11910,12062,12242,12403,12788,13051,13361,14246,14473,14614,14826,15052,15242,15441,15620,15985,16363,16542,16974,17135,17338,17568,17962,18146,18325,18524,18699,18936,19089,19304,19517,19752,19958,20134,20352,20528,20761,20990,21170,21405,21606,21758,21986,22188,22359,22802,22975,23184,23405,23607,23685,23794,23984,24165,24559,24747,25112,25270,25472,25703,25872,26287,26472,26713,26867,27121,27292,27518,27692,27985 +ptg000001l 65740 76562 m54329U_210323_190418/45812047/ccs + 53 0,145,150,108,115,116,132,123,132,137,128,130,126,128,148,118,106,135,147,150,101,139,145,98,84,120,107,109,136,134,102,129,100,119,147,125,121,141,114,116,128,141,156,126,132,150,117,100,113,117,156,142,1 0,150,340,545,761,943,1162,1361,1568,1770,1947,2158,2334,2511,2707,3109,3324,3501,3644,3816,4001,4181,4390,4597,4788,4971,5198,5380,5595,5764,6012,6178,6417,6569,6962,7179,7374,7738,7938,8136,8336,8528,8704,8927,9118,9300,9534,9730,9954,10173,10340,10565,10821 +ptg000001l 70845 81453 m54329U_210323_190418/9503691/ccs - 50 0,176,140,137,141,141,148,162,165,133,173,165,152,159,165,170,155,150,158,164,170,366,123,250,157,185,146,156,150,167,162,756,473,99,156,177,156,171,183,283,253,141,147,128,152,178,186,172,143,1 0,100,313,490,696,891,1065,1274,1461,1694,1847,2047,2258,2453,2633,2807,3009,3231,3433,3638,3822,4011,4396,4520,4841,5023,5247,5480,5665,5839,6014,6211,6968,7442,7597,7776,7980,8167,8357,8541,8825,9090,9245,9463,9652,9817,9996,10185,10384,10607 diff --git a/tests/regression/snapshots/regression__fire__fire_feats_to_text.snap b/tests/regression/snapshots/regression__fire__fire_feats_to_text.snap new file mode 100644 index 00000000..a7140018 --- /dev/null +++ b/tests/regression/snapshots/regression__fire__fire_feats_to_text.snap @@ -0,0 +1,327 @@ +--- +source: tests/regression/fire.rs +expression: "select_tsv_cols(&out,\n&[\"#chrom\", \"start\", \"end\", \"fiber\", \"msp_len\", \"ccs_passes\",\n\"fiber_m6a_count\", \"msp_m6a_count\", \"msp_frac_m6a\", \"msp_m6a_fc\",\n\"best_m6a_count\", \"best_frac_m6a\",])" +--- +#chrom start end fiber msp_len ccs_passes fiber_m6a_count msp_m6a_count msp_frac_m6a msp_m6a_fc best_m6a_count best_frac_m6a +ptg000001l 815 927 m54329U_210323_190418/5048829/ccs 114 5.10592 1541 27 0.3375 1.0716761 0 0 +ptg000001l 1043 1186 m54329U_210323_190418/5048829/ccs 143 5.10592 1541 46 0.44660193 1.4757781 0 0 +ptg000001l 1653 1817 m54329U_210323_190418/5048829/ccs 166 5.10592 1541 47 0.5802469 1.8534555 0 0 +ptg000001l 1901 1985 m54329U_210323_190418/5048829/ccs 86 5.10592 1541 30 0.6 1.9017512 0 0 +ptg000001l 2083 2177 m54329U_210323_190418/5048829/ccs 95 5.10592 1541 36 0.6 1.9017512 0 0 +ptg000001l 2468 2552 m54329U_210323_190418/5048829/ccs 85 5.10592 1541 17 0.3617021 1.1715907 0 0 +ptg000001l 2658 2748 m54329U_210323_190418/5048829/ccs 91 5.10592 1541 32 0.61538464 1.938277 0 0 +ptg000001l 2875 2980 m54329U_210323_190418/5048829/ccs 105 5.10592 1541 27 0.44262296 1.4628668 0 0 +ptg000001l 3202 3338 m54329U_210323_190418/5048829/ccs 138 5.10592 1541 38 0.42696628 1.4109107 0 0 +ptg000001l 3628 3743 m54329U_210323_190418/5048829/ccs 120 5.10592 1541 33 0.5322581 1.7289145 0 0 +ptg000001l 4054 4334 m54329U_210323_190418/5048829/ccs 283 5.10592 1541 58 0.32768363 1.0290921 32 0.50793654 +ptg000001l 4954 5229 m54329U_210323_190418/5048829/ccs 284 5.10592 1541 57 0.456 1.5058223 28 0.62222224 +ptg000001l 6470 6559 m54329U_210323_190418/5048829/ccs 89 5.10592 1541 25 0.48076922 1.5821332 0 0 +ptg000001l 6666 6779 m54329U_210323_190418/5048829/ccs 115 5.10592 1541 36 0.4864865 1.5991882 0 0 +ptg000001l 7069 7179 m54329U_210323_190418/5048829/ccs 113 5.10592 1541 43 0.56578946 1.8170539 0 0 +ptg000001l 7935 8024 m54329U_210323_190418/5048829/ccs 89 5.10592 1541 23 0.40350878 1.3293885 0 0 +ptg000001l 8121 8252 m54329U_210323_190418/5048829/ccs 133 5.10592 1541 37 0.5138889 1.6782451 0 0 +ptg000001l 8394 8691 m54329U_210323_190418/5048829/ccs 298 5.10592 1541 58 0.3152174 0.9731357 30 0.5084746 +ptg000001l 9858 9943 m54329U_210323_190418/5048829/ccs 86 5.10592 1541 22 0.42307693 1.3977085 0 0 +ptg000001l 12397 12488 m54329U_210323_190418/5048829/ccs 91 5.10592 1541 13 0.21311475 0.408419 0 0 +ptg000001l 12593 12691 m54329U_210323_190418/5048829/ccs 98 5.10592 1541 22 0.44 1.4542922 0 0 +ptg000001l 12960 13048 m54329U_210323_190418/5048829/ccs 88 5.10592 1541 27 0.5294118 1.7211789 0 0 +ptg000001l 13171 13258 m54329U_210323_190418/5048829/ccs 89 5.10592 1541 24 0.55813956 1.7974143 0 0 +ptg000001l 13874 14009 m54329U_210323_190418/5048829/ccs 137 5.10592 1541 22 0.20754717 0.37022778 0 0 +ptg000001l 14331 14416 m54329U_210323_190418/5048829/ccs 87 5.10592 1541 29 0.59183675 1.8819878 0 0 +ptg000001l 14534 14640 m54329U_210323_190418/5048829/ccs 107 5.10592 1541 19 0.25675675 0.6771908 0 0 +ptg000001l 14907 15010 m54329U_210323_190418/5048829/ccs 107 5.10592 1541 19 0.27941176 0.7991813 0 0 +ptg000001l 15112 15224 m54329U_210323_190418/5048829/ccs 118 5.10592 1541 32 0.53333336 1.7318262 0 0 +ptg000001l 15507 15592 m54329U_210323_190418/5048829/ccs 87 5.10592 1541 18 0.28125 0.8086417 0 0 +ptg000001l 15804 15903 m54329U_210323_190418/141691444/ccs 99 6.68585 319 16 0.36363637 3.8812556 0 0 +ptg000001l 8121 8225 m54329U_210323_190418/175376495/ccs 104 5.97797 890 26 0.47272727 2.2088814 0 0 +ptg000001l 9496 9590 m54329U_210323_190418/175376495/ccs 94 5.97797 890 24 0.6315789 2.6268363 0 0 +ptg000001l 9860 9982 m54329U_210323_190418/175376495/ccs 123 5.97797 890 37 0.5138889 2.3293297 0 0 +ptg000001l 10087 10220 m54329U_210323_190418/175376495/ccs 135 5.97797 890 42 0.4883721 2.255854 0 0 +ptg000001l 11618 11715 m54329U_210323_190418/175376495/ccs 103 5.97797 890 19 0.40425533 1.98314 0 0 +ptg000001l 14738 14855 m54329U_210323_190418/175376495/ccs 117 5.97797 890 27 0.3857143 1.9154059 0 0 +ptg000001l 18872 18968 m54329U_210323_190418/175376495/ccs 97 5.97797 890 30 0.5882353 2.5242665 0 0 +ptg000001l 19642 19751 m54329U_210323_190418/175376495/ccs 109 5.97797 890 28 0.4827586 2.2391753 0 0 +ptg000001l 14436 14523 m54329U_210323_190418/32113767/ccs 87 7.41424 1694 22 0.57894737 2.213419 0 0 +ptg000001l 14801 14895 m54329U_210323_190418/32113767/ccs 94 7.41424 1694 37 0.6727273 2.4300086 0 0 +ptg000001l 15764 15865 m54329U_210323_190418/32113767/ccs 102 7.41424 1694 21 0.4883721 1.9679676 0 0 +ptg000001l 17250 17374 m54329U_210323_190418/32113767/ccs 124 7.41424 1694 27 0.3068182 1.2973708 0 0 +ptg000001l 18258 18352 m54329U_210323_190418/32113767/ccs 94 7.41424 1694 26 0.5 2.001915 0 0 +ptg000001l 18471 18584 m54329U_210323_190418/32113767/ccs 113 7.41424 1694 36 0.75 2.5868773 0 0 +ptg000001l 19336 19436 m54329U_210323_190418/32113767/ccs 100 7.41424 1694 20 0.3448276 1.465862 0 0 +ptg000001l 19737 19851 m54329U_210323_190418/32113767/ccs 114 7.41424 1694 23 0.32857144 1.3961939 0 0 +ptg000001l 23315 23481 m54329U_210323_190418/32113767/ccs 165 7.41424 1694 57 0.7916667 2.66488 0 0 +ptg000001l 24307 24555 m54329U_210323_190418/32113767/ccs 248 7.41424 1694 43 0.30935252 1.3092386 21 0.30882353 +ptg000001l 24664 24778 m54329U_210323_190418/32113767/ccs 115 7.41424 1694 28 0.41791046 1.7431806 0 0 +ptg000001l 24895 24985 m54329U_210323_190418/32113767/ccs 90 7.41424 1694 26 0.41269842 1.7250746 0 0 +ptg000001l 25079 25220 m54329U_210323_190418/32113767/ccs 141 7.41424 1694 31 0.43661973 1.8063642 0 0 +ptg000001l 25536 25634 m54329U_210323_190418/32113767/ccs 98 7.41424 1694 24 0.40677965 1.7042344 0 0 +ptg000001l 26271 26380 m54329U_210323_190418/32113767/ccs 109 7.41424 1694 20 0.33898306 1.4411999 0 0 +ptg000001l 27639 27733 m54329U_210323_190418/32113767/ccs 94 7.41424 1694 21 0.5833333 2.2243073 0 0 +ptg000001l 27839 27930 m54329U_210323_190418/32113767/ccs 91 7.41424 1694 27 0.7941176 2.6693394 0 0 +ptg000001l 28995 29108 m54329U_210323_190418/32113767/ccs 113 7.41424 1694 31 0.4920635 1.9788313 0 0 +ptg000001l 30250 30358 m54329U_210323_190418/32113767/ccs 108 7.41424 1694 33 0.5409836 2.1155717 0 0 +ptg000001l 30476 30572 m54329U_210323_190418/32113767/ccs 96 7.41424 1694 31 0.5849057 2.2281907 0 0 +ptg000001l 30661 30753 m54329U_210323_190418/32113767/ccs 92 7.41424 1694 23 0.5897436 2.2400746 0 0 +ptg000001l 30867 31014 m54329U_210323_190418/32113767/ccs 147 7.41424 1694 46 0.575 2.2035487 0 0 +ptg000001l 32287 32394 m54329U_210323_190418/32113767/ccs 107 7.41424 1694 29 0.41428572 1.7306129 0 0 +ptg000001l 33887 33992 m54329U_210323_190418/32113767/ccs 105 7.41424 1694 16 0.23880596 0.9358258 0 0 +ptg000001l 34946 35062 m54329U_210323_190418/32113767/ccs 116 7.41424 1694 36 0.5538462 2.149472 0 0 +ptg000001l 15832 15971 m54329U_210323_190418/66718332/ccs 137 5.1414 1080 19 0.25 1.8525352 0 0 +ptg000001l 16879 16975 m54329U_210323_190418/66718332/ccs 96 5.1414 1080 11 0.18032786 1.3812295 0 0 +ptg000001l 17431 17517 m54329U_210323_190418/66718332/ccs 86 5.1414 1080 9 0.16363636 1.2411005 0 0 +ptg000001l 18866 18958 m54329U_210323_190418/66718332/ccs 92 5.1414 1080 9 0.1764706 1.3500351 0 0 +ptg000001l 23873 23962 m54329U_210323_190418/66718332/ccs 89 5.1414 1080 6 0.1 0.5306072 0 0 +ptg000001l 25581 25668 m54329U_210323_190418/66718332/ccs 87 5.1414 1080 10 0.18181819 1.3931037 0 0 +ptg000001l 28540 28632 m54329U_210323_190418/66718332/ccs 92 5.1414 1080 15 0.24590164 1.8286884 0 0 +ptg000001l 32006 32091 m54329U_210323_190418/66718332/ccs 86 5.1414 1080 9 0.16363636 1.2411005 0 0 +ptg000001l 32422 32529 m54329U_210323_190418/66718332/ccs 108 5.1414 1080 7 0.084337346 0.28485078 0 0 +ptg000001l 36406 36506 m54329U_210323_190418/66718332/ccs 101 5.1414 1080 20 0.4347826 2.6509013 0 0 +ptg000001l 37185 37305 m54329U_210323_190418/66718332/ccs 122 5.1414 1080 14 0.25925925 1.9050027 0 0 +ptg000001l 37588 37684 m54329U_210323_190418/66718332/ccs 96 5.1414 1080 13 0.19117647 1.4655122 0 0 +ptg000001l 38220 38416 m54329U_210323_190418/66718332/ccs 197 5.1414 1080 14 0.123893805 0.83971125 0 0 +ptg000001l 16490 16581 m54329U_210323_190418/90833781/ccs 91 8.7762 1360 17 0.25757575 1.0979681 0 0 +ptg000001l 17878 17967 m54329U_210323_190418/90833781/ccs 89 8.7762 1360 27 0.48214287 2.002432 0 0 +ptg000001l 18276 18367 m54329U_210323_190418/90833781/ccs 91 8.7762 1360 25 0.5208333 2.1137931 0 0 +ptg000001l 18658 18749 m54329U_210323_190418/90833781/ccs 93 8.7762 1360 28 0.6363636 2.402823 0 0 +ptg000001l 23144 23233 m54329U_210323_190418/90833781/ccs 89 8.7762 1360 25 0.49019608 2.0263302 0 0 +ptg000001l 25062 25151 m54329U_210323_190418/90833781/ccs 89 8.7762 1360 28 0.62222224 2.3704014 0 0 +ptg000001l 25261 25413 m54329U_210323_190418/90833781/ccs 153 8.7762 1360 46 0.47916666 1.9934989 0 0 +ptg000001l 26100 26186 m54329U_210323_190418/90833781/ccs 86 8.7762 1360 33 0.78571427 2.7069762 0 0 +ptg000001l 27312 27414 m54329U_210323_190418/90833781/ccs 102 8.7762 1360 21 0.36206895 1.589236 0 0 +ptg000001l 27935 28032 m54329U_210323_190418/90833781/ccs 97 8.7762 1360 24 0.55813956 2.2135973 0 0 +ptg000001l 29317 29424 m54329U_210323_190418/90833781/ccs 108 8.7762 1360 31 0.484375 2.009096 0 0 +ptg000001l 29769 29881 m54329U_210323_190418/90833781/ccs 112 8.7762 1360 42 0.89361703 2.892628 0 0 +ptg000001l 30949 31038 m54329U_210323_190418/90833781/ccs 91 8.7762 1360 18 0.33333334 1.469937 0 0 +ptg000001l 32286 32386 m54329U_210323_190418/90833781/ccs 100 8.7762 1360 25 0.3846154 1.6763879 0 0 +ptg000001l 34047 34148 m54329U_210323_190418/90833781/ccs 101 8.7762 1360 6 0.09677419 -0.3143343 0 0 +ptg000001l 34447 34533 m54329U_210323_190418/90833781/ccs 87 8.7762 1360 12 0.21818182 0.8585022 0 0 +ptg000001l 21903 21989 m54329U_210323_190418/114362450/ccs 86 8.95984 1375 24 0.72727275 2.522753 0 0 +ptg000001l 24848 24963 m54329U_210323_190418/114362450/ccs 115 8.95984 1375 29 0.3493976 1.4651263 0 0 +ptg000001l 25237 25325 m54329U_210323_190418/114362450/ccs 88 8.95984 1375 37 0.8043478 2.668076 0 0 +ptg000001l 26398 26505 m54329U_210323_190418/114362450/ccs 107 8.95984 1375 33 0.45833334 1.8566538 0 0 +ptg000001l 26627 26719 m54329U_210323_190418/114362450/ccs 92 8.95984 1375 27 0.7941176 2.6496096 0 0 +ptg000001l 27388 27488 m54329U_210323_190418/114362450/ccs 100 8.95984 1375 25 0.54347825 2.102479 0 0 +ptg000001l 27990 28254 m54329U_210323_190418/114362450/ccs 264 8.95984 1375 55 0.43650794 1.7862644 29 0.65909094 +ptg000001l 29988 30075 m54329U_210323_190418/114362450/ccs 87 8.95984 1375 20 0.3508772 1.4712228 0 0 +ptg000001l 30392 30477 m54329U_210323_190418/114362450/ccs 85 8.95984 1375 26 0.5777778 2.1907713 0 0 +ptg000001l 36370 36465 m54329U_210323_190418/114362450/ccs 96 8.95984 1375 29 0.64444447 2.3483126 0 0 +ptg000001l 24664 24770 m54329U_210323_190418/85459034/ccs 106 7.2977 2024 22 0.34375 1.0751884 0 0 +ptg000001l 25079 25201 m54329U_210323_190418/85459034/ccs 123 7.2977 2024 40 0.625 1.9376849 0 0 +ptg000001l 25335 25429 m54329U_210323_190418/85459034/ccs 94 7.2977 2024 27 0.44262296 1.439907 0 0 +ptg000001l 25538 25624 m54329U_210323_190418/85459034/ccs 86 7.2977 2024 17 0.3148148 0.94833213 0 0 +ptg000001l 26088 26305 m54329U_210323_190418/85459034/ccs 218 7.2977 2024 93 0.81578946 2.3220255 50 0.90909094 +ptg000001l 26533 26625 m54329U_210323_190418/85459034/ccs 94 7.2977 2024 22 0.44 1.4313322 0 0 +ptg000001l 26750 26845 m54329U_210323_190418/85459034/ccs 94 7.2977 2024 22 0.55 1.7532604 0 0 +ptg000001l 27294 27428 m54329U_210323_190418/85459034/ccs 133 7.2977 2024 36 0.51428574 1.6563988 0 0 +ptg000001l 27511 27616 m54329U_210323_190418/85459034/ccs 105 7.2977 2024 36 0.6 1.8787913 0 0 +ptg000001l 27744 28045 m54329U_210323_190418/85459034/ccs 300 7.2977 2024 75 0.5813953 1.8333483 38 0.8636364 +ptg000001l 28167 28282 m54329U_210323_190418/85459034/ccs 116 7.2977 2024 29 0.43939394 1.4293437 0 0 +ptg000001l 29564 29651 m54329U_210323_190418/85459034/ccs 87 7.2977 2024 25 0.43103448 1.401632 0 0 +ptg000001l 29769 29877 m54329U_210323_190418/85459034/ccs 108 7.2977 2024 37 0.8043478 2.3016481 0 0 +ptg000001l 30388 30475 m54329U_210323_190418/85459034/ccs 87 7.2977 2024 27 0.5744681 1.8160554 0 0 +ptg000001l 30597 30694 m54329U_210323_190418/85459034/ccs 97 7.2977 2024 35 0.9459459 2.5355864 0 0 +ptg000001l 30960 31080 m54329U_210323_190418/85459034/ccs 120 7.2977 2024 23 0.31506848 0.94949424 0 0 +ptg000001l 31155 31240 m54329U_210323_190418/85459034/ccs 85 7.2977 2024 20 0.36363637 1.1563252 0 0 +ptg000001l 32325 32418 m54329U_210323_190418/85459034/ccs 93 7.2977 2024 15 0.23076923 0.50027955 0 0 +ptg000001l 33365 33452 m54329U_210323_190418/85459034/ccs 87 7.2977 2024 21 0.61764705 1.9206114 0 0 +ptg000001l 33916 34061 m54329U_210323_190418/85459034/ccs 145 7.2977 2024 57 0.64044946 1.9729134 0 0 +ptg000001l 36798 36893 m54329U_210323_190418/85459034/ccs 95 7.2977 2024 26 0.4 1.2938287 0 0 +ptg000001l 37164 37270 m54329U_210323_190418/85459034/ccs 106 7.2977 2024 33 0.80487806 2.302599 0 0 +ptg000001l 37570 37885 m54329U_210323_190418/85459034/ccs 317 7.2977 2024 73 0.37823835 1.2131244 33 0.6875 +ptg000001l 37972 38074 m54329U_210323_190418/85459034/ccs 103 7.2977 2024 20 0.25 0.6157568 0 0 +ptg000001l 39513 39610 m54329U_210323_190418/85459034/ccs 97 7.2977 2024 32 0.64 1.9719006 0 0 +ptg000001l 39931 40022 m54329U_210323_190418/85459034/ccs 90 7.2977 2024 19 0.38 1.219828 0 0 +ptg000001l 40467 40569 m54329U_210323_190418/85459034/ccs 102 7.2977 2024 14 0.2857143 0.8084019 0 0 +ptg000001l 40698 40783 m54329U_210323_190418/85459034/ccs 85 7.2977 2024 19 0.38 1.219828 0 0 +ptg000001l 41216 41361 m54329U_210323_190418/85459034/ccs 144 7.2977 2024 45 0.45918366 1.4929001 0 0 +ptg000001l 41455 41551 m54329U_210323_190418/85459034/ccs 97 7.2977 2024 28 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10.3524 1169 21 0.53846157 1.987486 0 0 +ptg000001l 73197 73285 m54329U_210323_190418/19792629/ccs 88 10.3524 1169 24 0.6666667 2.2956083 0 0 +ptg000001l 74643 74748 m54329U_210323_190418/19792629/ccs 105 10.3524 1169 31 0.5 1.8805707 0 0 +ptg000001l 74855 74945 m54329U_210323_190418/19792629/ccs 89 10.3524 1169 25 0.37878788 1.4800328 0 0 +ptg000001l 75822 75913 m54329U_210323_190418/19792629/ccs 91 10.3524 1169 27 0.6 2.1436052 0 0 +ptg000001l 76582 76681 m54329U_210323_190418/19792629/ccs 99 10.3524 1169 39 0.61904764 2.188693 0 0 +ptg000001l 66175 66292 m54329U_210323_190418/180357787/ccs 117 6.4457 804 9 0.125 1.4546113 0 0 +ptg000001l 73758 73843 m54329U_210323_190418/180357787/ccs 85 6.4457 804 23 0.52272725 3.5187418 0 0 +ptg000001l 77008 77103 m54329U_210323_190418/180357787/ccs 95 6.4457 804 8 0.13793103 1.5966303 0 0 +ptg000001l 81532 81620 m54329U_210323_190418/180357787/ccs 88 6.4457 804 10 0.15384616 1.7541717 0 0 +ptg000001l 81861 82014 m54329U_210323_190418/180357787/ccs 155 6.4457 804 13 0.108333334 1.2481605 0 0 +ptg000001l 85354 85457 m54329U_210323_190418/180357787/ccs 102 6.4457 804 22 0.44 3.270187 0 0 +ptg000001l 89671 89755 m54329U_210323_190418/180357787/ccs 85 6.4457 804 8 0.14285715 1.6472565 0 0 +ptg000001l 66393 66501 m54329U_210323_190418/45812047/ccs 108 18.9546 1177 20 0.33898306 0.8912314 0 0 +ptg000001l 66799 66902 m54329U_210323_190418/45812047/ccs 103 18.9546 1177 32 0.5614035 1.6190563 0 0 +ptg000001l 68595 68849 m54329U_210323_190418/45812047/ccs 254 18.9546 1177 55 0.37931034 1.0533969 27 0.46551725 +ptg000001l 68967 69064 m54329U_210323_190418/45812047/ccs 97 18.9546 1177 22 0.4074074 1.1564904 0 0 +ptg000001l 70435 70528 m54329U_210323_190418/45812047/ccs 93 18.9546 1177 32 0.6956522 1.9283844 0 0 +ptg000001l 70612 70711 m54329U_210323_190418/45812047/ccs 99 18.9546 1177 34 0.6938776 1.9246993 0 0 +ptg000001l 70831 70938 m54329U_210323_190418/45812047/ccs 107 18.9546 1177 38 0.6031746 1.7225939 0 0 +ptg000001l 71229 71335 m54329U_210323_190418/45812047/ccs 106 18.9546 1177 24 0.47058824 1.3644835 0 0 +ptg000001l 71638 71752 m54329U_210323_190418/45812047/ccs 114 18.9546 1177 33 0.64705884 1.8239151 0 0 +ptg000001l 72047 72157 m54329U_210323_190418/45812047/ccs 110 18.9546 1177 23 0.37096775 1.021312 0 0 +ptg000001l 72428 72702 m54329U_210323_190418/45812047/ccs 274 18.9546 1177 58 0.36708862 1.0061467 29 0.47540984 +ptg000001l 73235 73478 m54329U_210323_190418/45812047/ccs 243 18.9546 1177 49 0.41880342 1.1962916 26 0.60465115 +ptg000001l 75570 75694 m54329U_210323_190418/45812047/ccs 124 18.9546 1177 45 0.6923077 1.9214317 0 0 +ptg000001l 75807 75913 m54329U_210323_190418/45812047/ccs 106 18.9546 1177 34 0.6415094 1.8114886 0 0 +ptg000001l 76238 76325 m54329U_210323_190418/9503691/ccs 87 9.64637 325 9 0.14754099 1.6407762 0 0 diff --git a/tests/regression/snapshots/regression__pileup__pileup_default.snap b/tests/regression/snapshots/regression__pileup__pileup_default.snap new file mode 100644 index 00000000..441af8af --- /dev/null +++ b/tests/regression/snapshots/regression__pileup__pileup_default.snap @@ -0,0 +1,3420 @@ +--- +source: tests/regression/pileup.rs +expression: "select_tsv_cols(&out,\n&[\"#chrom\", \"start\", \"end\", \"coverage\", \"fire_coverage\", \"score\",\n\"nuc_coverage\", \"msp_coverage\",])" +--- +#chrom start end coverage fire_coverage score nuc_coverage msp_coverage +ptg000001l 306 466 1 0 -1 0 0 +ptg000001l 466 490 1 0 -1 0 1 +ptg000001l 490 617 1 0 -1 1 0 +ptg000001l 617 697 1 0 -1 0 1 +ptg000001l 697 815 1 0 -1 1 0 +ptg000001l 815 832 1 0 -1 0 1 +ptg000001l 832 927 2 0 -1 0 1 +ptg000001l 927 985 2 0 -1 1 0 +ptg000001l 985 986 2 0 -1 1 1 +ptg000001l 986 1043 2 0 -1 2 0 +ptg000001l 1043 1160 2 0 -1 1 1 +ptg000001l 1160 1161 2 0 -1 0 2 +ptg000001l 1161 1186 2 0 -1 1 1 +ptg000001l 1186 1307 2 0 -1 2 0 +ptg000001l 1307 1342 2 0 -1 1 1 +ptg000001l 1342 1363 2 0 -1 0 2 +ptg000001l 1363 1364 2 0 -1 1 1 +ptg000001l 1364 1499 2 0 -1 2 0 +ptg000001l 1499 1542 2 0 -1 1 1 +ptg000001l 1542 1638 2 0 -1 2 0 +ptg000001l 1638 1639 2 0 -1 1 1 +ptg000001l 1639 1653 2 0 -1 2 0 +ptg000001l 1653 1725 2 0 -1 1 1 +ptg000001l 1725 1740 2 0 -1 0 2 +ptg000001l 1740 1817 2 0 -1 1 1 +ptg000001l 1817 1901 2 0 -1 2 0 +ptg000001l 1901 1934 2 0 -1 1 1 +ptg000001l 1934 1955 2 0 -1 0 2 +ptg000001l 1955 1985 2 0 -1 1 1 +ptg000001l 1985 2083 2 0 -1 2 0 +ptg000001l 2083 2111 2 0 -1 1 1 +ptg000001l 2111 2114 2 0 -1 0 2 +ptg000001l 2114 2177 2 0 -1 1 1 +ptg000001l 2177 2291 2 0 -1 2 0 +ptg000001l 2291 2302 2 0 -1 1 1 +ptg000001l 2302 2309 2 0 -1 0 2 +ptg000001l 2309 2366 2 0 -1 1 1 +ptg000001l 2366 2468 2 0 -1 2 0 +ptg000001l 2468 2504 2 0 -1 1 1 +ptg000001l 2504 2519 2 0 -1 0 2 +ptg000001l 2519 2552 2 0 -1 1 1 +ptg000001l 2552 2658 2 0 -1 2 0 +ptg000001l 2658 2680 2 0 -1 1 1 +ptg000001l 2680 2681 2 0 -1 0 2 +ptg000001l 2681 2748 2 0 -1 1 1 +ptg000001l 2748 2875 2 0 -1 2 0 +ptg000001l 2875 2980 2 0 -1 1 1 +ptg000001l 2980 3033 2 0 -1 2 0 +ptg000001l 3033 3063 2 0 -1 1 1 +ptg000001l 3063 3081 2 0 -1 0 2 +ptg000001l 3081 3104 2 0 -1 1 1 +ptg000001l 3104 3202 2 0 -1 2 0 +ptg000001l 3202 3245 2 0 -1 1 1 +ptg000001l 3245 3246 2 0 -1 0 2 +ptg000001l 3246 3338 2 0 -1 1 1 +ptg000001l 3338 3406 2 0 -1 2 0 +ptg000001l 3406 3425 2 0 -1 1 1 +ptg000001l 3425 3453 2 0 -1 2 0 +ptg000001l 3453 3515 2 0 -1 1 1 +ptg000001l 3515 3526 2 0 -1 2 0 +ptg000001l 3526 3532 2 0 -1 1 1 +ptg000001l 3532 3612 2 0 -1 2 0 +ptg000001l 3612 3628 2 0 -1 1 1 +ptg000001l 3628 3648 2 0 -1 0 2 +ptg000001l 3648 3743 2 0 -1 1 1 +ptg000001l 3743 3864 2 0 -1 2 0 +ptg000001l 3864 3940 2 0 -1 1 1 +ptg000001l 3940 3968 2 0 -1 2 0 +ptg000001l 3968 4022 2 0 -1 1 1 +ptg000001l 4022 4054 2 0 -1 2 0 +ptg000001l 4054 4165 2 0 -1 1 1 +ptg000001l 4165 4166 2 0 -1 0 2 +ptg000001l 4166 4334 2 0 -1 1 1 +ptg000001l 4334 4368 2 0 -1 2 0 +ptg000001l 4368 4382 2 0 -1 1 1 +ptg000001l 4382 4421 2 0 -1 2 0 +ptg000001l 4421 4493 2 0 -1 1 1 +ptg000001l 4493 4537 2 0 -1 2 0 +ptg000001l 4537 4541 2 0 -1 1 1 +ptg000001l 4541 4630 2 0 -1 2 0 +ptg000001l 4630 4656 2 0 -1 1 1 +ptg000001l 4656 4774 2 0 -1 2 0 +ptg000001l 4774 4777 2 0 -1 1 1 +ptg000001l 4777 4811 2 0 -1 0 2 +ptg000001l 4811 4854 2 0 -1 1 1 +ptg000001l 4854 4954 2 0 -1 2 0 +ptg000001l 4954 4968 2 0 -1 1 1 +ptg000001l 4968 4983 2 0 -1 0 2 +ptg000001l 4983 5159 2 0 -1 1 1 +ptg000001l 5159 5186 2 0 -1 0 2 +ptg000001l 5186 5229 2 0 -1 1 1 +ptg000001l 5229 5344 2 0 -1 2 0 +ptg000001l 5344 5365 2 0 -1 1 1 +ptg000001l 5365 5386 2 0 -1 2 0 +ptg000001l 5386 5463 2 0 -1 1 1 +ptg000001l 5463 5600 2 0 -1 2 0 +ptg000001l 5600 5658 2 0 -1 1 1 +ptg000001l 5658 5757 2 0 -1 2 0 +ptg000001l 5757 5799 2 0 -1 1 1 +ptg000001l 5799 5917 2 0 -1 2 0 +ptg000001l 5917 5928 2 0 -1 1 1 +ptg000001l 5928 5949 2 0 -1 2 0 +ptg000001l 5949 5986 2 0 -1 1 1 +ptg000001l 5986 6106 2 0 -1 2 0 +ptg000001l 6106 6131 2 0 -1 1 1 +ptg000001l 6131 6136 2 0 -1 0 2 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11832 3 0 -1 3 0 +ptg000001l 11832 11876 3 0 -1 2 1 +ptg000001l 11876 11892 3 0 -1 1 2 +ptg000001l 11892 11955 3 0 -1 2 1 +ptg000001l 11955 12030 3 0 -1 3 0 +ptg000001l 12030 12075 3 0 -1 2 1 +ptg000001l 12075 12076 3 0 -1 1 2 +ptg000001l 12076 12080 3 0 -1 2 1 +ptg000001l 12080 12226 3 0 -1 3 0 +ptg000001l 12226 12257 3 0 -1 2 1 +ptg000001l 12257 12278 3 0 -1 1 2 +ptg000001l 12278 12279 3 0 -1 0 3 +ptg000001l 12279 12282 3 0 -1 1 2 +ptg000001l 12282 12325 3 0 -1 2 1 +ptg000001l 12325 12397 3 0 -1 3 0 +ptg000001l 12397 12464 3 0 -1 2 1 +ptg000001l 12464 12468 3 0 -1 1 2 +ptg000001l 12468 12488 3 0 -1 0 3 +ptg000001l 12488 12494 3 0 -1 2 1 +ptg000001l 12494 12593 3 0 -1 3 0 +ptg000001l 12593 12625 3 0 -1 2 1 +ptg000001l 12625 12671 3 0 -1 1 2 +ptg000001l 12671 12691 3 0 -1 0 3 +ptg000001l 12691 12711 3 0 -1 2 1 +ptg000001l 12711 12802 3 0 -1 3 0 +ptg000001l 12802 12838 3 0 -1 2 1 +ptg000001l 12838 12843 3 0 -1 1 2 +ptg000001l 12843 12867 3 0 -1 2 1 +ptg000001l 12867 12870 3 0 -1 3 0 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79202 2 0 -1 1 1 +ptg000001l 79202 79252 2 0 -1 2 0 +ptg000001l 79252 79294 2 0 -1 1 1 +ptg000001l 79294 79385 2 0 -1 2 0 +ptg000001l 79385 79386 2 0 -1 1 1 +ptg000001l 79386 79454 2 0 -1 2 0 +ptg000001l 79454 79493 2 0 -1 1 1 +ptg000001l 79493 79663 2 0 -1 2 0 +ptg000001l 79663 79669 2 0 -1 1 1 +ptg000001l 79669 79670 2 0 -1 0 2 +ptg000001l 79670 79672 2 0 -1 1 1 +ptg000001l 79672 79923 2 0 -1 2 0 +ptg000001l 79923 79935 2 0 -1 1 1 +ptg000001l 79935 80036 2 0 -1 2 0 +ptg000001l 80036 80037 2 0 -1 1 1 +ptg000001l 80037 80076 2 0 -1 2 0 +ptg000001l 80076 80090 2 0 -1 1 1 +ptg000001l 80090 80237 2 0 -1 2 0 +ptg000001l 80237 80308 2 0 -1 1 1 +ptg000001l 80308 80390 2 0 -1 2 0 +ptg000001l 80390 80415 2 0 -1 1 1 +ptg000001l 80415 80436 2 0 -1 2 0 +ptg000001l 80436 80497 2 0 -1 1 1 +ptg000001l 80497 80587 2 0 -1 2 0 +ptg000001l 80587 80594 2 0 -1 1 1 +ptg000001l 80594 80649 2 0 -1 2 0 +ptg000001l 80649 80662 2 0 -1 1 1 +ptg000001l 80662 80840 2 0 -1 2 0 +ptg000001l 80840 80841 2 0 -1 1 1 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83141 1 0 -1 0 1 +ptg000001l 83141 83350 1 0 -1 1 0 +ptg000001l 83350 83356 1 0 -1 0 1 +ptg000001l 83356 83521 1 0 -1 1 0 +ptg000001l 83521 83569 1 0 -1 0 1 +ptg000001l 83569 83723 1 0 -1 1 0 +ptg000001l 83723 83804 1 0 -1 0 1 +ptg000001l 83804 83981 1 0 -1 1 0 +ptg000001l 83981 84010 1 0 -1 0 1 +ptg000001l 84010 84172 1 0 -1 1 0 +ptg000001l 84172 84186 1 0 -1 0 1 +ptg000001l 84186 84364 1 0 -1 1 0 +ptg000001l 84364 84404 1 0 -1 0 1 +ptg000001l 84404 84559 1 0 -1 1 0 +ptg000001l 84559 84580 1 0 -1 0 1 +ptg000001l 84580 84790 1 0 -1 1 0 +ptg000001l 84790 84813 1 0 -1 0 1 +ptg000001l 84813 85005 1 0 -1 1 0 +ptg000001l 85005 85042 1 0 -1 0 1 +ptg000001l 85042 85174 1 0 -1 1 0 +ptg000001l 85174 85222 1 0 -1 0 1 +ptg000001l 85222 85354 1 0 -1 1 0 +ptg000001l 85354 85457 1 0 -1 0 1 +ptg000001l 85457 85592 1 0 -1 1 0 +ptg000001l 85592 85658 1 0 -1 0 1 +ptg000001l 85658 85775 1 0 -1 1 0 +ptg000001l 85775 85810 1 0 -1 0 1 +ptg000001l 85810 86012 1 0 -1 1 0 +ptg000001l 86012 86038 1 0 -1 0 1 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89313 1 0 -1 1 0 +ptg000001l 89313 89322 1 0 -1 0 1 +ptg000001l 89322 89495 1 0 -1 1 0 +ptg000001l 89495 89524 1 0 -1 0 1 +ptg000001l 89524 89671 1 0 -1 1 0 +ptg000001l 89671 89755 1 0 -1 0 1 +ptg000001l 89755 89922 1 0 -1 1 0 +ptg000001l 89922 89924 1 0 -1 0 1 +ptg000001l 89924 90296 1 0 -1 1 0 +ptg000001l 90296 90339 1 0 -1 0 1 +ptg000001l 90339 90482 1 0 -1 1 0 +ptg000001l 90482 90524 1 0 -1 0 1 +ptg000001l 90524 90683 1 0 -1 1 0 +ptg000001l 90683 90765 1 0 -1 0 1 +ptg000001l 90765 90912 1 0 -1 1 0 +ptg000001l 90912 90919 1 0 -1 0 1 +ptg000001l 90919 91104 1 0 -1 1 0 +ptg000001l 91104 91173 1 0 -1 0 1 +ptg000001l 91173 91324 1 0 -1 1 0 +ptg000001l 91324 91344 1 0 -1 0 1 +ptg000001l 91344 91506 1 0 -1 1 0 +ptg000001l 91506 91570 1 0 -1 0 1 +ptg000001l 91570 91735 1 0 -1 1 0 +ptg000001l 91735 91744 1 0 -1 0 1 +ptg000001l 91744 91909 1 0 -1 1 0 +ptg000001l 91909 91942 1 0 -1 0 1 +ptg000001l 91942 92038 1 0 -1 0 0 diff --git a/tests/regression/snapshots/regression__pileup__pileup_m6a.snap b/tests/regression/snapshots/regression__pileup__pileup_m6a.snap new file mode 100644 index 00000000..cc338e38 --- /dev/null +++ b/tests/regression/snapshots/regression__pileup__pileup_m6a.snap @@ -0,0 +1,26643 @@ +--- +source: tests/regression/pileup.rs +expression: "select_tsv_cols(&out,\n&[\"#chrom\", \"start\", \"end\", \"coverage\", \"fire_coverage\", \"score\",\n\"nuc_coverage\", \"msp_coverage\", \"m6a_coverage\",])" +--- +#chrom start end coverage fire_coverage score nuc_coverage msp_coverage m6a_coverage +ptg000001l 306 318 1 0 -1 0 0 0 +ptg000001l 318 319 1 0 -1 0 0 1 +ptg000001l 319 326 1 0 -1 0 0 0 +ptg000001l 326 327 1 0 -1 0 0 1 +ptg000001l 327 331 1 0 -1 0 0 0 +ptg000001l 331 332 1 0 -1 0 0 1 +ptg000001l 332 334 1 0 -1 0 0 0 +ptg000001l 334 335 1 0 -1 0 0 1 +ptg000001l 335 466 1 0 -1 0 0 0 +ptg000001l 466 467 1 0 -1 0 1 1 +ptg000001l 467 472 1 0 -1 0 1 0 +ptg000001l 472 473 1 0 -1 0 1 1 +ptg000001l 473 484 1 0 -1 0 1 0 +ptg000001l 484 485 1 0 -1 0 1 1 +ptg000001l 485 489 1 0 -1 0 1 0 +ptg000001l 489 490 1 0 -1 0 1 1 +ptg000001l 490 617 1 0 -1 1 0 0 +ptg000001l 617 618 1 0 -1 0 1 1 +ptg000001l 618 619 1 0 -1 0 1 0 +ptg000001l 619 620 1 0 -1 0 1 1 +ptg000001l 620 629 1 0 -1 0 1 0 +ptg000001l 629 630 1 0 -1 0 1 1 +ptg000001l 630 632 1 0 -1 0 1 0 +ptg000001l 632 633 1 0 -1 0 1 1 +ptg000001l 633 634 1 0 -1 0 1 0 +ptg000001l 634 635 1 0 -1 0 1 1 +ptg000001l 635 636 1 0 -1 0 1 0 +ptg000001l 636 637 1 0 -1 0 1 1 +ptg000001l 637 641 1 0 -1 0 1 0 +ptg000001l 641 642 1 0 -1 0 1 1 +ptg000001l 642 644 1 0 -1 0 1 0 +ptg000001l 644 647 1 0 -1 0 1 1 +ptg000001l 647 648 1 0 -1 0 1 0 +ptg000001l 648 649 1 0 -1 0 1 1 +ptg000001l 649 652 1 0 -1 0 1 0 +ptg000001l 652 653 1 0 -1 0 1 1 +ptg000001l 653 655 1 0 -1 0 1 0 +ptg000001l 655 657 1 0 -1 0 1 1 +ptg000001l 657 658 1 0 -1 0 1 0 +ptg000001l 658 659 1 0 -1 0 1 1 +ptg000001l 659 660 1 0 -1 0 1 0 +ptg000001l 660 662 1 0 -1 0 1 1 +ptg000001l 662 663 1 0 -1 0 1 0 +ptg000001l 663 665 1 0 -1 0 1 1 +ptg000001l 665 666 1 0 -1 0 1 0 +ptg000001l 666 669 1 0 -1 0 1 1 +ptg000001l 669 670 1 0 -1 0 1 0 +ptg000001l 670 671 1 0 -1 0 1 1 +ptg000001l 671 672 1 0 -1 0 1 0 +ptg000001l 672 675 1 0 -1 0 1 1 +ptg000001l 675 677 1 0 -1 0 1 0 +ptg000001l 677 679 1 0 -1 0 1 1 +ptg000001l 679 680 1 0 -1 0 1 0 +ptg000001l 680 681 1 0 -1 0 1 1 +ptg000001l 681 683 1 0 -1 0 1 0 +ptg000001l 683 686 1 0 -1 0 1 1 +ptg000001l 686 688 1 0 -1 0 1 0 +ptg000001l 688 690 1 0 -1 0 1 1 +ptg000001l 690 691 1 0 -1 0 1 0 +ptg000001l 691 692 1 0 -1 0 1 1 +ptg000001l 692 693 1 0 -1 0 1 0 +ptg000001l 693 694 1 0 -1 0 1 1 +ptg000001l 694 695 1 0 -1 0 1 0 +ptg000001l 695 697 1 0 -1 0 1 1 +ptg000001l 697 815 1 0 -1 1 0 0 +ptg000001l 815 816 1 0 -1 0 1 1 +ptg000001l 816 817 1 0 -1 0 1 0 +ptg000001l 817 818 1 0 -1 0 1 1 +ptg000001l 818 822 1 0 -1 0 1 0 +ptg000001l 822 823 1 0 -1 0 1 1 +ptg000001l 823 830 1 0 -1 0 1 0 +ptg000001l 830 831 1 0 -1 0 1 1 +ptg000001l 831 832 1 0 -1 0 1 0 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diff --git a/tests/regression/snapshots/regression__pileup__pileup_no_msp.snap b/tests/regression/snapshots/regression__pileup__pileup_no_msp.snap new file mode 100644 index 00000000..a09b68bb --- /dev/null +++ b/tests/regression/snapshots/regression__pileup__pileup_no_msp.snap @@ -0,0 +1,3391 @@ +--- +source: tests/regression/pileup.rs +expression: "select_tsv_cols(&out,\n&[\"#chrom\", \"start\", \"end\", \"coverage\", \"fire_coverage\", \"score\",\n\"nuc_coverage\",])" +--- +#chrom start end coverage fire_coverage score nuc_coverage +ptg000001l 306 490 1 0 -1 0 +ptg000001l 490 617 1 0 -1 1 +ptg000001l 617 697 1 0 -1 0 +ptg000001l 697 815 1 0 -1 1 +ptg000001l 815 832 1 0 -1 0 +ptg000001l 832 927 2 0 -1 0 +ptg000001l 927 986 2 0 -1 1 +ptg000001l 986 1043 2 0 -1 2 +ptg000001l 1043 1160 2 0 -1 1 +ptg000001l 1160 1161 2 0 -1 0 +ptg000001l 1161 1186 2 0 -1 1 +ptg000001l 1186 1307 2 0 -1 2 +ptg000001l 1307 1342 2 0 -1 1 +ptg000001l 1342 1363 2 0 -1 0 +ptg000001l 1363 1364 2 0 -1 1 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a/tests/regression/snapshots/regression__pileup__pileup_no_nuc.snap b/tests/regression/snapshots/regression__pileup__pileup_no_nuc.snap new file mode 100644 index 00000000..3e7159e7 --- /dev/null +++ b/tests/regression/snapshots/regression__pileup__pileup_no_nuc.snap @@ -0,0 +1,3410 @@ +--- +source: tests/regression/pileup.rs +expression: "select_tsv_cols(&out,\n&[\"#chrom\", \"start\", \"end\", \"coverage\", \"fire_coverage\", \"score\",\n\"msp_coverage\",])" +--- +#chrom start end coverage fire_coverage score msp_coverage +ptg000001l 306 466 1 0 -1 0 +ptg000001l 466 490 1 0 -1 1 +ptg000001l 490 617 1 0 -1 0 +ptg000001l 617 697 1 0 -1 1 +ptg000001l 697 815 1 0 -1 0 +ptg000001l 815 832 1 0 -1 1 +ptg000001l 832 927 2 0 -1 1 +ptg000001l 927 985 2 0 -1 0 +ptg000001l 985 986 2 0 -1 1 +ptg000001l 986 1043 2 0 -1 0 +ptg000001l 1043 1160 2 0 -1 1 +ptg000001l 1160 1161 2 0 -1 2 +ptg000001l 1161 1186 2 0 -1 1 +ptg000001l 1186 1307 2 0 -1 0 +ptg000001l 1307 1342 2 0 -1 1 +ptg000001l 1342 1363 2 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