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Hello!
I've been running into problems when trying to compute differential interactions in a merged CellChat object.
> netVisual_diffInteraction(cellchat, weight.scale = T, sources.use = 1, targets.use = 2,
+ measure = "count.merged", label.edge = T)
Error in names(x) <- value :
'names' attribute [2] must be the same length as the vector [1]
The one difference in CellChat object structure I can see is my object is structured cellchat@net$experimental$count instead of just cellchat@net$control$count. There is also a nonzero number of valid connections:
> cellchat@net$control$count[1,2]
[1] 14
> cellchat@net$experimental$count[1,2]
[1] 10
Let me know if there's any other information you need from me. Thanks in advance!
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