DESCRIPTION

Package: SpatialCellChat
Type: Package
Title: Inference and analysis of cell-cell communication from spatial transcriptomics data
Version: 0.1.0
Author: Suoqin Jin, Xiangzheng Cheng, Ye Su
Maintainer: Xiangzheng Cheng <xzcheng@whu.edu.cn>, Suoqin Jin <suoqin.jin@gmail.com>
Description: an open source R tool that infers, visualizes and analyzes the cell-cell communication networks from spatial transcriptomics data.
Depends: R (>= 4.3.0), dplyr, igraph
License: GPL-3
Encoding: UTF-8
LazyData: true
Imports: ALRA, cli, colorspace, sf, purrr, stringr, future, future.apply, pbapply,
        irlba, NMF (>= 0.23.0), ggalluvial, svglite, Matrix, MERINGUE,
        ggrepel, ggplot2, circlize (>= 0.4.12), RColorBrewer,
        cowplot, methods, ComplexHeatmap, RSpectra, Rfast, Rcpp,
        reticulate, scales, sna, forcats, reshape2, FNN,
        shape, Seurat (>= 4.0.0), spatstat.sparse, magrittr, patchwork, plyr, ggpubr,
        ggnetwork, BiocGenerics, BiocNeighbors, ggnewscale, progressr, uwot, ks, rlang
LinkingTo: Rcpp, RcppEigen
Suggests: rmarkdown, knitr, roxygen2, SingleCellExperiment,
        SummarizedExperiment, gg.gap, wordcloud, raster, 
        SeuratObject, metR, oce, plotly, rstudioapi, scattermore, shiny, spdep, tidyr,
        RcppML, gtools, scatterpie, rliger, SNFtool, pryr, RcppEigen, Rtsne, expm, progress
RoxygenNote: 7.3.2
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2026-02