padaco/machineLearningNotes.txt at master · informaton/padaco · GitHub

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# Database build

Shell
0. cd ~/git/padaco/utility
1. ln -s ~/git/sev/CLASSES/CLASS_database.m .

MySQL
0. mysql -uRootUser -p
1. set password policy as necessary for the class database goals password.
    * mysql> show variables like "validate_password%";
    * mysql> set GLOBAL validate_password_policy=LOW;  # Or not

MATLAB
0. db = CLASS_database_goals()
1. db.createDBandTables()
   * subject_outcomes.csv --> subject information
   * outcomes_dictionary.csv --> definition and labels
   * padaco_summary.csv --> load shape information

# Notes
Use the output from
CONTROLLER.resultsPathname	/Users/unknown/Data/GOALS/output/output_8_19_2015


Then, click <- and -> arrows to get what you want.


Here's how this branch works differently:

padaco.fig handles:
    panel_coiControls
        edit_coiStatus
    panel_centroidProfiles
        tabel_centroidProfiles

PA_StatTool.m
    function didRefresh = refreshProfileTableData(this)
    function didRefresh = refreshCOIProfile(this)
    function didRefresh = refreshGlobalProfile(this)
  Static:
    ? function featureStruct = discardNonWearFeatures(featureStructIn,usageStateStruct) ?
    function [coiProfile, dataSummaryStruct] = getProfileCell(primaryKeys,fieldsOfInterest)
    function profileCell = profile2cell(profileStruct)
./
CLASS_database.m
EventData_BatchTool - eventData class
deriveCounts.m
extractLoadShapeFeatures

./utility/
    CLASS_database_goals.m
    pa_randperm
./utility/lib/
    libmysqlsclient libraries and plug ins.

Model/
    model_summary.m
    table_summary.m
    gee_model.m
    mym.m

Utility/

CLASS_database_goals.m
cells2cell.m
cells2mat.m
dissolve.m
fitTable.m
getFilenamesi.m
getPathnames.m
getSelectedMenuString.m
getSelectedMenuUserData.m
lib
libmysqlclient.18.dylib
pa_randperm.m
screencap.m
showME.m
struct2array.m
uigetfulldir.m
uigetfullfile.m

Files:

CLASS_database.m
EventData_BatchTool.m
LICENSE
PABatchTool.m
PACentroid.m
PACentroid.m~
PAController.m
PAData.m
PASettings.m
PAStatTool.m
PAStatTool.m~
PAView.m
Padaco.prj
README.md
_padaco.parameters.txt
archive
batchTool.fig
batchTool.m
batch_results.txt
deriveCounts.m
extractLoadShapeFeatures.m
go2padaco.m
huh
libmysqlclient.18.dylib
machineLearningNotes.txt
matlab.mat
matlab_workspace.mat
mergeCentroids.m
model
output
padaco.fig
padaco.m
resetDlg.m
restart.m
utility