DESCRIPTION

Package: TRESS
Type: Package
Title: Toolbox for mRNA epigenetics sequencing analysis
Version: 0.99.1
Authors@R: c(person(given = "Zhenxing",
                    family = "Guo",
                    role = c("aut", "cre"),
                    email = "zhenxing.guo@emory.edu"),
            person(given = "Hao",
                   family = "Wu",
                   role = "ctb"))
Description: This package is devoted to analyzing MeRIP-seq data. Current functionalities include 1. detect transcriptome wide m6A methylation regions 2. detect transcriptome wide differential m6A methylation regions.
Imports: 
    utils,
    rtracklayer,
    Matrix,
    matrixStats,
    stats,
    methods,
    graphics,
    GenomicRanges,
    GenomicFeatures, 
    IRanges,
    Rsamtools,
    AnnotationDbi
Depends: R (>= 4.0), parallel, S4Vectors
biocViews: Epigenetics, RNASeq, PeakDetection, DifferentialMethylation
License: CC0
Encoding: UTF-8
LazyData: false
Suggests: knitr, rmarkdown,BiocStyle
VignetteBuilder: knitr
RoxygenNote: 7.1.1