fixed the issue of .contree file not showing the bootstrap values when -v and -mem options are used

thomaskf · thomaskf · commit cd29bd678792 · 2024-03-12T18:19:45.000+11:00
diff --git a/tree/phylotree.cpp b/tree/phylotree.cpp
@@ -5994,11 +5994,13 @@ bool PhyloTree::computeTraversalInfo(PhyloNeighbor *dad_branch, PhyloNode *dad,
         mem_slots.update(dad_branch);
     }
 
+    /*
     if (verbose_mode >= VB_MED && params->lh_mem_save == LM_MEM_SAVE) {
         int slot_id = mem_slots.findNei(dad_branch) - mem_slots.begin();
         node->name = convertIntToString(slot_id);
         //cout << "Branch " << dad->id << "-" << node->id << " assigned slot " << slot_id << endl;
     }
+    */
 
     if (params->lh_mem_save == LM_MEM_SAVE) {
         for (it = neivec.begin(); it != neivec.end(); it++) {

Original file line number	Diff line number	Diff line change
`@@ -5994,11 +5994,13 @@ bool PhyloTree::computeTraversalInfo(PhyloNeighbor dad_branch, PhyloNode dad,`
`5994`	`5994`	`mem_slots.update(dad_branch);`
`5995`	`5995`	`}`
`5996`	`5996`
	`5997`	`+ /*`
`5997`	`5998`	`if (verbose_mode >= VB_MED && params->lh_mem_save == LM_MEM_SAVE) {`
`5998`	`5999`	`int slot_id = mem_slots.findNei(dad_branch) - mem_slots.begin();`
`5999`	`6000`	`node->name = convertIntToString(slot_id);`
`6000`	`6001`	`//cout << "Branch " << dad->id << "-" << node->id << " assigned slot " << slot_id << endl;`
`6001`	`6002`	`}`
	`6003`	`+ */`
`6002`	`6004`
`6003`	`6005`	`if (params->lh_mem_save == LM_MEM_SAVE) {`
`6004`	`6006`	`for (it = neivec.begin(); it != neivec.end(); it++) {`